RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 RSPH10B2B2RC85 870 aa12.11□□□□□ -0.47
TSPAN1-201ENST00000372003 KIAA0355O15063 1070 aa12.11□□□□□ -0.47
TSPAN1-201ENST00000372003 NEBLO76041 1014 aa12.11□□□□□ -0.47
TSPAN1-201ENST00000372003 TIMP1P01033 207 aa12.11□□□□□ -0.47
TSPAN1-201ENST00000372003 RPSAP08865 295 aaKnown RBP12.11□□□□□ -0.47
TSPAN1-201ENST00000372003 RSPH10BP0C881 870 aa12.11□□□□□ -0.47
TSPAN1-201ENST00000372003 MSH2P43246 934 aa12.11□□□□□ -0.47
TSPAN1-201ENST00000372003 NLRP11P59045 1033 aaKnown RBP12.11□□□□□ -0.47
TSPAN1-201ENST00000372003 MLLT1Q03111 559 aaPredicted RBP12.11□□□□□ -0.47
TSPAN1-201ENST00000372003 KIZQ2M2Z5 673 aa12.11□□□□□ -0.47
TSPAN1-201ENST00000372003 IER5Q5VY09 327 aa12.11□□□□□ -0.47
TSPAN1-201ENST00000372003 GJB7Q6PEY0 223 aa12.11□□□□□ -0.47
TSPAN1-201ENST00000372003 PPP1R21Q6ZMI0 780 aa12.11□□□□□ -0.47
TSPAN1-201ENST00000372003 ARHGEF18Q6ZSZ5 1173 aa12.11□□□□□ -0.47
TSPAN1-201ENST00000372003 C1orf186Q6ZWK4 172 aa12.11□□□□□ -0.47
TSPAN1-201ENST00000372003 HS2ST1Q7LGA3 356 aa12.11□□□□□ -0.47
TSPAN1-201ENST00000372003 SLC13A5Q86YT5 568 aaPredicted RBP12.11□□□□□ -0.47
TSPAN1-201ENST00000372003 NME8Q8N427 588 aa12.11□□□□□ -0.47
TSPAN1-201ENST00000372003 LINC01465Q8N7H1 131 aa12.11□□□□□ -0.47
TSPAN1-201ENST00000372003 EPS8L3Q8TE67 593 aaKnown RBP12.11□□□□□ -0.47
TSPAN1-201ENST00000372003 PRPF31Q8WWY3 499 aaKnown RBP12.11□□□□□ -0.47
TSPAN1-201ENST00000372003 ARHGEF2Q92974 986 aaKnown RBP12.11□□□□□ -0.47
TSPAN1-201ENST00000372003 CD101Q93033 1021 aa12.11□□□□□ -0.47
TSPAN1-201ENST00000372003 C18orf8Q96DM3 657 aa12.11□□□□□ -0.47
TSPAN1-201ENST00000372003 ARHGEF26Q96DR7 871 aa12.11□□□□□ -0.47
TSPAN1-201ENST00000372003 MAGEB18Q96M61 343 aa12.11□□□□□ -0.47
TSPAN1-201ENST00000372003 POLR3FQ9H1D9 316 aaPredicted RBP12.11□□□□□ -0.47
TSPAN1-201ENST00000372003 CDHR5Q9HBB8 845 aa12.11□□□□□ -0.47
TSPAN1-201ENST00000372003 TXLNGQ9NUQ3 528 aa12.11□□□□□ -0.47
TSPAN1-201ENST00000372003 LGALS13Q9UHV8 139 aa12.11□□□□□ -0.47
TSPAN1-201ENST00000372003 FRMD4BQ9Y2L6 1034 aa12.11□□□□□ -0.47
TSPAN1-201ENST00000372003 PCDHB13Q9Y5F0 798 aa12.11□□□□□ -0.47
TSPAN1-201ENST00000372003 TCP11X1B4DZS4 312 aa12.11□□□□□ -0.47
TSPAN1-201ENST00000372003 M0QZ92 97 aa12.11□□□□□ -0.47
TSPAN1-201ENST00000372003 PMM2O15305 246 aa12.11□□□□□ -0.47
TSPAN1-201ENST00000372003 ECEL1O95672 775 aa12.11□□□□□ -0.47
TSPAN1-201ENST00000372003 CHRNA1P02708 482 aa12.11□□□□□ -0.47
TSPAN1-201ENST00000372003 IQCF3P0C7M6 154 aa12.11□□□□□ -0.47
TSPAN1-201ENST00000372003 SRGAP2CP0DJJ0 459 aa12.11□□□□□ -0.47
TSPAN1-201ENST00000372003 SELPP16109 830 aa12.11□□□□□ -0.47
TSPAN1-201ENST00000372003 PAX7P23759 505 aa12.11□□□□□ -0.47
TSPAN1-201ENST00000372003 SLC18A1P54219 525 aa12.11□□□□□ -0.47
TSPAN1-201ENST00000372003 KCNJ2P63252 427 aa12.11□□□□□ -0.47
TSPAN1-201ENST00000372003 MRPS6P82932 125 aaKnown RBP12.11□□□□□ -0.47
TSPAN1-201ENST00000372003 CETN1Q12798 172 aa12.11□□□□□ -0.47
TSPAN1-201ENST00000372003 PTPROQ16827 1216 aa12.11□□□□□ -0.47
TSPAN1-201ENST00000372003 CCDC38Q502W7 563 aa12.11□□□□□ -0.47
TSPAN1-201ENST00000372003 RHBDF2Q6PJF5 856 aa12.11□□□□□ -0.47
TSPAN1-201ENST00000372003 LRRC8DQ7L1W4 858 aa12.11□□□□□ -0.47
TSPAN1-201ENST00000372003 RELL1Q8IUW5 271 aa12.11□□□□□ -0.47
TSPAN1-201ENST00000372003 RIBC1Q8N443 379 aaPredicted RBP12.11□□□□□ -0.47
TSPAN1-201ENST00000372003 BBOF1Q8ND07 529 aa12.11□□□□□ -0.47
TSPAN1-201ENST00000372003 MCPH1Q8NEM0 835 aa12.11□□□□□ -0.47
TSPAN1-201ENST00000372003 FBF1Q8TES7 1133 aa12.11□□□□□ -0.47
TSPAN1-201ENST00000372003 NLRP7Q8WX94 980 aa12.11□□□□□ -0.47
TSPAN1-201ENST00000372003 PSPC1Q8WXF1 523 aaKnown RBP12.11□□□□□ -0.47
TSPAN1-201ENST00000372003 BADQ92934 168 aa12.11□□□□□ -0.47
TSPAN1-201ENST00000372003 NLRP4Q96MN2 994 aa12.11□□□□□ -0.47
TSPAN1-201ENST00000372003 TMEM237Q96Q45 408 aa12.11□□□□□ -0.47
TSPAN1-201ENST00000372003 FOXP3Q9BZS1 431 aa12.11□□□□□ -0.47
TSPAN1-201ENST00000372003 CTTNBP2NLQ9P2B4 639 aa12.11□□□□□ -0.47
TSPAN1-201ENST00000372003 KLHL14Q9P2G3 628 aa12.11□□□□□ -0.47
TSPAN1-201ENST00000372003 COG5Q9UP83 839 aa12.11□□□□□ -0.47
TSPAN1-201ENST00000372003 CDY2AQ9Y6F7 541 aa12.11□□□□□ -0.47
TSPAN1-201ENST00000372003 ZMYM2Q9UBW7 1377 aa12.11□□□□□ -0.47
TSPAN1-201ENST00000372003 ADGRA3Q8IWK6 1321 aa12.1□□□□□ -0.47
TSPAN1-201ENST00000372003 TMEM120BA0PK00 339 aa12.1□□□□□ -0.47
TSPAN1-201ENST00000372003 PITPNM1O00562 1244 aa12.1□□□□□ -0.47
TSPAN1-201ENST00000372003 GAS2O43903 313 aaKnown RBP12.1□□□□□ -0.47
TSPAN1-201ENST00000372003 HIP1RO75146 1068 aa12.1□□□□□ -0.47
TSPAN1-201ENST00000372003 SMNDC1O75940 238 aaKnown RBP eCLIP12.1□□□□□ -0.47
TSPAN1-201ENST00000372003 FAM13AO94988 1023 aa12.1□□□□□ -0.47
TSPAN1-201ENST00000372003 ATP2A2P16615 1042 aaKnown RBP12.1□□□□□ -0.47
TSPAN1-201ENST00000372003 ABCB4P21439 1286 aa12.1□□□□□ -0.47
TSPAN1-201ENST00000372003 ARL2P36404 184 aa12.1□□□□□ -0.47
TSPAN1-201ENST00000372003 MYL7Q01449 175 aa12.1□□□□□ -0.47
TSPAN1-201ENST00000372003 LAMTOR4Q0VGL1 99 aa12.1□□□□□ -0.47
TSPAN1-201ENST00000372003 STRN3Q13033 797 aa12.1□□□□□ -0.47
TSPAN1-201ENST00000372003 NR1H3Q13133 447 aa12.1□□□□□ -0.47
TSPAN1-201ENST00000372003 ZNF211Q13398 564 aaPredicted RBP12.1□□□□□ -0.47
TSPAN1-201ENST00000372003 BLMHQ13867 455 aa12.1□□□□□ -0.47
TSPAN1-201ENST00000372003 C11orf91Q3C1V1 193 aa12.1□□□□□ -0.47
TSPAN1-201ENST00000372003 CDCA2Q69YH5 1023 aaPredicted RBP12.1□□□□□ -0.47
TSPAN1-201ENST00000372003 TTC27Q6P3X3 843 aa12.1□□□□□ -0.47
TSPAN1-201ENST00000372003 VSTM1Q6UX27 236 aa12.1□□□□□ -0.47
TSPAN1-201ENST00000372003 DEFB128Q7Z7B8 93 aa12.1□□□□□ -0.47
TSPAN1-201ENST00000372003 DNAAF5Q86Y56 855 aa12.1□□□□□ -0.47
TSPAN1-201ENST00000372003 CCDC105Q8IYK2 499 aa12.1□□□□□ -0.47
TSPAN1-201ENST00000372003 AGGF1Q8N302 714 aaeCLIP12.1□□□□□ -0.47
TSPAN1-201ENST00000372003 GRK7Q8WTQ7 553 aa12.1□□□□□ -0.47
TSPAN1-201ENST00000372003 OSMRQ99650 979 aa12.1□□□□□ -0.47
TSPAN1-201ENST00000372003 UVRAGQ9P2Y5 699 aa12.1□□□□□ -0.47
TSPAN1-201ENST00000372003 TRPV2Q9Y5S1 764 aa12.1□□□□□ -0.47
TSPAN1-201ENST00000372003 A0A087WZ62 844 aa12.09□□□□□ -0.47
TSPAN1-201ENST00000372003 FSCN2O14926 492 aa12.09□□□□□ -0.47
TSPAN1-201ENST00000372003 CLIC2O15247 247 aa12.09□□□□□ -0.47
TSPAN1-201ENST00000372003 MAPK13O15264 365 aa12.09□□□□□ -0.47
TSPAN1-201ENST00000372003 GPR32O75388 356 aa12.09□□□□□ -0.47
TSPAN1-201ENST00000372003 CSDE1O75534 798 aaKnown RBP12.09□□□□□ -0.47
TSPAN1-201ENST00000372003 UNC5CO95185 931 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms