RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 EDN1P05305 212 aa14.94□□□□□ -0.02
LDB3-204ENST00000372066 CTSHP09668 335 aa14.94□□□□□ -0.02
LDB3-204ENST00000372066 WNT7BP56706 349 aa14.94□□□□□ -0.02
LDB3-204ENST00000372066 RWDD2BP57060 319 aa14.94□□□□□ -0.02
LDB3-204ENST00000372066 MRPS25P82663 173 aaKnown RBP14.94□□□□□ -0.02
LDB3-204ENST00000372066 DR1Q01658 176 aa14.94□□□□□ -0.02
LDB3-204ENST00000372066 CYP1B1Q16678 543 aa14.94□□□□□ -0.02
LDB3-204ENST00000372066 TSHZ1Q6ZSZ6 1077 aa14.94□□□□□ -0.02
LDB3-204ENST00000372066 IFNLR1Q8IU57 520 aaPredicted RBP14.94□□□□□ -0.02
LDB3-204ENST00000372066 IQCKQ8N0W5 287 aa14.94□□□□□ -0.02
LDB3-204ENST00000372066 FAM76AQ8TAV0 307 aa14.94□□□□□ -0.02
LDB3-204ENST00000372066 FZD8Q9H461 694 aa14.94□□□□□ -0.02
LDB3-204ENST00000372066 MRPL47Q9HD33 250 aaKnown RBP14.94□□□□□ -0.02
LDB3-204ENST00000372066 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.94□□□□□ -0.02
LDB3-204ENST00000372066 AMACRQ9UHK6 382 aa14.94□□□□□ -0.02
LDB3-204ENST00000372066 PCDHB4Q9Y5E5 795 aa14.94□□□□□ -0.02
LDB3-204ENST00000372066 TANC1Q9C0D5 1861 aa14.94□□□□□ -0.02
LDB3-204ENST00000372066 ESYT3A0FGR9 886 aa14.94□□□□□ -0.02
LDB3-204ENST00000372066 GOLGA6CA6NDK9 693 aa14.94□□□□□ -0.02
LDB3-204ENST00000372066 TMEM110-MUSTN1A8MSY1 372 aa14.94□□□□□ -0.02
LDB3-204ENST00000372066 ABLIM1O14639 778 aa14.94□□□□□ -0.02
LDB3-204ENST00000372066 ERLIN2O94905 339 aa14.94□□□□□ -0.02
LDB3-204ENST00000372066 UPP2O95045 317 aa14.94□□□□□ -0.02
LDB3-204ENST00000372066 GOLGA6DP0CG33 693 aa14.94□□□□□ -0.02
LDB3-204ENST00000372066 ITGA4P13612 1032 aa14.94□□□□□ -0.02
LDB3-204ENST00000372066 MARK3P27448 753 aa14.94□□□□□ -0.02
LDB3-204ENST00000372066 GNA15P30679 374 aa14.94□□□□□ -0.02
LDB3-204ENST00000372066 HOXC8P31273 242 aa14.94□□□□□ -0.02
LDB3-204ENST00000372066 HTRA4P83105 476 aaPredicted RBP14.94□□□□□ -0.02
LDB3-204ENST00000372066 C1QBPQ07021 282 aaKnown RBP14.94□□□□□ -0.02
LDB3-204ENST00000372066 PTP4A2Q12974 167 aa14.94□□□□□ -0.02
LDB3-204ENST00000372066 MKRN4PQ13434 485 aaPredicted RBP14.94□□□□□ -0.02
LDB3-204ENST00000372066 DRP2Q13474 957 aa14.94□□□□□ -0.02
LDB3-204ENST00000372066 KYAT1Q16773 422 aa14.94□□□□□ -0.02
LDB3-204ENST00000372066 FAM187BQ17R55 369 aa14.94□□□□□ -0.02
LDB3-204ENST00000372066 DUOXA2Q1HG44 320 aa14.94□□□□□ -0.02
LDB3-204ENST00000372066 LMBRD2Q68DH5 695 aaPredicted RBP14.94□□□□□ -0.02
LDB3-204ENST00000372066 MON1BQ7L1V2 547 aa14.94□□□□□ -0.02
LDB3-204ENST00000372066 PHF13Q86YI8 300 aaPredicted RBP14.94□□□□□ -0.02
LDB3-204ENST00000372066 UBR7Q8N806 425 aa14.94□□□□□ -0.02
LDB3-204ENST00000372066 C12orf50Q8NA57 414 aaPredicted RBP14.94□□□□□ -0.02
LDB3-204ENST00000372066 RBBP8NLQ8NC74 664 aaPredicted RBP14.94□□□□□ -0.02
LDB3-204ENST00000372066 YME1L1Q96TA2 773 aa14.94□□□□□ -0.02
LDB3-204ENST00000372066 TCHPQ9BT92 498 aa14.94□□□□□ -0.02
LDB3-204ENST00000372066 OSBPL7Q9BZF2 842 aa14.94□□□□□ -0.02
LDB3-204ENST00000372066 UBE2ZQ9H832 354 aaPredicted RBP14.94□□□□□ -0.02
LDB3-204ENST00000372066 APOBEC3GQ9HC16 384 aaKnown RBP14.94□□□□□ -0.02
LDB3-204ENST00000372066 PRMT7Q9NVM4 692 aaPredicted RBP14.94□□□□□ -0.02
LDB3-204ENST00000372066 GOLGA6AQ9NYA3 693 aa14.94□□□□□ -0.02
LDB3-204ENST00000372066 PARP2Q9UGN5 583 aa14.94□□□□□ -0.02
LDB3-204ENST00000372066 PCYOX1Q9UHG3 505 aa14.94□□□□□ -0.02
LDB3-204ENST00000372066 TNFSF13BQ9Y275 285 aa14.94□□□□□ -0.02
LDB3-204ENST00000372066 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.94□□□□□ -0.02
LDB3-204ENST00000372066 RALGAPA2Q2PPJ7 1873 aa14.93□□□□□ -0.02
LDB3-204ENST00000372066 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.93□□□□□ -0.02
LDB3-204ENST00000372066 PODXLO00592 558 aa14.93□□□□□ -0.02
LDB3-204ENST00000372066 TTI1O43156 1089 aa14.93□□□□□ -0.02
LDB3-204ENST00000372066 ATMINO43313 823 aaPredicted RBP14.93□□□□□ -0.02
LDB3-204ENST00000372066 CAND2O75155 1236 aa14.93□□□□□ -0.02
LDB3-204ENST00000372066 LSM8O95777 96 aaKnown RBP14.93□□□□□ -0.02
LDB3-204ENST00000372066 FAM153BP0C7A2 387 aa14.93□□□□□ -0.02
LDB3-204ENST00000372066 ECHS1P30084 290 aa14.93□□□□□ -0.02
LDB3-204ENST00000372066 PHKA2P46019 1235 aa14.93□□□□□ -0.02
LDB3-204ENST00000372066 LMAN1P49257 510 aa14.93□□□□□ -0.02
LDB3-204ENST00000372066 FNTAP49354 379 aa14.93□□□□□ -0.02
LDB3-204ENST00000372066 ZNF132P52740 706 aa14.93□□□□□ -0.02
LDB3-204ENST00000372066 NOMO3P69849 1222 aa14.93□□□□□ -0.02
LDB3-204ENST00000372066 SGSM1Q2NKQ1 1148 aa14.93□□□□□ -0.02
LDB3-204ENST00000372066 FAM153CQ494X1 144 aa14.93□□□□□ -0.02
LDB3-204ENST00000372066 ZBTB41Q5SVQ8 909 aa14.93□□□□□ -0.02
LDB3-204ENST00000372066 ATF7IP2Q5U623 682 aa14.93□□□□□ -0.02
LDB3-204ENST00000372066 TRIM50Q86XT4 487 aa14.93□□□□□ -0.02
LDB3-204ENST00000372066 OR5B17Q8NGF7 314 aa14.93□□□□□ -0.02
LDB3-204ENST00000372066 KRT35Q92764 455 aa14.93□□□□□ -0.02
LDB3-204ENST00000372066 TOP1MTQ969P6 601 aa14.93□□□□□ -0.02
LDB3-204ENST00000372066 ZIM3Q96PE6 472 aa14.93□□□□□ -0.02
LDB3-204ENST00000372066 NIF3L1Q9GZT8 377 aa14.93□□□□□ -0.02
LDB3-204ENST00000372066 ACP6Q9NPH0 428 aa14.93□□□□□ -0.02
LDB3-204ENST00000372066 FAM153AQ9UHL3 310 aa14.93□□□□□ -0.02
LDB3-204ENST00000372066 ANAPC7Q9UJX3 599 aa14.93□□□□□ -0.02
LDB3-204ENST00000372066 BDP1A6H8Y1 2624 aa14.93□□□□□ -0.02
LDB3-204ENST00000372066 TRANK1O15050 2925 aa14.92□□□□□ -0.02
LDB3-204ENST00000372066 REV3LO60673 3130 aa14.92□□□□□ -0.02
LDB3-204ENST00000372066 RPS6KA5O75582 802 aa14.92□□□□□ -0.02
LDB3-204ENST00000372066 TNNC2P02585 160 aa14.92□□□□□ -0.02
LDB3-204ENST00000372066 SRGAP2CP0DJJ0 459 aa14.92□□□□□ -0.02
LDB3-204ENST00000372066 KCNA5P22460 613 aa14.92□□□□□ -0.02
LDB3-204ENST00000372066 MAN1A1P33908 653 aa14.92□□□□□ -0.02
LDB3-204ENST00000372066 TMEM270Q6UE05 265 aa14.92□□□□□ -0.02
LDB3-204ENST00000372066 LEKR1Q6ZMV7 388 aa14.92□□□□□ -0.02
LDB3-204ENST00000372066 SLC13A5Q86YT5 568 aaPredicted RBP14.92□□□□□ -0.02
LDB3-204ENST00000372066 RHPN2Q8IUC4 686 aa14.92□□□□□ -0.02
LDB3-204ENST00000372066 SP7Q8TDD2 431 aaPredicted RBP14.92□□□□□ -0.02
LDB3-204ENST00000372066 FAM122AQ96E09 287 aa14.92□□□□□ -0.02
LDB3-204ENST00000372066 ANKRD36BP1Q96IX9 119 aa14.92□□□□□ -0.02
LDB3-204ENST00000372066 SAMD11Q96NU1 681 aa14.92□□□□□ -0.02
LDB3-204ENST00000372066 HINFPQ9BQA5 517 aa14.92□□□□□ -0.02
LDB3-204ENST00000372066 ERP44Q9BS26 406 aa14.92□□□□□ -0.02
LDB3-204ENST00000372066 LRFN3Q9BTN0 628 aa14.92□□□□□ -0.02
LDB3-204ENST00000372066 ZNF518BQ9C0D4 1074 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms