RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 TNNC2P02585 160 aa25.12■■□□□ 1.61
CDK9-201ENST00000373264 BRAFP15056 766 aa25.12■■□□□ 1.61
CDK9-201ENST00000373264 PSMA2P25787 234 aa25.12■■□□□ 1.61
CDK9-201ENST00000373264 RAD23BP54727 409 aa25.12■■□□□ 1.61
CDK9-201ENST00000373264 ALLCQ8N6M5 410 aa25.12■■□□□ 1.61
CDK9-201ENST00000373264 CCDC197Q8NCU1 140 aa25.12■■□□□ 1.61
CDK9-201ENST00000373264 DYDC1Q8WWB3 177 aa25.12■■□□□ 1.61
CDK9-201ENST00000373264 MAF1Q9H063 256 aa25.12■■□□□ 1.61
CDK9-201ENST00000373264 STMN4Q9H169 189 aaPredicted RBP25.12■■□□□ 1.61
CDK9-201ENST00000373264 IFT122Q9HBG6 1241 aa25.12■■□□□ 1.61
CDK9-201ENST00000373264 PCSK1NQ9UHG2 260 aa25.12■■□□□ 1.61
CDK9-201ENST00000373264 ERBB2P04626 1255 aa25.12■■□□□ 1.61
CDK9-201ENST00000373264 ITGB3P05106 788 aa25.12■■□□□ 1.61
CDK9-201ENST00000373264 CAV1Q03135 178 aa25.12■■□□□ 1.61
CDK9-201ENST00000373264 MOGSQ13724 837 aa25.12■■□□□ 1.61
CDK9-201ENST00000373264 JADE1Q6IE81 842 aa25.12■■□□□ 1.61
CDK9-201ENST00000373264 PLPPR4Q7Z2D5 763 aa25.12■■□□□ 1.61
CDK9-201ENST00000373264 ANKRD36BP1Q96IX9 119 aa25.12■■□□□ 1.61
CDK9-201ENST00000373264 EFCC1Q9HA90 598 aa25.12■■□□□ 1.61
CDK9-201ENST00000373264 DNAJC25-GNG10A0A024R161 153 aa25.11■■□□□ 1.61
CDK9-201ENST00000373264 LRCH4O75427 683 aa25.11■■□□□ 1.61
CDK9-201ENST00000373264 EIF4BP23588 611 aaKnown RBP25.11■■□□□ 1.61
CDK9-201ENST00000373264 GCAP28676 217 aa25.11■■□□□ 1.61
CDK9-201ENST00000373264 KCTD2Q14681 263 aa25.11■■□□□ 1.61
CDK9-201ENST00000373264 TFDP3Q5H9I0 405 aa25.11■■□□□ 1.61
CDK9-201ENST00000373264 CROCCP2Q86T23 111 aa25.11■■□□□ 1.61
CDK9-201ENST00000373264 ZCCHC9Q8N567 271 aaKnown RBP25.11■■□□□ 1.61
CDK9-201ENST00000373264 PCDHGC3Q9UN70 934 aa25.11■■□□□ 1.61
CDK9-201ENST00000373264 DNALI1O14645 258 aaPredicted RBP25.11■■□□□ 1.61
CDK9-201ENST00000373264 KRT3P12035 628 aa25.11■■□□□ 1.61
CDK9-201ENST00000373264 CDH5P33151 784 aaPredicted RBP25.11■■□□□ 1.61
CDK9-201ENST00000373264 PSMC1P62191 440 aaKnown RBP25.11■■□□□ 1.61
CDK9-201ENST00000373264 TMED2Q15363 201 aa25.11■■□□□ 1.61
CDK9-201ENST00000373264 OASLQ15646 514 aaKnown RBP25.11■■□□□ 1.61
CDK9-201ENST00000373264 ZKSCAN8Q15776 578 aaPredicted RBP25.11■■□□□ 1.61
CDK9-201ENST00000373264 EAPPQ56P03 285 aaPredicted RBP25.11■■□□□ 1.61
CDK9-201ENST00000373264 ELOVL4Q9GZR5 314 aa25.11■■□□□ 1.61
CDK9-201ENST00000373264 KIF9Q9HAQ2 790 aa25.11■■□□□ 1.61
CDK9-201ENST00000373264 METTL5Q9NRN9 209 aaKnown RBP25.11■■□□□ 1.61
CDK9-201ENST00000373264 DNAH12Q6ZR08 3092 aa25.11■■□□□ 1.61
CDK9-201ENST00000373264 A0A087WZ62 844 aa25.1■■□□□ 1.61
CDK9-201ENST00000373264 SGK1O00141 431 aa25.1■■□□□ 1.61
CDK9-201ENST00000373264 B4GALT4O60513 344 aa25.1■■□□□ 1.61
CDK9-201ENST00000373264 VTNP04004 478 aa25.1■■□□□ 1.61
CDK9-201ENST00000373264 CYP2C8P10632 490 aa25.1■■□□□ 1.61
CDK9-201ENST00000373264 SCTRP47872 440 aa25.1■■□□□ 1.61
CDK9-201ENST00000373264 SLC25A11Q02978 314 aaKnown RBP25.1■■□□□ 1.61
CDK9-201ENST00000373264 FDXACB1Q9BRP7 624 aaPredicted RBP25.1■■□□□ 1.61
CDK9-201ENST00000373264 CXCL16Q9H2A7 254 aa25.1■■□□□ 1.61
CDK9-201ENST00000373264 RPF1Q9H9Y2 349 aaKnown RBP25.1■■□□□ 1.61
CDK9-201ENST00000373264 SH3PXD2AQ5TCZ1 1133 aa25.1■■□□□ 1.61
CDK9-201ENST00000373264 PPP1R13LQ8WUF5 828 aa25.1■■□□□ 1.61
CDK9-201ENST00000373264 CCDC134Q9H6E4 229 aa25.1■■□□□ 1.61
CDK9-201ENST00000373264 HAUS2Q9NVX0 235 aa25.1■■□□□ 1.61
CDK9-201ENST00000373264 AGTPBP1Q9UPW5 1226 aa25.1■■□□□ 1.61
CDK9-201ENST00000373264 C22orf31O95567 290 aa25.09■■□□□ 1.61
CDK9-201ENST00000373264 STAG3L1P0CL83 205 aa25.09■■□□□ 1.61
CDK9-201ENST00000373264 INSRRP14616 1297 aa25.09■■□□□ 1.61
CDK9-201ENST00000373264 IREB2P48200 963 aaKnown RBP25.09■■□□□ 1.61
CDK9-201ENST00000373264 VCPP55072 806 aaKnown RBP25.09■■□□□ 1.61
CDK9-201ENST00000373264 PIGHQ14442 188 aaPredicted RBP25.09■■□□□ 1.61
CDK9-201ENST00000373264 ARMC9Q7Z3E5 817 aa25.09■■□□□ 1.61
CDK9-201ENST00000373264 ERO1BQ86YB8 467 aa25.09■■□□□ 1.61
CDK9-201ENST00000373264 SLC4A11Q8NBS3 891 aa25.09■■□□□ 1.61
CDK9-201ENST00000373264 C2orf40Q9H1Z8 148 aa25.09■■□□□ 1.61
CDK9-201ENST00000373264 ZNF667Q5HYK9 610 aa25.09■■□□□ 1.61
CDK9-201ENST00000373264 ANKMY2Q8IV38 441 aa25.09■■□□□ 1.61
CDK9-201ENST00000373264 UBA3Q8TBC4 463 aa25.09■■□□□ 1.61
CDK9-201ENST00000373264 ADARB2Q9NS39 739 aaKnown RBP25.09■■□□□ 1.61
CDK9-201ENST00000373264 ABCF3Q9NUQ8 709 aa25.09■■□□□ 1.61
CDK9-201ENST00000373264 POC1B-GALNT4F8VUJ3 575 aa25.08■■□□□ 1.61
CDK9-201ENST00000373264 ASAP2O43150 1006 aa25.08■■□□□ 1.61
CDK9-201ENST00000373264 SPAG7O75391 227 aa25.08■■□□□ 1.61
CDK9-201ENST00000373264 ZNF286BP0CG31 522 aa25.08■■□□□ 1.61
CDK9-201ENST00000373264 CETN2P41208 172 aa25.08■■□□□ 1.61
CDK9-201ENST00000373264 OTUD4Q01804 1114 aaKnown RBP25.08■■□□□ 1.61
CDK9-201ENST00000373264 LRRC38Q5VT99 294 aa25.08■■□□□ 1.61
CDK9-201ENST00000373264 ANKRD22Q5VYY1 191 aa25.08■■□□□ 1.61
CDK9-201ENST00000373264 ACTL9Q8TC94 416 aa25.08■■□□□ 1.61
CDK9-201ENST00000373264 PIWIL1Q96J94 861 aaKnown RBP25.08■■□□□ 1.61
CDK9-201ENST00000373264 EURLQ9NYK6 297 aa25.08■■□□□ 1.61
CDK9-201ENST00000373264 CCT8L1PA6NM43 557 aa25.08■■□□□ 1.61
CDK9-201ENST00000373264 XYLT1Q86Y38 959 aa25.08■■□□□ 1.61
CDK9-201ENST00000373264 CXorf38Q8TB03 319 aa25.08■■□□□ 1.61
CDK9-201ENST00000373264 OPTNQ96CV9 577 aa25.08■■□□□ 1.61
CDK9-201ENST00000373264 ZNF518BQ9C0D4 1074 aa25.08■■□□□ 1.61
CDK9-201ENST00000373264 SMARCAD1Q9H4L7 1026 aa25.08■■□□□ 1.61
CDK9-201ENST00000373264 SLC40A1Q9NP59 571 aa25.08■■□□□ 1.61
CDK9-201ENST00000373264 TPX2Q9ULW0 747 aaKnown RBP25.08■■□□□ 1.61
CDK9-201ENST00000373264 CEP83Q9Y592 693 aa25.08■■□□□ 1.61
CDK9-201ENST00000373264 CST8O60676 142 aa25.07■■□□□ 1.6
CDK9-201ENST00000373264 MAP1SQ66K74 1059 aaPredicted RBP25.07■■□□□ 1.6
CDK9-201ENST00000373264 NUGGCQ68CJ6 796 aa25.07■■□□□ 1.6
CDK9-201ENST00000373264 ZBED8Q8IZ13 594 aa25.07■■□□□ 1.6
CDK9-201ENST00000373264 BCO2Q9BYV7 579 aa25.07■■□□□ 1.6
CDK9-201ENST00000373264 SYNCQ9H7C4 482 aa25.07■■□□□ 1.6
CDK9-201ENST00000373264 RNF19AQ9NV58 838 aa25.07■■□□□ 1.6
CDK9-201ENST00000373264 TNFSF13BQ9Y275 285 aa25.07■■□□□ 1.6
CDK9-201ENST00000373264 HGSO14964 777 aaPredicted RBP25.07■■□□□ 1.6
CDK9-201ENST00000373264 SLC25A27O95847 323 aa25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms