RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 EFR3BQ9Y2G0 817 aa14.71□□□□□ -0.05
HMGCL-203ENST00000374490 DOCK5Q9H7D0 1870 aa14.7□□□□□ -0.06
HMGCL-203ENST00000374490 PDHXO00330 501 aa14.7□□□□□ -0.06
HMGCL-203ENST00000374490 O00370 1275 aa14.7□□□□□ -0.06
HMGCL-203ENST00000374490 FAM189A1O60320 539 aa14.7□□□□□ -0.06
HMGCL-203ENST00000374490 LGR5O75473 907 aa14.7□□□□□ -0.06
HMGCL-203ENST00000374490 SUN1O94901 812 aa14.7□□□□□ -0.06
HMGCL-203ENST00000374490 TNNC2P02585 160 aa14.7□□□□□ -0.06
HMGCL-203ENST00000374490 CYP2C8P10632 490 aa14.7□□□□□ -0.06
HMGCL-203ENST00000374490 HARSP12081 509 aaKnown RBP14.7□□□□□ -0.06
HMGCL-203ENST00000374490 GJC1P36383 396 aa14.7□□□□□ -0.06
HMGCL-203ENST00000374490 MAGEA4P43358 317 aa14.7□□□□□ -0.06
HMGCL-203ENST00000374490 VPS41P49754 854 aa14.7□□□□□ -0.06
HMGCL-203ENST00000374490 MORF4L2Q15014 288 aa14.7□□□□□ -0.06
HMGCL-203ENST00000374490 CCDC38Q502W7 563 aa14.7□□□□□ -0.06
HMGCL-203ENST00000374490 C2CD6Q53TS8 623 aa14.7□□□□□ -0.06
HMGCL-203ENST00000374490 ZFYVE27Q5T4F4 411 aa14.7□□□□□ -0.06
HMGCL-203ENST00000374490 TDRPQ86YL5 185 aa14.7□□□□□ -0.06
HMGCL-203ENST00000374490 ALLCQ8N6M5 410 aa14.7□□□□□ -0.06
HMGCL-203ENST00000374490 GBP7Q8N8V2 638 aaPredicted RBP14.7□□□□□ -0.06
HMGCL-203ENST00000374490 NKD2Q969F2 451 aaPredicted RBP14.7□□□□□ -0.06
HMGCL-203ENST00000374490 ELAC2Q9BQ52 826 aaKnown RBP14.7□□□□□ -0.06
HMGCL-203ENST00000374490 TCHPQ9BT92 498 aa14.7□□□□□ -0.06
HMGCL-203ENST00000374490 CISHQ9NSE2 258 aa14.7□□□□□ -0.06
HMGCL-203ENST00000374490 SHOC2Q9UQ13 582 aa14.7□□□□□ -0.06
HMGCL-203ENST00000374490 LRRC37A2A6NM11 1700 aa14.7□□□□□ -0.06
HMGCL-203ENST00000374490 SOWAHBA6NEL2 793 aa14.7□□□□□ -0.06
HMGCL-203ENST00000374490 CFAP73A6NFT4 308 aa14.7□□□□□ -0.06
HMGCL-203ENST00000374490 DNM1LO00429 736 aa14.7□□□□□ -0.06
HMGCL-203ENST00000374490 SNX3O60493 162 aa14.7□□□□□ -0.06
HMGCL-203ENST00000374490 IL18RAPO95256 599 aa14.7□□□□□ -0.06
HMGCL-203ENST00000374490 OAS1P00973 400 aaKnown RBP14.7□□□□□ -0.06
HMGCL-203ENST00000374490 EDN1P05305 212 aa14.7□□□□□ -0.06
HMGCL-203ENST00000374490 ITGAVP06756 1048 aa14.7□□□□□ -0.06
HMGCL-203ENST00000374490 BRAFP15056 766 aa14.7□□□□□ -0.06
HMGCL-203ENST00000374490 TCF7P36402 384 aaPredicted RBP14.7□□□□□ -0.06
HMGCL-203ENST00000374490 IFNAR2P48551 515 aa14.7□□□□□ -0.06
HMGCL-203ENST00000374490 VCPP55072 806 aaKnown RBP14.7□□□□□ -0.06
HMGCL-203ENST00000374490 MYL6P60660 151 aa14.7□□□□□ -0.06
HMGCL-203ENST00000374490 PPARDQ03181 441 aa14.7□□□□□ -0.06
HMGCL-203ENST00000374490 P3H1Q32P28 736 aa14.7□□□□□ -0.06
HMGCL-203ENST00000374490 TFDP3Q5H9I0 405 aa14.7□□□□□ -0.06
HMGCL-203ENST00000374490 PPP1R15BQ5SWA1 713 aa14.7□□□□□ -0.06
HMGCL-203ENST00000374490 MPZL3Q6UWV2 235 aa14.7□□□□□ -0.06
HMGCL-203ENST00000374490 PLPPR4Q7Z2D5 763 aa14.7□□□□□ -0.06
HMGCL-203ENST00000374490 PCGF5Q86SE9 256 aa14.7□□□□□ -0.06
HMGCL-203ENST00000374490 ANKRD23Q86SG2 305 aa14.7□□□□□ -0.06
HMGCL-203ENST00000374490 ERICH1Q86X53 443 aa14.7□□□□□ -0.06
HMGCL-203ENST00000374490 TTC13Q8NBP0 860 aa14.7□□□□□ -0.06
HMGCL-203ENST00000374490 PRPF31Q8WWY3 499 aaKnown RBP14.7□□□□□ -0.06
HMGCL-203ENST00000374490 GRAMD1AQ96CP6 724 aa14.7□□□□□ -0.06
HMGCL-203ENST00000374490 SGSM3Q96HU1 749 aa14.7□□□□□ -0.06
HMGCL-203ENST00000374490 ANKRD36BP1Q96IX9 119 aa14.7□□□□□ -0.06
HMGCL-203ENST00000374490 MCEEQ96PE7 176 aa14.7□□□□□ -0.06
HMGCL-203ENST00000374490 RBM15Q96T37 977 aaKnown RBP eCLIP14.7□□□□□ -0.06
HMGCL-203ENST00000374490 LHX5Q9H2C1 402 aa14.7□□□□□ -0.06
HMGCL-203ENST00000374490 PCDH9Q9HC56 1237 aa14.7□□□□□ -0.06
HMGCL-203ENST00000374490 SENP1Q9P0U3 644 aa14.7□□□□□ -0.06
HMGCL-203ENST00000374490 WDR35Q9P2L0 1181 aa14.7□□□□□ -0.06
HMGCL-203ENST00000374490 TPX2Q9ULW0 747 aaKnown RBP14.7□□□□□ -0.06
HMGCL-203ENST00000374490 ZNF148Q9UQR1 794 aa14.7□□□□□ -0.06
HMGCL-203ENST00000374490 USP15Q9Y4E8 981 aaPredicted RBP14.7□□□□□ -0.06
HMGCL-203ENST00000374490 MYH9P35579 1960 aaKnown RBP14.69□□□□□ -0.06
HMGCL-203ENST00000374490 hCG_1818297A0A087WSY0 165 aa14.69□□□□□ -0.06
HMGCL-203ENST00000374490 IGKV6-21A0A0C4DH24 114 aa14.69□□□□□ -0.06
HMGCL-203ENST00000374490 BTBD19C9JJ37 291 aa14.69□□□□□ -0.06
HMGCL-203ENST00000374490 SMAPO00193 183 aa14.69□□□□□ -0.06
HMGCL-203ENST00000374490 B4GALT4O60513 344 aa14.69□□□□□ -0.06
HMGCL-203ENST00000374490 KRT7P08729 469 aa14.69□□□□□ -0.06
HMGCL-203ENST00000374490 EN2P19622 333 aaPredicted RBP14.69□□□□□ -0.06
HMGCL-203ENST00000374490 BRD2P25440 801 aaKnown RBP14.69□□□□□ -0.06
HMGCL-203ENST00000374490 GCLCP48506 637 aaPredicted RBP14.69□□□□□ -0.06
HMGCL-203ENST00000374490 SLC26A2P50443 739 aa14.69□□□□□ -0.06
HMGCL-203ENST00000374490 GSCP56915 257 aaPredicted RBP14.69□□□□□ -0.06
HMGCL-203ENST00000374490 LAMTOR4Q0VGL1 99 aa14.69□□□□□ -0.06
HMGCL-203ENST00000374490 RASA2Q15283 850 aa14.69□□□□□ -0.06
HMGCL-203ENST00000374490 HADHQ16836 314 aaKnown RBP14.69□□□□□ -0.06
HMGCL-203ENST00000374490 ZNF699Q32M78 642 aa14.69□□□□□ -0.06
HMGCL-203ENST00000374490 Q3C1V9 767 aa14.69□□□□□ -0.06
HMGCL-203ENST00000374490 MFSD7Q6UXD7 560 aa14.69□□□□□ -0.06
HMGCL-203ENST00000374490 TSHZ1Q6ZSZ6 1077 aa14.69□□□□□ -0.06
HMGCL-203ENST00000374490 TRPM8Q7Z2W7 1104 aa14.69□□□□□ -0.06
HMGCL-203ENST00000374490 ANKS1BQ7Z6G8 1248 aa14.69□□□□□ -0.06
HMGCL-203ENST00000374490 GPRC5AQ8NFJ5 357 aa14.69□□□□□ -0.06
HMGCL-203ENST00000374490 FNIP1Q8TF40 1166 aa14.69□□□□□ -0.06
HMGCL-203ENST00000374490 ZNF333Q96JL9 665 aa14.69□□□□□ -0.06
HMGCL-203ENST00000374490 MTMR12Q9C0I1 747 aa14.69□□□□□ -0.06
HMGCL-203ENST00000374490 KCNK9Q9NPC2 374 aa14.69□□□□□ -0.06
HMGCL-203ENST00000374490 SLC12A4Q9UP95 1085 aa14.69□□□□□ -0.06
HMGCL-203ENST00000374490 ABLIM1O14639 778 aa14.68□□□□□ -0.06
HMGCL-203ENST00000374490 CHUKO15111 745 aa14.68□□□□□ -0.06
HMGCL-203ENST00000374490 CST3P01034 146 aaPredicted RBP14.68□□□□□ -0.06
HMGCL-203ENST00000374490 ATF7P17544 494 aaPredicted RBP14.68□□□□□ -0.06
HMGCL-203ENST00000374490 PROZP22891 400 aa14.68□□□□□ -0.06
HMGCL-203ENST00000374490 STX2P32856 288 aa14.68□□□□□ -0.06
HMGCL-203ENST00000374490 MNAT1P51948 309 aa14.68□□□□□ -0.06
HMGCL-203ENST00000374490 SLC18A1P54219 525 aa14.68□□□□□ -0.06
HMGCL-203ENST00000374490 RPL7AP62424 266 aaKnown RBP14.68□□□□□ -0.06
HMGCL-203ENST00000374490 ZBTB33Q86T24 672 aa14.68□□□□□ -0.06
HMGCL-203ENST00000374490 MAGEC3Q8TD91 643 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms