RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 AGO2Q9UKV8 859 aaKnown RBP10.6□□□□□ -0.71
PTCH1-204ENST00000375290 TGM2P21980 687 aa10.6□□□□□ -0.71
PTCH1-204ENST00000375290 TARSP26639 723 aaKnown RBP10.6□□□□□ -0.71
PTCH1-204ENST00000375290 SLC10A5Q5PT55 438 aa10.6□□□□□ -0.71
PTCH1-204ENST00000375290 FOPNLQ96NB1 174 aa10.6□□□□□ -0.71
PTCH1-204ENST00000375290 MUC13Q9H3R2 512 aa10.6□□□□□ -0.71
PTCH1-204ENST00000375290 CAAP1Q9H8G2 361 aa10.6□□□□□ -0.71
PTCH1-204ENST00000375290 HSPBP1Q9NZL4 362 aa10.6□□□□□ -0.71
PTCH1-204ENST00000375290 CHMP2BQ9UQN3 213 aa10.6□□□□□ -0.71
PTCH1-204ENST00000375290 TPRKBQ9Y3C4 175 aa10.6□□□□□ -0.71
PTCH1-204ENST00000375290 SETD1BQ9UPS6 1966 aaKnown RBP10.6□□□□□ -0.71
PTCH1-204ENST00000375290 CEMIPQ8WUJ3 1361 aa10.6□□□□□ -0.71
PTCH1-204ENST00000375290 DENND3A2RUS2 1198 aa10.6□□□□□ -0.71
PTCH1-204ENST00000375290 RPL26P61254 145 aaKnown RBP10.6□□□□□ -0.71
PTCH1-204ENST00000375290 FAM102AQ5T9C2 384 aaPredicted RBP10.6□□□□□ -0.71
PTCH1-204ENST00000375290 PDPRQ8NCN5 879 aa10.6□□□□□ -0.71
PTCH1-204ENST00000375290 DKK3Q9UBP4 350 aa10.6□□□□□ -0.71
PTCH1-204ENST00000375290 NWD1Q149M9 1564 aa10.6□□□□□ -0.71
PTCH1-204ENST00000375290 ZNF844Q08AG5 666 aa10.6□□□□□ -0.71
PTCH1-204ENST00000375290 PRKAA1Q13131 559 aa10.6□□□□□ -0.71
PTCH1-204ENST00000375290 DEPDC1Q5TB30 811 aa10.6□□□□□ -0.71
PTCH1-204ENST00000375290 KCTD1Q719H9 257 aa10.6□□□□□ -0.71
PTCH1-204ENST00000375290 ACMSDQ8TDX5 336 aa10.6□□□□□ -0.71
PTCH1-204ENST00000375290 AIFM3Q96NN9 605 aa10.6□□□□□ -0.71
PTCH1-204ENST00000375290 HINFPQ9BQA5 517 aa10.6□□□□□ -0.71
PTCH1-204ENST00000375290 PCIF1Q9H4Z3 704 aa10.6□□□□□ -0.71
PTCH1-204ENST00000375290 KCNN4O15554 427 aa10.6□□□□□ -0.71
PTCH1-204ENST00000375290 C21orf2O43822 256 aa10.6□□□□□ -0.71
PTCH1-204ENST00000375290 FASP25445 335 aa10.6□□□□□ -0.71
PTCH1-204ENST00000375290 CDC25AP30304 524 aa10.6□□□□□ -0.71
PTCH1-204ENST00000375290 CRKLP46109 303 aaKnown RBP10.6□□□□□ -0.71
PTCH1-204ENST00000375290 CHRNB3Q05901 458 aa10.6□□□□□ -0.71
PTCH1-204ENST00000375290 DMC1Q14565 340 aa10.6□□□□□ -0.71
PTCH1-204ENST00000375290 ZC3H12BQ5HYM0 836 aaKnown RBP10.6□□□□□ -0.71
PTCH1-204ENST00000375290 SPDYAQ5MJ70 313 aa10.6□□□□□ -0.71
PTCH1-204ENST00000375290 MYLK4Q86YV6 388 aaPredicted RBP10.6□□□□□ -0.71
PTCH1-204ENST00000375290 HEMGNQ9BXL5 484 aa10.6□□□□□ -0.71
PTCH1-204ENST00000375290 PUS3Q9BZE2 481 aaKnown RBP10.6□□□□□ -0.71
PTCH1-204ENST00000375290 RMND5AQ9H871 391 aa10.6□□□□□ -0.71
PTCH1-204ENST00000375290 WEE2P0C1S8 567 aa10.59□□□□□ -0.71
PTCH1-204ENST00000375290 HNRNPH3P31942 346 aaKnown RBP10.59□□□□□ -0.71
PTCH1-204ENST00000375290 PNPLA4P41247 253 aa10.59□□□□□ -0.71
PTCH1-204ENST00000375290 C1orf54Q8WWF1 131 aa10.59□□□□□ -0.71
PTCH1-204ENST00000375290 APOPT1Q96IL0 206 aa10.59□□□□□ -0.71
PTCH1-204ENST00000375290 PCYOX1Q9UHG3 505 aa10.59□□□□□ -0.71
PTCH1-204ENST00000375290 COMTP21964 271 aa10.59□□□□□ -0.71
PTCH1-204ENST00000375290 ERVK-24P63145 666 aa10.59□□□□□ -0.71
PTCH1-204ENST00000375290 TTI2Q6NXR4 508 aa10.59□□□□□ -0.71
PTCH1-204ENST00000375290 GTF3C2Q8WUA4 911 aaPredicted RBP10.59□□□□□ -0.71
PTCH1-204ENST00000375290 CYGBQ8WWM9 190 aa10.59□□□□□ -0.71
PTCH1-204ENST00000375290 GINS4Q9BRT9 223 aa10.59□□□□□ -0.71
PTCH1-204ENST00000375290 PLGRKTQ9HBL7 147 aa10.59□□□□□ -0.71
PTCH1-204ENST00000375290 TSPY1Q01534 308 aa10.59□□□□□ -0.71
PTCH1-204ENST00000375290 ITGB3BPQ13352 177 aaPredicted RBP10.59□□□□□ -0.71
PTCH1-204ENST00000375290 CCDC33Q8N5R6 958 aa10.59□□□□□ -0.71
PTCH1-204ENST00000375290 RNF25Q96BH1 459 aaPredicted RBP10.59□□□□□ -0.71
PTCH1-204ENST00000375290 NXF1Q9UBU9 619 aaKnown RBP10.59□□□□□ -0.71
PTCH1-204ENST00000375290 AKT3Q9Y243 479 aa10.59□□□□□ -0.71
PTCH1-204ENST00000375290 RIPK2O43353 540 aa10.59□□□□□ -0.71
PTCH1-204ENST00000375290 SLC2A3P11169 496 aa10.59□□□□□ -0.71
PTCH1-204ENST00000375290 TTC23LQ6PF05 361 aa10.59□□□□□ -0.71
PTCH1-204ENST00000375290 DNAJB4Q9UDY4 337 aa10.59□□□□□ -0.71
PTCH1-204ENST00000375290 AAR2Q9Y312 384 aaKnown RBP10.59□□□□□ -0.71
PTCH1-204ENST00000375290 CCDC166P0CW27 439 aa10.59□□□□□ -0.71
PTCH1-204ENST00000375290 GRIK1P39086 918 aa10.59□□□□□ -0.71
PTCH1-204ENST00000375290 KCNMA1Q12791 1236 aa10.59□□□□□ -0.71
PTCH1-204ENST00000375290 XKR3Q5GH77 459 aa10.59□□□□□ -0.71
PTCH1-204ENST00000375290 MINDY2Q8NBR6 621 aa10.59□□□□□ -0.71
PTCH1-204ENST00000375290 CDC42EP4Q9H3Q1 356 aaKnown RBP10.59□□□□□ -0.71
PTCH1-204ENST00000375290 CENPXA8MT69 81 aa10.59□□□□□ -0.71
PTCH1-204ENST00000375290 VWA5AO00534 786 aa10.59□□□□□ -0.71
PTCH1-204ENST00000375290 EXTL3O43909 919 aa10.59□□□□□ -0.71
PTCH1-204ENST00000375290 TALDO1P37837 337 aa10.59□□□□□ -0.71
PTCH1-204ENST00000375290 CACHD1Q5VU97 1274 aa10.59□□□□□ -0.71
PTCH1-204ENST00000375290 NAIF1Q69YI7 327 aaPredicted RBP10.59□□□□□ -0.71
PTCH1-204ENST00000375290 MARK2Q7KZI7 788 aaKnown RBP10.59□□□□□ -0.71
PTCH1-204ENST00000375290 PNPT1Q8TCS8 783 aaKnown RBP10.59□□□□□ -0.71
PTCH1-204ENST00000375290 AVENQ9NQS1 362 aaPredicted RBP10.59□□□□□ -0.71
PTCH1-204ENST00000375290 SAGE2PA6NJ88 616 aa10.59□□□□□ -0.71
PTCH1-204ENST00000375290 PRKCIP41743 596 aa10.59□□□□□ -0.71
PTCH1-204ENST00000375290 ACAD10Q6JQN1 1059 aa10.59□□□□□ -0.71
PTCH1-204ENST00000375290 METTL5Q9NRN9 209 aaKnown RBP10.59□□□□□ -0.71
PTCH1-204ENST00000375290 SOAT2O75908 522 aa10.59□□□□□ -0.71
PTCH1-204ENST00000375290 YWHABP31946 246 aaKnown RBP10.59□□□□□ -0.71
PTCH1-204ENST00000375290 VPS33AQ96AX1 596 aa10.59□□□□□ -0.71
PTCH1-204ENST00000375290 HEY2Q9UBP5 337 aa10.59□□□□□ -0.71
PTCH1-204ENST00000375290 CFAP99D6REC4 459 aa10.59□□□□□ -0.71
PTCH1-204ENST00000375290 PPEF1O14829 653 aaPredicted RBP10.59□□□□□ -0.71
PTCH1-204ENST00000375290 CEBPAP49715 358 aaPredicted RBP10.59□□□□□ -0.71
PTCH1-204ENST00000375290 STK4Q13043 487 aa10.59□□□□□ -0.71
PTCH1-204ENST00000375290 FKBP9P1Q75LS8 142 aa10.59□□□□□ -0.71
PTCH1-204ENST00000375290 ATXN10Q9UBB4 475 aa10.59□□□□□ -0.71
PTCH1-204ENST00000375290 DMTF1Q9Y222 760 aa10.59□□□□□ -0.71
PTCH1-204ENST00000375290 ATP9AO75110 1047 aa10.58□□□□□ -0.72
PTCH1-204ENST00000375290 FCER1AP12319 257 aa10.58□□□□□ -0.72
PTCH1-204ENST00000375290 RAB25P57735 213 aa10.58□□□□□ -0.72
PTCH1-204ENST00000375290 MSLNQ13421 630 aaPredicted RBP10.58□□□□□ -0.72
PTCH1-204ENST00000375290 ACVR2BQ13705 512 aa10.58□□□□□ -0.72
PTCH1-204ENST00000375290 LPCAT2Q7L5N7 544 aa10.58□□□□□ -0.72
PTCH1-204ENST00000375290 MAGEB10Q96LZ2 347 aaPredicted RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms