RNA–Protein interactions for RNA: ENST00000375597.8

MCF2L-202, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-202ENST00000375597 C16orf46Q6P387 395 aa12.39□□□□□ -0.43
MCF2L-202ENST00000375597 BTNL9Q6UXG8 535 aa12.39□□□□□ -0.43
MCF2L-202ENST00000375597 TRABD2AQ86V40 505 aa12.39□□□□□ -0.43
MCF2L-202ENST00000375597 FBXO27Q8NI29 283 aa12.39□□□□□ -0.43
MCF2L-202ENST00000375597 JOSD2Q8TAC2 188 aa12.39□□□□□ -0.43
MCF2L-202ENST00000375597 ZNF606Q8WXB4 792 aa12.39□□□□□ -0.43
MCF2L-202ENST00000375597 DNAJC9Q8WXX5 260 aa12.39□□□□□ -0.43
MCF2L-202ENST00000375597 L3MBTL3Q96JM7 780 aaPredicted RBP12.39□□□□□ -0.43
MCF2L-202ENST00000375597 MMP19Q99542 508 aa12.39□□□□□ -0.43
MCF2L-202ENST00000375597 ROPN1BQ9BZX4 212 aaPredicted RBP12.39□□□□□ -0.43
MCF2L-202ENST00000375597 ROPN1Q9HAT0 212 aaPredicted RBP12.39□□□□□ -0.43
MCF2L-202ENST00000375597 TMX2Q9Y320 296 aa12.39□□□□□ -0.43
MCF2L-202ENST00000375597 TTLL3Q9Y4R7 772 aa12.39□□□□□ -0.43
MCF2L-202ENST00000375597 ATXN2Q99700 1313 aaKnown RBP12.39□□□□□ -0.43
MCF2L-202ENST00000375597 B2RBV5 119 aa12.39□□□□□ -0.43
MCF2L-202ENST00000375597 TJP3O95049 919 aa12.39□□□□□ -0.43
MCF2L-202ENST00000375597 ADRA2BP18089 450 aa12.39□□□□□ -0.43
MCF2L-202ENST00000375597 CAP2P40123 477 aa12.39□□□□□ -0.43
MCF2L-202ENST00000375597 FAAP100Q0VG06 881 aa12.39□□□□□ -0.43
MCF2L-202ENST00000375597 ZNF268Q14587 947 aaPredicted RBP12.39□□□□□ -0.43
MCF2L-202ENST00000375597 TATDN1Q6P1N9 297 aa12.39□□□□□ -0.43
MCF2L-202ENST00000375597 CES3Q6UWW8 571 aa12.39□□□□□ -0.43
MCF2L-202ENST00000375597 UNC45BQ8IWX7 931 aa12.39□□□□□ -0.43
MCF2L-202ENST00000375597 MOCOSQ96EN8 888 aa12.39□□□□□ -0.43
MCF2L-202ENST00000375597 TSC22D3Q99576 134 aa12.39□□□□□ -0.43
MCF2L-202ENST00000375597 RAB6BQ9NRW1 208 aa12.39□□□□□ -0.43
MCF2L-202ENST00000375597 TNRC6CQ9HCJ0 1690 aaKnown RBP12.39□□□□□ -0.43
MCF2L-202ENST00000375597 PDE5AO76074 875 aa12.39□□□□□ -0.43
MCF2L-202ENST00000375597 NR3C2P08235 984 aa12.39□□□□□ -0.43
MCF2L-202ENST00000375597 GSTA1P08263 222 aa12.39□□□□□ -0.43
MCF2L-202ENST00000375597 DRG2P55039 364 aaKnown RBP12.39□□□□□ -0.43
MCF2L-202ENST00000375597 PTK7Q13308 1070 aa12.39□□□□□ -0.43
MCF2L-202ENST00000375597 CUL2Q13617 745 aa12.39□□□□□ -0.43
MCF2L-202ENST00000375597 PTK6Q13882 451 aa12.39□□□□□ -0.43
MCF2L-202ENST00000375597 WDR72Q3MJ13 1102 aa12.39□□□□□ -0.43
MCF2L-202ENST00000375597 GBP7Q8N8V2 638 aaPredicted RBP12.39□□□□□ -0.43
MCF2L-202ENST00000375597 EIF1ADQ8N9N8 165 aaKnown RBP12.39□□□□□ -0.43
MCF2L-202ENST00000375597 GMCL1P1Q8NEA9 526 aa12.39□□□□□ -0.43
MCF2L-202ENST00000375597 FEZF2Q8TBJ5 459 aa12.39□□□□□ -0.43
MCF2L-202ENST00000375597 P3H4Q92791 437 aa12.39□□□□□ -0.43
MCF2L-202ENST00000375597 FAF2Q96CS3 445 aa12.39□□□□□ -0.43
MCF2L-202ENST00000375597 APOL6Q9BWW8 343 aa12.39□□□□□ -0.43
MCF2L-202ENST00000375597 TMEM120AQ9BXJ8 343 aa12.39□□□□□ -0.43
MCF2L-202ENST00000375597 MIS12Q9H081 205 aa12.39□□□□□ -0.43
MCF2L-202ENST00000375597 INPP5FQ9Y2H2 1132 aa12.39□□□□□ -0.43
MCF2L-202ENST00000375597 PCDHA10Q9Y5I2 948 aa12.39□□□□□ -0.43
MCF2L-202ENST00000375597 ZNF541Q9H0D2 1346 aa12.38□□□□□ -0.43
MCF2L-202ENST00000375597 PIK3CDO00329 1044 aa12.38□□□□□ -0.43
MCF2L-202ENST00000375597 OPHN1O60890 802 aa12.38□□□□□ -0.43
MCF2L-202ENST00000375597 TMEM191BP0C7N4 346 aa12.38□□□□□ -0.43
MCF2L-202ENST00000375597 RBP3P10745 1247 aa12.38□□□□□ -0.43
MCF2L-202ENST00000375597 ELK3P41970 407 aa12.38□□□□□ -0.43
MCF2L-202ENST00000375597 NOVP48745 357 aa12.38□□□□□ -0.43
MCF2L-202ENST00000375597 KBTBD12Q3ZCT8 623 aa12.38□□□□□ -0.43
MCF2L-202ENST00000375597 RASIP1Q5U651 963 aa12.38□□□□□ -0.43
MCF2L-202ENST00000375597 CROCCP2Q86T23 111 aa12.38□□□□□ -0.43
MCF2L-202ENST00000375597 C7orf31Q8N865 590 aa12.38□□□□□ -0.43
MCF2L-202ENST00000375597 C3orf20Q8ND61 904 aa12.38□□□□□ -0.43
MCF2L-202ENST00000375597 SPATA18Q8TC71 538 aa12.38□□□□□ -0.43
MCF2L-202ENST00000375597 WDR60Q8WVS4 1066 aa12.38□□□□□ -0.43
MCF2L-202ENST00000375597 SENP7Q9BQF6 1050 aa12.38□□□□□ -0.43
MCF2L-202ENST00000375597 ASCC2Q9H1I8 757 aaPredicted RBP12.38□□□□□ -0.43
MCF2L-202ENST00000375597 GGA2Q9UJY4 613 aa12.38□□□□□ -0.43
MCF2L-202ENST00000375597 FIS1Q9Y3D6 152 aa12.38□□□□□ -0.43
MCF2L-202ENST00000375597 GGPS1O95749 300 aa12.38□□□□□ -0.43
MCF2L-202ENST00000375597 ANXA13P27216 316 aa12.38□□□□□ -0.43
MCF2L-202ENST00000375597 GTF2A2P52657 109 aa12.38□□□□□ -0.43
MCF2L-202ENST00000375597 PGGT1BP53609 377 aa12.38□□□□□ -0.43
MCF2L-202ENST00000375597 EIF3EP60228 445 aaKnown RBP12.38□□□□□ -0.43
MCF2L-202ENST00000375597 PGM5Q15124 567 aa12.38□□□□□ -0.43
MCF2L-202ENST00000375597 UNC5BQ8IZJ1 945 aa12.38□□□□□ -0.43
MCF2L-202ENST00000375597 CCDC110Q8TBZ0 833 aa12.38□□□□□ -0.43
MCF2L-202ENST00000375597 CERKQ8TCT0 537 aa12.38□□□□□ -0.43
MCF2L-202ENST00000375597 DDX1Q92499 740 aaKnown RBP12.38□□□□□ -0.43
MCF2L-202ENST00000375597 TRIM55Q9BYV6 548 aa12.38□□□□□ -0.43
MCF2L-202ENST00000375597 MRPL47Q9HD33 250 aaKnown RBP12.38□□□□□ -0.43
MCF2L-202ENST00000375597 SPATS2LQ9NUQ6 558 aaKnown RBP12.38□□□□□ -0.43
MCF2L-202ENST00000375597 SLC5A4Q9NY91 659 aa12.38□□□□□ -0.43
MCF2L-202ENST00000375597 BRCA2P51587 3418 aa12.38□□□□□ -0.43
MCF2L-202ENST00000375597 MYPNQ86TC9 1320 aa12.38□□□□□ -0.43
MCF2L-202ENST00000375597 TRIM49D1C9J1S8 452 aa12.37□□□□□ -0.43
MCF2L-202ENST00000375597 DHX15O43143 795 aaKnown RBP12.37□□□□□ -0.43
MCF2L-202ENST00000375597 PGM1P36871 562 aa12.37□□□□□ -0.43
MCF2L-202ENST00000375597 CDH6P55285 790 aa12.37□□□□□ -0.43
MCF2L-202ENST00000375597 C15orf59Q2T9L4 293 aaPredicted RBP12.37□□□□□ -0.43
MCF2L-202ENST00000375597 SNX30Q5VWJ9 437 aa12.37□□□□□ -0.43
MCF2L-202ENST00000375597 SPOCD1Q6ZMY3 1216 aa12.37□□□□□ -0.43
MCF2L-202ENST00000375597 CCNJLQ8IV13 435 aa12.37□□□□□ -0.43
MCF2L-202ENST00000375597 SPNS2Q8IVW8 549 aa12.37□□□□□ -0.43
MCF2L-202ENST00000375597 PDIK1LQ8N165 341 aa12.37□□□□□ -0.43
MCF2L-202ENST00000375597 RNF148Q8N7C7 305 aa12.37□□□□□ -0.43
MCF2L-202ENST00000375597 MAGEB5Q9BZ81 275 aa12.37□□□□□ -0.43
MCF2L-202ENST00000375597 MANSC1Q9H8J5 431 aa12.37□□□□□ -0.43
MCF2L-202ENST00000375597 RNPEPL1Q9HAU8 725 aa12.37□□□□□ -0.43
MCF2L-202ENST00000375597 COL5A3P25940 1745 aaPredicted RBP12.37□□□□□ -0.43
MCF2L-202ENST00000375597 KBTBD13C9JR72 458 aa12.37□□□□□ -0.43
MCF2L-202ENST00000375597 NVLO15381 856 aaKnown RBP12.37□□□□□ -0.43
MCF2L-202ENST00000375597 LIASO43766 372 aa12.37□□□□□ -0.43
MCF2L-202ENST00000375597 PEX11AO75192 247 aa12.37□□□□□ -0.43
MCF2L-202ENST00000375597 AMPD1P23109 780 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms