RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 PPM1KQ8N3J5 372 aa14.68□□□□□ -0.06
SSR4-202ENST00000370085 B3GALNT2Q8NCR0 500 aa14.68□□□□□ -0.06
SSR4-202ENST00000370085 SMG7Q92540 1137 aaKnown RBP14.68□□□□□ -0.06
SSR4-202ENST00000370085 ANP32EQ9BTT0 268 aa14.68□□□□□ -0.06
SSR4-202ENST00000370085 NT5C1AQ9BXI3 368 aa14.68□□□□□ -0.06
SSR4-202ENST00000370085 PRKD2Q9BZL6 878 aa14.68□□□□□ -0.06
SSR4-202ENST00000370085 INTS2Q9H0H0 1204 aaKnown RBP14.68□□□□□ -0.06
SSR4-202ENST00000370085 APOBEC3GQ9HC16 384 aaKnown RBP14.68□□□□□ -0.06
SSR4-202ENST00000370085 ABI2Q9NYB9 513 aaPredicted RBP14.68□□□□□ -0.06
SSR4-202ENST00000370085 INSL5Q9Y5Q6 135 aa14.68□□□□□ -0.06
SSR4-202ENST00000370085 PTPN1P18031 435 aaKnown RBP14.67□□□□□ -0.06
SSR4-202ENST00000370085 CD58P19256 250 aa14.67□□□□□ -0.06
SSR4-202ENST00000370085 LMO2P25791 158 aa14.67□□□□□ -0.06
SSR4-202ENST00000370085 NDST1P52848 882 aa14.67□□□□□ -0.06
SSR4-202ENST00000370085 RPL10AP62906 217 aaKnown RBP14.67□□□□□ -0.06
SSR4-202ENST00000370085 CYP27A1Q02318 531 aa14.67□□□□□ -0.06
SSR4-202ENST00000370085 GCNT1Q02742 428 aa14.67□□□□□ -0.06
SSR4-202ENST00000370085 TFF2Q03403 129 aa14.67□□□□□ -0.06
SSR4-202ENST00000370085 LRMPQ12912 555 aa14.67□□□□□ -0.06
SSR4-202ENST00000370085 DUSP4Q13115 394 aa14.67□□□□□ -0.06
SSR4-202ENST00000370085 KRT31Q15323 416 aa14.67□□□□□ -0.06
SSR4-202ENST00000370085 TAF12Q16514 161 aa14.67□□□□□ -0.06
SSR4-202ENST00000370085 MGAT5BQ3V5L5 792 aa14.67□□□□□ -0.06
SSR4-202ENST00000370085 GPR149Q86SP6 731 aa14.67□□□□□ -0.06
SSR4-202ENST00000370085 ITIH5Q86UX2 942 aa14.67□□□□□ -0.06
SSR4-202ENST00000370085 MYCBPAPQ8TBZ2 947 aa14.67□□□□□ -0.06
SSR4-202ENST00000370085 FAM200AQ8TCP9 573 aa14.67□□□□□ -0.06
SSR4-202ENST00000370085 JAKMIP2Q96AA8 810 aa14.67□□□□□ -0.06
SSR4-202ENST00000370085 ZNF512Q96ME7 567 aaPredicted RBP14.67□□□□□ -0.06
SSR4-202ENST00000370085 ASB2Q96Q27 587 aa14.67□□□□□ -0.06
SSR4-202ENST00000370085 TMEM209Q96SK2 561 aa14.67□□□□□ -0.06
SSR4-202ENST00000370085 SEPT5Q99719 369 aaPredicted RBP14.67□□□□□ -0.06
SSR4-202ENST00000370085 APOL5Q9BWW9 433 aa14.67□□□□□ -0.06
SSR4-202ENST00000370085 TSPY26PQ9H489 355 aa14.67□□□□□ -0.06
SSR4-202ENST00000370085 PRDM6Q9NQX0 595 aa14.67□□□□□ -0.06
SSR4-202ENST00000370085 GTF3C4Q9UKN8 822 aa14.67□□□□□ -0.06
SSR4-202ENST00000370085 ASB3Q9Y575 518 aa14.67□□□□□ -0.06
SSR4-202ENST00000370085 MBTPS2O43462 519 aa14.66□□□□□ -0.06
SSR4-202ENST00000370085 RFPL2O75678 378 aa14.66□□□□□ -0.06
SSR4-202ENST00000370085 MFAP3P55082 362 aa14.66□□□□□ -0.06
SSR4-202ENST00000370085 PSMC1P62191 440 aaKnown RBP14.66□□□□□ -0.06
SSR4-202ENST00000370085 CBX2Q14781 532 aaPredicted RBP14.66□□□□□ -0.06
SSR4-202ENST00000370085 CFAP221Q4G0U5 840 aa14.66□□□□□ -0.06
SSR4-202ENST00000370085 MDH1BQ5I0G3 518 aa14.66□□□□□ -0.06
SSR4-202ENST00000370085 SMYD5Q6GMV2 418 aa14.66□□□□□ -0.06
SSR4-202ENST00000370085 FAM171BQ6P995 826 aa14.66□□□□□ -0.06
SSR4-202ENST00000370085 LRSAM1Q6UWE0 723 aa14.66□□□□□ -0.06
SSR4-202ENST00000370085 VSTM1Q6UX27 236 aa14.66□□□□□ -0.06
SSR4-202ENST00000370085 DHX40Q8IX18 779 aaKnown RBP14.66□□□□□ -0.06
SSR4-202ENST00000370085 C12orf76Q8N812 135 aaPredicted RBP14.66□□□□□ -0.06
SSR4-202ENST00000370085 ATAD1Q8NBU5 361 aa14.66□□□□□ -0.06
SSR4-202ENST00000370085 LEMD2Q8NC56 503 aa14.66□□□□□ -0.06
SSR4-202ENST00000370085 TATDN2Q93075 761 aa14.66□□□□□ -0.06
SSR4-202ENST00000370085 CRACR2AQ9BSW2 395 aa14.66□□□□□ -0.06
SSR4-202ENST00000370085 MED10Q9BTT4 135 aa14.66□□□□□ -0.06
SSR4-202ENST00000370085 ELOVL4Q9GZR5 314 aa14.66□□□□□ -0.06
SSR4-202ENST00000370085 S1PR5Q9H228 398 aa14.66□□□□□ -0.06
SSR4-202ENST00000370085 VPS16Q9H269 839 aa14.66□□□□□ -0.06
SSR4-202ENST00000370085 CISHQ9NSE2 258 aa14.66□□□□□ -0.06
SSR4-202ENST00000370085 TAB2Q9NYJ8 693 aa14.66□□□□□ -0.06
SSR4-202ENST00000370085 LIMA1Q9UHB6 759 aaKnown RBP14.66□□□□□ -0.06
SSR4-202ENST00000370085 USP15Q9Y4E8 981 aaPredicted RBP14.66□□□□□ -0.06
SSR4-202ENST00000370085 YIPF1Q9Y548 306 aa14.66□□□□□ -0.06
SSR4-202ENST00000370085 MYBPHLA2RUH7 354 aa14.65□□□□□ -0.06
SSR4-202ENST00000370085 GRXCR2A6NFK2 248 aa14.65□□□□□ -0.06
SSR4-202ENST00000370085 TRIM66O15016 1216 aa14.65□□□□□ -0.06
SSR4-202ENST00000370085 CCL16O15467 120 aa14.65□□□□□ -0.06
SSR4-202ENST00000370085 CILPO75339 1184 aa14.65□□□□□ -0.06
SSR4-202ENST00000370085 SEC24AO95486 1093 aa14.65□□□□□ -0.06
SSR4-202ENST00000370085 FGF19O95750 216 aa14.65□□□□□ -0.06
SSR4-202ENST00000370085 ZNF18P17022 549 aa14.65□□□□□ -0.06
SSR4-202ENST00000370085 PTPN2P17706 415 aa14.65□□□□□ -0.06
SSR4-202ENST00000370085 RFX1P22670 979 aa14.65□□□□□ -0.06
SSR4-202ENST00000370085 ANXA13P27216 316 aa14.65□□□□□ -0.06
SSR4-202ENST00000370085 MAGEA11P43364 429 aa14.65□□□□□ -0.06
SSR4-202ENST00000370085 COPB1P53618 953 aaKnown RBP14.65□□□□□ -0.06
SSR4-202ENST00000370085 TWF1Q12792 350 aa14.65□□□□□ -0.06
SSR4-202ENST00000370085 NCAPHQ15003 741 aa14.65□□□□□ -0.06
SSR4-202ENST00000370085 SMAD2Q15796 467 aaKnown RBP14.65□□□□□ -0.06
SSR4-202ENST00000370085 MIIPQ5JXC2 388 aa14.65□□□□□ -0.06
SSR4-202ENST00000370085 TRIM65Q6PJ69 517 aa14.65□□□□□ -0.06
SSR4-202ENST00000370085 ACOT1Q86TX2 421 aa14.65□□□□□ -0.06
SSR4-202ENST00000370085 LRRTM3Q86VH5 581 aa14.65□□□□□ -0.06
SSR4-202ENST00000370085 CRYBG2Q8N1P7 616 aa14.65□□□□□ -0.06
SSR4-202ENST00000370085 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.65□□□□□ -0.06
SSR4-202ENST00000370085 LMO3Q8TAP4 145 aa14.65□□□□□ -0.06
SSR4-202ENST00000370085 ELMO3Q96BJ8 720 aa14.65□□□□□ -0.06
SSR4-202ENST00000370085 CEP295NLQ96MC4 621 aa14.65□□□□□ -0.06
SSR4-202ENST00000370085 SDCBP2Q9H190 292 aa14.65□□□□□ -0.06
SSR4-202ENST00000370085 CBX8Q9HC52 389 aa14.65□□□□□ -0.06
SSR4-202ENST00000370085 UBE2TQ9NPD8 197 aaPredicted RBP14.65□□□□□ -0.06
SSR4-202ENST00000370085 EHD2Q9NZN4 543 aa14.65□□□□□ -0.06
SSR4-202ENST00000370085 APEX2Q9UBZ4 518 aa14.65□□□□□ -0.06
SSR4-202ENST00000370085 SLC27A5Q9Y2P5 690 aa14.65□□□□□ -0.06
SSR4-202ENST00000370085 NR2E1Q9Y466 385 aa14.65□□□□□ -0.06
SSR4-202ENST00000370085 XIRP2A4UGR9 3374 aa14.65□□□□□ -0.06
SSR4-202ENST00000370085 LRRC10BA6NIK2 292 aa14.64□□□□□ -0.07
SSR4-202ENST00000370085 ZNF197O14709 1029 aa14.64□□□□□ -0.07
SSR4-202ENST00000370085 ATP2C2O75185 946 aa14.64□□□□□ -0.07
SSR4-202ENST00000370085 PAPLNO95428 1278 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms