RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 EXTL3O43909 919 aa14.16□□□□□ -0.14
RPF1-201ENST00000370654 ATP2C2O75185 946 aa14.16□□□□□ -0.14
RPF1-201ENST00000370654 PRPF40AO75400 957 aaKnown RBP14.16□□□□□ -0.14
RPF1-201ENST00000370654 GARTP22102 1010 aa14.16□□□□□ -0.14
RPF1-201ENST00000370654 WEE1P30291 646 aa14.16□□□□□ -0.14
RPF1-201ENST00000370654 CXCL12P48061 93 aa14.16□□□□□ -0.14
RPF1-201ENST00000370654 NASPP49321 788 aaPredicted RBP14.16□□□□□ -0.14
RPF1-201ENST00000370654 FNTBP49356 437 aa14.16□□□□□ -0.14
RPF1-201ENST00000370654 MLLT6P55198 1093 aaPredicted RBP14.16□□□□□ -0.14
RPF1-201ENST00000370654 VEPH1Q14D04 833 aa14.16□□□□□ -0.14
RPF1-201ENST00000370654 E2F4Q16254 413 aa14.16□□□□□ -0.14
RPF1-201ENST00000370654 RSPO4Q2I0M5 234 aaPredicted RBP14.16□□□□□ -0.14
RPF1-201ENST00000370654 CCDC73Q6ZRK6 1079 aa14.16□□□□□ -0.14
RPF1-201ENST00000370654 NT5DC4Q86YG4 428 aa14.16□□□□□ -0.14
RPF1-201ENST00000370654 CBWD2Q8IUF1 395 aa14.16□□□□□ -0.14
RPF1-201ENST00000370654 SYCP3Q8IZU3 236 aa14.16□□□□□ -0.14
RPF1-201ENST00000370654 CMTM8Q8IZV2 173 aa14.16□□□□□ -0.14
RPF1-201ENST00000370654 LINC00301Q8NCQ3 95 aa14.16□□□□□ -0.14
RPF1-201ENST00000370654 ZNF560Q96MR9 790 aa14.16□□□□□ -0.14
RPF1-201ENST00000370654 C8orf33Q9H7E9 229 aaPredicted RBP14.16□□□□□ -0.14
RPF1-201ENST00000370654 GKN1Q9NS71 199 aa14.16□□□□□ -0.14
RPF1-201ENST00000370654 DDX43Q9NXZ2 648 aaKnown RBP14.16□□□□□ -0.14
RPF1-201ENST00000370654 OBP2AQ9NY56 170 aa14.16□□□□□ -0.14
RPF1-201ENST00000370654 DLL3Q9NYJ7 618 aa14.16□□□□□ -0.14
RPF1-201ENST00000370654 GTF3C4Q9UKN8 822 aa14.16□□□□□ -0.14
RPF1-201ENST00000370654 MAGED2Q9UNF1 606 aaPredicted RBP14.16□□□□□ -0.14
RPF1-201ENST00000370654 PCDHB5Q9Y5E4 795 aa14.16□□□□□ -0.14
RPF1-201ENST00000370654 PCDHB13Q9Y5F0 798 aa14.16□□□□□ -0.14
RPF1-201ENST00000370654 MORC2Q9Y6X9 1032 aaPredicted RBP14.16□□□□□ -0.14
RPF1-201ENST00000370654 STX6O43752 255 aa14.15□□□□□ -0.14
RPF1-201ENST00000370654 FGF19O95750 216 aa14.15□□□□□ -0.14
RPF1-201ENST00000370654 KRT19P08727 400 aa14.15□□□□□ -0.14
RPF1-201ENST00000370654 ARSAP15289 507 aa14.15□□□□□ -0.14
RPF1-201ENST00000370654 CASP1P29466 404 aa14.15□□□□□ -0.14
RPF1-201ENST00000370654 CDC25CP30307 473 aa14.15□□□□□ -0.14
RPF1-201ENST00000370654 TXLNAP40222 546 aa14.15□□□□□ -0.14
RPF1-201ENST00000370654 CCR3P51677 355 aa14.15□□□□□ -0.14
RPF1-201ENST00000370654 FOXK2Q01167 660 aa14.15□□□□□ -0.14
RPF1-201ENST00000370654 SOWAHAQ2M3V2 549 aa14.15□□□□□ -0.14
RPF1-201ENST00000370654 ARHGAP29Q52LW3 1261 aa14.15□□□□□ -0.14
RPF1-201ENST00000370654 INTS6LQ5JSJ4 861 aaKnown RBP14.15□□□□□ -0.14
RPF1-201ENST00000370654 FOXD4L5Q5VV16 416 aaPredicted RBP14.15□□□□□ -0.14
RPF1-201ENST00000370654 DCP1BQ8IZD4 617 aaKnown RBP14.15□□□□□ -0.14
RPF1-201ENST00000370654 C2orf15Q8WU43 125 aaKnown RBP14.15□□□□□ -0.14
RPF1-201ENST00000370654 FOXD4L4Q8WXT5 416 aaPredicted RBP14.15□□□□□ -0.14
RPF1-201ENST00000370654 INTS4Q96HW7 963 aaKnown RBP14.15□□□□□ -0.14
RPF1-201ENST00000370654 SLC22A12Q96S37 553 aa14.15□□□□□ -0.14
RPF1-201ENST00000370654 FAM83CQ9BQN1 747 aa14.15□□□□□ -0.14
RPF1-201ENST00000370654 BACH2Q9BYV9 841 aa14.15□□□□□ -0.14
RPF1-201ENST00000370654 FBRSL1Q9HCM7 1045 aaKnown RBP14.15□□□□□ -0.14
RPF1-201ENST00000370654 NME7Q9Y5B8 376 aa14.15□□□□□ -0.14
RPF1-201ENST00000370654 SNX9Q9Y5X1 595 aa14.15□□□□□ -0.14
RPF1-201ENST00000370654 GABRDO14764 452 aa14.14□□□□□ -0.15
RPF1-201ENST00000370654 LMO2P25791 158 aa14.14□□□□□ -0.15
RPF1-201ENST00000370654 PNPLA4P41247 253 aa14.14□□□□□ -0.15
RPF1-201ENST00000370654 CCINQ13939 588 aa14.14□□□□□ -0.15
RPF1-201ENST00000370654 TAF12Q16514 161 aa14.14□□□□□ -0.15
RPF1-201ENST00000370654 HEATR6Q6AI08 1181 aaKnown RBP14.14□□□□□ -0.15
RPF1-201ENST00000370654 SHC4Q6S5L8 630 aa14.14□□□□□ -0.15
RPF1-201ENST00000370654 DGLUCYQ7Z3D6 616 aa14.14□□□□□ -0.15
RPF1-201ENST00000370654 RALGPS2Q86X27 583 aaPredicted RBP14.14□□□□□ -0.15
RPF1-201ENST00000370654 GPD1LQ8N335 351 aa14.14□□□□□ -0.15
RPF1-201ENST00000370654 SPEM1Q8N4L4 309 aa14.14□□□□□ -0.15
RPF1-201ENST00000370654 CELF5Q8N6W0 485 aaKnown RBP14.14□□□□□ -0.15
RPF1-201ENST00000370654 LRRC52Q8N7C0 313 aa14.14□□□□□ -0.15
RPF1-201ENST00000370654 KBTBD7Q8WVZ9 684 aa14.14□□□□□ -0.15
RPF1-201ENST00000370654 CYP2S1Q96SQ9 504 aa14.14□□□□□ -0.15
RPF1-201ENST00000370654 ACBD6Q9BR61 282 aa14.14□□□□□ -0.15
RPF1-201ENST00000370654 FAM126AQ9BYI3 521 aaPredicted RBP14.14□□□□□ -0.15
RPF1-201ENST00000370654 EBF3Q9H4W6 596 aa14.14□□□□□ -0.15
RPF1-201ENST00000370654 GDAP2Q9NXN4 497 aa14.14□□□□□ -0.15
RPF1-201ENST00000370654 ITGA11Q9UKX5 1188 aa14.14□□□□□ -0.15
RPF1-201ENST00000370654 CACNA1AO00555 2505 aa14.14□□□□□ -0.15
RPF1-201ENST00000370654 K7ELQ4 463 aaPredicted RBP14.13□□□□□ -0.15
RPF1-201ENST00000370654 TGFB1I1O43294 461 aa14.13□□□□□ -0.15
RPF1-201ENST00000370654 HUS1O60921 280 aa14.13□□□□□ -0.15
RPF1-201ENST00000370654 LDHAP00338 332 aaKnown RBP14.13□□□□□ -0.15
RPF1-201ENST00000370654 PSMC1P62191 440 aaKnown RBP14.13□□□□□ -0.15
RPF1-201ENST00000370654 RBP5P82980 135 aa14.13□□□□□ -0.15
RPF1-201ENST00000370654 TSPY1Q01534 308 aa14.13□□□□□ -0.15
RPF1-201ENST00000370654 SMARCB1Q12824 385 aa14.13□□□□□ -0.15
RPF1-201ENST00000370654 PUM1Q14671 1186 aaKnown RBP eCLIP14.13□□□□□ -0.15
RPF1-201ENST00000370654 STK38Q15208 465 aa14.13□□□□□ -0.15
RPF1-201ENST00000370654 FOXD4L6Q3SYB3 417 aaPredicted RBP14.13□□□□□ -0.15
RPF1-201ENST00000370654 FSTL4Q6MZW2 842 aa14.13□□□□□ -0.15
RPF1-201ENST00000370654 FOXD4L3Q6VB84 417 aaPredicted RBP14.13□□□□□ -0.15
RPF1-201ENST00000370654 EPM2AIP1Q7L775 607 aaPredicted RBP14.13□□□□□ -0.15
RPF1-201ENST00000370654 LIMS2Q7Z4I7 341 aa14.13□□□□□ -0.15
RPF1-201ENST00000370654 ADGRF2Q8IZF7 708 aa14.13□□□□□ -0.15
RPF1-201ENST00000370654 CACTINQ8WUQ7 758 aaKnown RBP14.13□□□□□ -0.15
RPF1-201ENST00000370654 LEO1Q8WVC0 666 aaPredicted RBP14.13□□□□□ -0.15
RPF1-201ENST00000370654 IER2Q9BTL4 223 aa14.13□□□□□ -0.15
RPF1-201ENST00000370654 TRIM9Q9C026 710 aa14.13□□□□□ -0.15
RPF1-201ENST00000370654 CRTAC1Q9NQ79 661 aa14.13□□□□□ -0.15
RPF1-201ENST00000370654 INTS13Q9NVM9 706 aa14.13□□□□□ -0.15
RPF1-201ENST00000370654 KBTBD4Q9NVX7 518 aa14.13□□□□□ -0.15
RPF1-201ENST00000370654 ATG2BQ96BY7 2078 aa14.12□□□□□ -0.15
RPF1-201ENST00000370654 SPTLC2O15270 562 aa14.12□□□□□ -0.15
RPF1-201ENST00000370654 NOL4O94818 638 aa14.12□□□□□ -0.15
RPF1-201ENST00000370654 CST3P01034 146 aaPredicted RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms