RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 RSPH10BP0C881 870 aa13.91□□□□□ -0.18
RAPGEF1-201ENST00000372189 CCND1P24385 295 aa13.91□□□□□ -0.18
RAPGEF1-201ENST00000372189 SERPINB4P48594 390 aa13.91□□□□□ -0.18
RAPGEF1-201ENST00000372189 OAZ1P54368 228 aa13.91□□□□□ -0.18
RAPGEF1-201ENST00000372189 APOBEC3HQ6NTF7 200 aaKnown RBP13.91□□□□□ -0.18
RAPGEF1-201ENST00000372189 SYTL5Q8TDW5 730 aaPredicted RBP13.91□□□□□ -0.18
RAPGEF1-201ENST00000372189 NCLNQ969V3 563 aa13.91□□□□□ -0.18
RAPGEF1-201ENST00000372189 SEC16BQ96JE7 1060 aa13.91□□□□□ -0.18
RAPGEF1-201ENST00000372189 SLC1A1P43005 524 aa13.9□□□□□ -0.18
RAPGEF1-201ENST00000372189 ARPC4P59998 168 aa13.9□□□□□ -0.18
RAPGEF1-201ENST00000372189 HIC1Q14526 733 aa13.9□□□□□ -0.18
RAPGEF1-201ENST00000372189 NR1I3Q14994 352 aa13.9□□□□□ -0.18
RAPGEF1-201ENST00000372189 NDUFA5Q16718 116 aa13.9□□□□□ -0.18
RAPGEF1-201ENST00000372189 SH2D3CQ8N5H7 860 aa13.9□□□□□ -0.18
RAPGEF1-201ENST00000372189 EFHBQ8N7U6 833 aa13.9□□□□□ -0.18
RAPGEF1-201ENST00000372189 BHMTQ93088 406 aa13.9□□□□□ -0.18
RAPGEF1-201ENST00000372189 OLFM1Q99784 485 aa13.9□□□□□ -0.18
RAPGEF1-201ENST00000372189 AGO4Q9HCK5 861 aaKnown RBP13.9□□□□□ -0.18
RAPGEF1-201ENST00000372189 DPP3Q9NY33 737 aa13.9□□□□□ -0.18
RAPGEF1-201ENST00000372189 KLK14Q9P0G3 267 aa13.9□□□□□ -0.18
RAPGEF1-201ENST00000372189 ATP6V1HQ9UI12 483 aa13.9□□□□□ -0.18
RAPGEF1-201ENST00000372189 PCDHB8Q9UN66 801 aa13.9□□□□□ -0.18
RAPGEF1-201ENST00000372189 CCNCP24863 283 aa13.9□□□□□ -0.18
RAPGEF1-201ENST00000372189 STK4Q13043 487 aa13.9□□□□□ -0.18
RAPGEF1-201ENST00000372189 CYLC2Q14093 348 aaPredicted RBP13.9□□□□□ -0.18
RAPGEF1-201ENST00000372189 CPA5Q8WXQ8 436 aa13.9□□□□□ -0.18
RAPGEF1-201ENST00000372189 SH3KBP1Q96B97 665 aa13.9□□□□□ -0.18
RAPGEF1-201ENST00000372189 MTG1Q9BT17 334 aaPredicted RBP13.9□□□□□ -0.18
RAPGEF1-201ENST00000372189 GPRC5DQ9NZD1 345 aa13.9□□□□□ -0.18
RAPGEF1-201ENST00000372189 ADA2Q9NZK5 511 aa13.9□□□□□ -0.18
RAPGEF1-201ENST00000372189 C3P01024 1663 aa13.9□□□□□ -0.18
RAPGEF1-201ENST00000372189 C2CD2LO14523 706 aa13.9□□□□□ -0.18
RAPGEF1-201ENST00000372189 SNX2O60749 519 aa13.9□□□□□ -0.18
RAPGEF1-201ENST00000372189 NAMPTP43490 491 aa13.9□□□□□ -0.18
RAPGEF1-201ENST00000372189 CLCN3P51790 818 aa13.9□□□□□ -0.18
RAPGEF1-201ENST00000372189 METTL7BQ6UX53 244 aa13.9□□□□□ -0.18
RAPGEF1-201ENST00000372189 IRX2Q9BZI1 471 aaPredicted RBP13.9□□□□□ -0.18
RAPGEF1-201ENST00000372189 IL25Q9H293 177 aa13.9□□□□□ -0.18
RAPGEF1-201ENST00000372189 CHMP1AQ9HD42 196 aaPredicted RBP13.9□□□□□ -0.18
RAPGEF1-201ENST00000372189 P2RX7Q99572 595 aaKnown RBP13.9□□□□□ -0.18
RAPGEF1-201ENST00000372189 FAM49BQ9NUQ9 324 aa13.9□□□□□ -0.18
RAPGEF1-201ENST00000372189 TTC30BQ8N4P2 665 aa13.9□□□□□ -0.18
RAPGEF1-201ENST00000372189 RMDN1Q96DB5 314 aa13.9□□□□□ -0.18
RAPGEF1-201ENST00000372189 XPO6Q96QU8 1125 aaKnown RBP13.9□□□□□ -0.18
RAPGEF1-201ENST00000372189 CARD8Q9Y2G2 431 aa13.9□□□□□ -0.18
RAPGEF1-201ENST00000372189 LRRIQ3A6PVS8 624 aaPredicted RBP13.89□□□□□ -0.19
RAPGEF1-201ENST00000372189 VTNP04004 478 aa13.89□□□□□ -0.19
RAPGEF1-201ENST00000372189 PPIL2Q13356 520 aa13.89□□□□□ -0.19
RAPGEF1-201ENST00000372189 RCN1Q15293 331 aa13.89□□□□□ -0.19
RAPGEF1-201ENST00000372189 GOLGA7BQ2TAP0 167 aa13.89□□□□□ -0.19
RAPGEF1-201ENST00000372189 SDE2Q6IQ49 451 aa13.89□□□□□ -0.19
RAPGEF1-201ENST00000372189 LONP2Q86WA8 852 aa13.89□□□□□ -0.19
RAPGEF1-201ENST00000372189 RASSF3Q86WH2 238 aa13.89□□□□□ -0.19
RAPGEF1-201ENST00000372189 YME1L1Q96TA2 773 aa13.89□□□□□ -0.19
RAPGEF1-201ENST00000372189 RUSC1Q9BVN2 902 aa13.89□□□□□ -0.19
RAPGEF1-201ENST00000372189 COG4Q9H9E3 785 aa13.89□□□□□ -0.19
RAPGEF1-201ENST00000372189 LRRC4BQ9NT99 713 aa13.89□□□□□ -0.19
RAPGEF1-201ENST00000372189 OLA1Q9NTK5 396 aaKnown RBP13.89□□□□□ -0.19
RAPGEF1-201ENST00000372189 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.89□□□□□ -0.19
RAPGEF1-201ENST00000372189 E5RI56 91 aa13.89□□□□□ -0.19
RAPGEF1-201ENST00000372189 TMCC1O94876 653 aa13.89□□□□□ -0.19
RAPGEF1-201ENST00000372189 PDGFRAP16234 1089 aa13.89□□□□□ -0.19
RAPGEF1-201ENST00000372189 ADORA2AP29274 412 aa13.89□□□□□ -0.19
RAPGEF1-201ENST00000372189 LSP1P33241 339 aa13.89□□□□□ -0.19
RAPGEF1-201ENST00000372189 ABL2P42684 1182 aa13.89□□□□□ -0.19
RAPGEF1-201ENST00000372189 CORO7P57737 925 aa13.89□□□□□ -0.19
RAPGEF1-201ENST00000372189 KLC1Q07866 573 aa13.89□□□□□ -0.19
RAPGEF1-201ENST00000372189 OLFML2BQ68BL8 750 aa13.89□□□□□ -0.19
RAPGEF1-201ENST00000372189 CD302Q8IX05 232 aa13.89□□□□□ -0.19
RAPGEF1-201ENST00000372189 NIF3L1Q9GZT8 377 aa13.89□□□□□ -0.19
RAPGEF1-201ENST00000372189 TRABDQ9H4I3 376 aa13.89□□□□□ -0.19
RAPGEF1-201ENST00000372189 ENTPD7Q9NQZ7 604 aa13.89□□□□□ -0.19
RAPGEF1-201ENST00000372189 SSU72P8A0A1W2PR75 194 aa13.89□□□□□ -0.19
RAPGEF1-201ENST00000372189 ITGB3P05106 788 aa13.89□□□□□ -0.19
RAPGEF1-201ENST00000372189 ZNF286BP0CG31 522 aa13.89□□□□□ -0.19
RAPGEF1-201ENST00000372189 CYP2C8P10632 490 aa13.89□□□□□ -0.19
RAPGEF1-201ENST00000372189 KLRC1P26715 233 aa13.89□□□□□ -0.19
RAPGEF1-201ENST00000372189 PUDPQ08623 228 aa13.89□□□□□ -0.19
RAPGEF1-201ENST00000372189 TBL3Q12788 808 aaKnown RBP13.89□□□□□ -0.19
RAPGEF1-201ENST00000372189 PGM5Q15124 567 aa13.89□□□□□ -0.19
RAPGEF1-201ENST00000372189 MAPRE2Q15555 327 aa13.89□□□□□ -0.19
RAPGEF1-201ENST00000372189 MAPRE1Q15691 268 aaKnown RBP13.89□□□□□ -0.19
RAPGEF1-201ENST00000372189 KIZQ2M2Z5 673 aa13.89□□□□□ -0.19
RAPGEF1-201ENST00000372189 TTC23LQ6PF05 361 aa13.89□□□□□ -0.19
RAPGEF1-201ENST00000372189 STK32CQ86UX6 486 aa13.89□□□□□ -0.19
RAPGEF1-201ENST00000372189 ZNF483Q8TF39 744 aaPredicted RBP13.89□□□□□ -0.19
RAPGEF1-201ENST00000372189 HNRNPLLQ8WVV9 542 aaKnown RBP13.89□□□□□ -0.19
RAPGEF1-201ENST00000372189 C1orf54Q8WWF1 131 aa13.89□□□□□ -0.19
RAPGEF1-201ENST00000372189 TSPAN18Q96SJ8 248 aa13.89□□□□□ -0.19
RAPGEF1-201ENST00000372189 CHP1Q99653 195 aa13.89□□□□□ -0.19
RAPGEF1-201ENST00000372189 MKNK1Q9BUB5 465 aa13.89□□□□□ -0.19
RAPGEF1-201ENST00000372189 UBR1Q8IWV7 1749 aa13.89□□□□□ -0.19
RAPGEF1-201ENST00000372189 PHF2O75151 1096 aa13.89□□□□□ -0.19
RAPGEF1-201ENST00000372189 WASHC5Q12768 1159 aa13.89□□□□□ -0.19
RAPGEF1-201ENST00000372189 PAN2Q504Q3 1202 aaKnown RBP13.89□□□□□ -0.19
RAPGEF1-201ENST00000372189 TAS2R42Q7RTR8 314 aa13.89□□□□□ -0.19
RAPGEF1-201ENST00000372189 SHCBP1Q8NEM2 672 aa13.89□□□□□ -0.19
RAPGEF1-201ENST00000372189 CYP4F11Q9HBI6 524 aa13.89□□□□□ -0.19
RAPGEF1-201ENST00000372189 DDX4Q9NQI0 724 aaKnown RBP13.89□□□□□ -0.19
RAPGEF1-201ENST00000372189 FMR1Q06787 632 aaKnown RBP eCLIP13.89□□□□□ -0.191e-6■■□□□ 13.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms