RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 VPS36Q86VN1 386 aa16.84■□□□□ 0.29
TMEM53-204ENST00000372243 GPIHBP1Q8IV16 184 aa16.84■□□□□ 0.29
TMEM53-204ENST00000372243 CCDC170Q8IYT3 715 aa16.84■□□□□ 0.29
TMEM53-204ENST00000372243 OR10T2Q8NGX3 314 aa16.84■□□□□ 0.29
TMEM53-204ENST00000372243 MYCBPAPQ8TBZ2 947 aa16.84■□□□□ 0.29
TMEM53-204ENST00000372243 RIN2Q8WYP3 895 aaPredicted RBP16.84■□□□□ 0.29
TMEM53-204ENST00000372243 TFAP2BQ92481 460 aa16.84■□□□□ 0.29
TMEM53-204ENST00000372243 B3GALT6Q96L58 329 aa16.84■□□□□ 0.29
TMEM53-204ENST00000372243 PKMYT1Q99640 499 aa16.84■□□□□ 0.29
TMEM53-204ENST00000372243 ZSWIM1Q9BR11 485 aa16.84■□□□□ 0.29
TMEM53-204ENST00000372243 ZCWPW1Q9H0M4 648 aa16.84■□□□□ 0.29
TMEM53-204ENST00000372243 ZBP1Q9H171 429 aa16.84■□□□□ 0.29
TMEM53-204ENST00000372243 CRTAC1Q9NQ79 661 aa16.84■□□□□ 0.29
TMEM53-204ENST00000372243 O00370 1275 aa16.83■□□□□ 0.28
TMEM53-204ENST00000372243 PLEKP08567 350 aaPredicted RBP16.83■□□□□ 0.28
TMEM53-204ENST00000372243 CHRNB2P17787 502 aa16.83■□□□□ 0.28
TMEM53-204ENST00000372243 PSMC1P62191 440 aaKnown RBP16.83■□□□□ 0.28
TMEM53-204ENST00000372243 CCZ1BP86790 482 aa16.83■□□□□ 0.28
TMEM53-204ENST00000372243 CCZ1P86791 482 aaPredicted RBP16.83■□□□□ 0.28
TMEM53-204ENST00000372243 CREMQ03060 361 aa16.83■□□□□ 0.28
TMEM53-204ENST00000372243 SMARCB1Q12824 385 aa16.83■□□□□ 0.28
TMEM53-204ENST00000372243 PSMD5Q16401 504 aa16.83■□□□□ 0.28
TMEM53-204ENST00000372243 SLC8B1Q6J4K2 584 aa16.83■□□□□ 0.28
TMEM53-204ENST00000372243 DCP1BQ8IZD4 617 aaKnown RBP16.83■□□□□ 0.28
TMEM53-204ENST00000372243 C12orf29Q8N999 325 aa16.83■□□□□ 0.28
TMEM53-204ENST00000372243 SPPL3Q8TCT6 385 aa16.83■□□□□ 0.28
TMEM53-204ENST00000372243 SLC20A1Q8WUM9 679 aa16.83■□□□□ 0.28
TMEM53-204ENST00000372243 CYFIP2Q96F07 1278 aa16.83■□□□□ 0.28
TMEM53-204ENST00000372243 CCDC42Q96M95 316 aa16.83■□□□□ 0.28
TMEM53-204ENST00000372243 NKX2-4Q9H2Z4 354 aa16.83■□□□□ 0.28
TMEM53-204ENST00000372243 SLC28A3Q9HAS3 691 aa16.83■□□□□ 0.28
TMEM53-204ENST00000372243 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.83■□□□□ 0.28
TMEM53-204ENST00000372243 MRPL17Q9NRX2 175 aaKnown RBP16.83■□□□□ 0.28
TMEM53-204ENST00000372243 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.83■□□□□ 0.28
TMEM53-204ENST00000372243 IRAK3Q9Y616 596 aa16.83■□□□□ 0.28
TMEM53-204ENST00000372243 H3BNC9 293 aa16.82■□□□□ 0.28
TMEM53-204ENST00000372243 ARHGAP6O43182 974 aa16.82■□□□□ 0.28
TMEM53-204ENST00000372243 LILRB3O75022 631 aa16.82■□□□□ 0.28
TMEM53-204ENST00000372243 ATP2C2O75185 946 aa16.82■□□□□ 0.28
TMEM53-204ENST00000372243 TNFAIP3P21580 790 aa16.82■□□□□ 0.28
TMEM53-204ENST00000372243 BRD2P25440 801 aaKnown RBP16.82■□□□□ 0.28
TMEM53-204ENST00000372243 EIF4A3P38919 411 aaKnown RBP16.82■□□□□ 0.28
TMEM53-204ENST00000372243 FMO1Q01740 532 aa16.82■□□□□ 0.28
TMEM53-204ENST00000372243 LRIT3Q3SXY7 679 aa16.82■□□□□ 0.28
TMEM53-204ENST00000372243 PPP1R26Q5T8A7 1209 aaPredicted RBP16.82■□□□□ 0.28
TMEM53-204ENST00000372243 PPP2R2DQ66LE6 453 aa16.82■□□□□ 0.28
TMEM53-204ENST00000372243 LCLAT1Q6UWP7 414 aa16.82■□□□□ 0.28
TMEM53-204ENST00000372243 TRIM72Q6ZMU5 477 aa16.82■□□□□ 0.28
TMEM53-204ENST00000372243 SLC30A5Q8TAD4 765 aa16.82■□□□□ 0.28
TMEM53-204ENST00000372243 OLIG1Q8TAK6 271 aa16.82■□□□□ 0.28
TMEM53-204ENST00000372243 HNRNPABQ99729 332 aaKnown RBP16.82■□□□□ 0.28
TMEM53-204ENST00000372243 DEF6Q9H4E7 631 aa16.82■□□□□ 0.28
TMEM53-204ENST00000372243 FNIP2Q9P278 1114 aa16.82■□□□□ 0.28
TMEM53-204ENST00000372243 GTF3C4Q9UKN8 822 aa16.82■□□□□ 0.28
TMEM53-204ENST00000372243 MYBPHLA2RUH7 354 aa16.81■□□□□ 0.28
TMEM53-204ENST00000372243 CALCAP01258 141 aa16.81■□□□□ 0.28
TMEM53-204ENST00000372243 MMEP08473 750 aa16.81■□□□□ 0.28
TMEM53-204ENST00000372243 DNAJB2P25686 324 aa16.81■□□□□ 0.28
TMEM53-204ENST00000372243 CYLC1P35663 651 aaPredicted RBP16.81■□□□□ 0.28
TMEM53-204ENST00000372243 SLC18A3Q16572 532 aa16.81■□□□□ 0.28
TMEM53-204ENST00000372243 NFE2Q16621 373 aaPredicted RBP16.81■□□□□ 0.28
TMEM53-204ENST00000372243 HS1BP3Q53T59 392 aa16.81■□□□□ 0.28
TMEM53-204ENST00000372243 MDH1BQ5I0G3 518 aa16.81■□□□□ 0.28
TMEM53-204ENST00000372243 TAF3Q5VWG9 929 aa16.81■□□□□ 0.28
TMEM53-204ENST00000372243 PRSS55Q6UWB4 352 aaPredicted RBP16.81■□□□□ 0.28
TMEM53-204ENST00000372243 SPRED2Q7Z698 418 aa16.81■□□□□ 0.28
TMEM53-204ENST00000372243 FBXO22Q8NEZ5 403 aa16.81■□□□□ 0.28
TMEM53-204ENST00000372243 POF1BQ8WVV4 589 aa16.81■□□□□ 0.28
TMEM53-204ENST00000372243 PCED1BQ96HM7 432 aa16.81■□□□□ 0.28
TMEM53-204ENST00000372243 LHX5Q9H2C1 402 aa16.81■□□□□ 0.28
TMEM53-204ENST00000372243 KCNF1Q9H3M0 494 aa16.81■□□□□ 0.28
TMEM53-204ENST00000372243 RXFP1Q9HBX9 757 aa16.81■□□□□ 0.28
TMEM53-204ENST00000372243 ALG13Q9NP73 1137 aaKnown RBP16.81■□□□□ 0.28
TMEM53-204ENST00000372243 FAM49BQ9NUQ9 324 aa16.81■□□□□ 0.28
TMEM53-204ENST00000372243 ADAMTS1Q9UHI8 967 aa16.81■□□□□ 0.28
TMEM53-204ENST00000372243 TSPAN16Q9UKR8 245 aa16.81■□□□□ 0.28
TMEM53-204ENST00000372243 SOWAHDA6NJG2 315 aa16.81■□□□□ 0.28
TMEM53-204ENST00000372243 DDX3XO00571 662 aaKnown RBP eCLIP16.81■□□□□ 0.283e-7■■■□□ 18.6
TMEM53-204ENST00000372243 AKR1B10O60218 316 aa16.81■□□□□ 0.28
TMEM53-204ENST00000372243 LCA5LO95447 670 aa16.81■□□□□ 0.28
TMEM53-204ENST00000372243 LSM8O95777 96 aaKnown RBP16.81■□□□□ 0.28
TMEM53-204ENST00000372243 CYP1A1P04798 512 aaPredicted RBP16.81■□□□□ 0.28
TMEM53-204ENST00000372243 CDH5P33151 784 aaPredicted RBP16.81■□□□□ 0.28
TMEM53-204ENST00000372243 KIF11P52732 1056 aa16.81■□□□□ 0.28
TMEM53-204ENST00000372243 GPR17Q13304 367 aa16.81■□□□□ 0.28
TMEM53-204ENST00000372243 PTPN14Q15678 1187 aa16.81■□□□□ 0.28
TMEM53-204ENST00000372243 RSPO2Q6UXX9 243 aaPredicted RBP16.81■□□□□ 0.28
TMEM53-204ENST00000372243 C4orf50Q6ZRC1 276 aa16.81■□□□□ 0.28
TMEM53-204ENST00000372243 LRRTM3Q86VH5 581 aa16.81■□□□□ 0.28
TMEM53-204ENST00000372243 GLYCTKQ8IVS8 523 aa16.81■□□□□ 0.28
TMEM53-204ENST00000372243 FUKQ8N0W3 1084 aa16.81■□□□□ 0.28
TMEM53-204ENST00000372243 FUBP3Q96I24 572 aaKnown RBP eCLIP16.81■□□□□ 0.28
TMEM53-204ENST00000372243 TMEM209Q96SK2 561 aa16.81■□□□□ 0.28
TMEM53-204ENST00000372243 LPIN3Q9BQK8 851 aa16.81■□□□□ 0.28
TMEM53-204ENST00000372243 CLSTN3Q9BQT9 956 aa16.81■□□□□ 0.28
TMEM53-204ENST00000372243 ZNF518BQ9C0D4 1074 aa16.81■□□□□ 0.28
TMEM53-204ENST00000372243 PDCL3Q9H2J4 239 aa16.81■□□□□ 0.28
TMEM53-204ENST00000372243 TLR9Q9NR96 1032 aa16.81■□□□□ 0.28
TMEM53-204ENST00000372243 MTUS1Q9ULD2 1270 aa16.81■□□□□ 0.28
TMEM53-204ENST00000372243 CDY1Q9Y6F8 540 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms