RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 ABHD14A-ACY1A0A1B0GW23 586 aa18.38■□□□□ 0.53
UBE3D-203ENST00000369747 ZSCAN5CA6NGD5 496 aaPredicted RBP18.38■□□□□ 0.53
UBE3D-203ENST00000369747 RAD51CO43502 376 aa18.38■□□□□ 0.53
UBE3D-203ENST00000369747 PFKMP08237 780 aa18.38■□□□□ 0.53
UBE3D-203ENST00000369747 IGFBP6P24592 240 aaPredicted RBP18.38■□□□□ 0.53
UBE3D-203ENST00000369747 NOP14P78316 857 aaKnown RBP18.38■□□□□ 0.53
UBE3D-203ENST00000369747 CUL2Q13617 745 aa18.38■□□□□ 0.53
UBE3D-203ENST00000369747 TERF2Q15554 542 aa18.38■□□□□ 0.53
UBE3D-203ENST00000369747 ACAD10Q6JQN1 1059 aa18.38■□□□□ 0.53
UBE3D-203ENST00000369747 FAM43BQ6ZT52 329 aaPredicted RBP18.38■□□□□ 0.53
UBE3D-203ENST00000369747 PAAF1Q9BRP4 392 aa18.38■□□□□ 0.53
UBE3D-203ENST00000369747 AP1M1Q9BXS5 423 aa18.38■□□□□ 0.53
UBE3D-203ENST00000369747 POLR3GO15318 223 aaPredicted RBP18.37■□□□□ 0.53
UBE3D-203ENST00000369747 B4GALT3O60512 393 aa18.37■□□□□ 0.53
UBE3D-203ENST00000369747 DEFB103AP81534 67 aa18.37■□□□□ 0.53
UBE3D-203ENST00000369747 PPIGQ13427 754 aaKnown RBP eCLIP18.37■□□□□ 0.53
UBE3D-203ENST00000369747 SGSM1Q2NKQ1 1148 aa18.37■□□□□ 0.53
UBE3D-203ENST00000369747 C9orf57Q5W0N0 161 aa18.37■□□□□ 0.53
UBE3D-203ENST00000369747 ZNF365Q70YC5 407 aa18.37■□□□□ 0.53
UBE3D-203ENST00000369747 IFT20Q8IY31 132 aa18.37■□□□□ 0.53
UBE3D-203ENST00000369747 ZBTB9Q96C00 473 aa18.37■□□□□ 0.53
UBE3D-203ENST00000369747 ZNF653Q96CK0 615 aa18.37■□□□□ 0.53
UBE3D-203ENST00000369747 TSPAN18Q96SJ8 248 aa18.37■□□□□ 0.53
UBE3D-203ENST00000369747 CARD9Q9H257 536 aa18.37■□□□□ 0.53
UBE3D-203ENST00000369747 PLEKHA4Q9H4M7 779 aa18.37■□□□□ 0.53
UBE3D-203ENST00000369747 CASTOR2A6NHX0 329 aa18.37■□□□□ 0.53
UBE3D-203ENST00000369747 INPPL1O15357 1258 aa18.37■□□□□ 0.53
UBE3D-203ENST00000369747 UNGP13051 313 aaPredicted RBP18.37■□□□□ 0.53
UBE3D-203ENST00000369747 WDR5P61964 334 aaKnown RBP18.37■□□□□ 0.53
UBE3D-203ENST00000369747 RBP5P82980 135 aa18.37■□□□□ 0.53
UBE3D-203ENST00000369747 GUCY2DQ02846 1103 aa18.37■□□□□ 0.53
UBE3D-203ENST00000369747 GPS2Q13227 327 aa18.37■□□□□ 0.53
UBE3D-203ENST00000369747 ZNF699Q32M78 642 aa18.37■□□□□ 0.53
UBE3D-203ENST00000369747 NOMO2Q5JPE7 1267 aa18.37■□□□□ 0.53
UBE3D-203ENST00000369747 ZNF677Q86XU0 584 aa18.37■□□□□ 0.53
UBE3D-203ENST00000369747 NPAS4Q8IUM7 802 aa18.37■□□□□ 0.53
UBE3D-203ENST00000369747 ALG3Q92685 438 aa18.37■□□□□ 0.53
UBE3D-203ENST00000369747 NUP85Q9BW27 656 aa18.37■□□□□ 0.53
UBE3D-203ENST00000369747 IMPG2Q9BZV3 1241 aa18.37■□□□□ 0.53
UBE3D-203ENST00000369747 EPB41L5Q9HCM4 733 aa18.37■□□□□ 0.53
UBE3D-203ENST00000369747 SLC38A7Q9NVC3 462 aa18.37■□□□□ 0.53
UBE3D-203ENST00000369747 CCDC188H7C350 402 aa18.36■□□□□ 0.53
UBE3D-203ENST00000369747 KRIT1O00522 736 aa18.36■□□□□ 0.53
UBE3D-203ENST00000369747 PIRO00625 290 aa18.36■□□□□ 0.53
UBE3D-203ENST00000369747 XPOTO43592 962 aaKnown RBP18.36■□□□□ 0.53
UBE3D-203ENST00000369747 CYP3A5P20815 502 aa18.36■□□□□ 0.53
UBE3D-203ENST00000369747 CLCNKBP51801 687 aa18.36■□□□□ 0.53
UBE3D-203ENST00000369747 GRIK3Q13003 919 aa18.36■□□□□ 0.53
UBE3D-203ENST00000369747 WDR72Q3MJ13 1102 aa18.36■□□□□ 0.53
UBE3D-203ENST00000369747 ZNF280BQ86YH2 543 aa18.36■□□□□ 0.53
UBE3D-203ENST00000369747 ABI1Q8IZP0 508 aa18.36■□□□□ 0.53
UBE3D-203ENST00000369747 ZNF564Q8TBZ8 553 aaPredicted RBP18.36■□□□□ 0.53
UBE3D-203ENST00000369747 HPDLQ96IR7 371 aa18.36■□□□□ 0.53
UBE3D-203ENST00000369747 CASD1Q96PB1 797 aa18.36■□□□□ 0.53
UBE3D-203ENST00000369747 TBC1D13Q9NVG8 400 aa18.36■□□□□ 0.53
UBE3D-203ENST00000369747 ESYT3A0FGR9 886 aa18.35■□□□□ 0.53
UBE3D-203ENST00000369747 TMEM110-MUSTN1A8MSY1 372 aa18.35■□□□□ 0.53
UBE3D-203ENST00000369747 FGGP02679 453 aa18.35■□□□□ 0.53
UBE3D-203ENST00000369747 AARSP49588 968 aaKnown RBP eCLIP18.35■□□□□ 0.53
UBE3D-203ENST00000369747 CARSP49589 748 aaKnown RBP18.35■□□□□ 0.53
UBE3D-203ENST00000369747 BPIFB4P59827 614 aa18.35■□□□□ 0.53
UBE3D-203ENST00000369747 MESDQ14696 234 aa18.35■□□□□ 0.53
UBE3D-203ENST00000369747 FAM117BQ6P1L5 589 aa18.35■□□□□ 0.53
UBE3D-203ENST00000369747 SND1Q7KZF4 910 aaKnown RBP eCLIP18.35■□□□□ 0.53
UBE3D-203ENST00000369747 CASKIN2Q8WXE0 1202 aa18.35■□□□□ 0.53
UBE3D-203ENST00000369747 TOP1MTQ969P6 601 aa18.35■□□□□ 0.53
UBE3D-203ENST00000369747 RNPC3Q96LT9 517 aaKnown RBP18.35■□□□□ 0.53
UBE3D-203ENST00000369747 ACBD3Q9H3P7 528 aa18.35■□□□□ 0.53
UBE3D-203ENST00000369747 UVRAGQ9P2Y5 699 aa18.35■□□□□ 0.53
UBE3D-203ENST00000369747 HCSTQ9UBK5 93 aa18.35■□□□□ 0.53
UBE3D-203ENST00000369747 NXF1Q9UBU9 619 aaKnown RBP18.35■□□□□ 0.53
UBE3D-203ENST00000369747 CNTN6Q9UQ52 1028 aa18.35■□□□□ 0.53
UBE3D-203ENST00000369747 MIF4GDA9UHW6 222 aaKnown RBP18.35■□□□□ 0.53
UBE3D-203ENST00000369747 DDHD2O94830 711 aa18.35■□□□□ 0.53
UBE3D-203ENST00000369747 FGBP02675 491 aa18.35■□□□□ 0.53
UBE3D-203ENST00000369747 COMTP21964 271 aa18.35■□□□□ 0.53
UBE3D-203ENST00000369747 TBXAS1P24557 533 aaPredicted RBP18.35■□□□□ 0.53
UBE3D-203ENST00000369747 LRPAP1P30533 357 aa18.35■□□□□ 0.53
UBE3D-203ENST00000369747 EMBQ6PCB8 327 aa18.35■□□□□ 0.53
UBE3D-203ENST00000369747 KRT35Q92764 455 aa18.35■□□□□ 0.53
UBE3D-203ENST00000369747 CD101Q93033 1021 aa18.35■□□□□ 0.53
UBE3D-203ENST00000369747 CAVIN3Q969G5 261 aa18.35■□□□□ 0.53
UBE3D-203ENST00000369747 DDX47Q9H0S4 455 aaKnown RBP18.35■□□□□ 0.53
UBE3D-203ENST00000369747 CXXC1Q9P0U4 656 aaPredicted RBP18.35■□□□□ 0.53
UBE3D-203ENST00000369747 POLIQ9UNA4 740 aa18.35■□□□□ 0.53
UBE3D-203ENST00000369747 CDH23Q9H251 3354 aa18.34■□□□□ 0.53
UBE3D-203ENST00000369747 BHMG1C9JSJ3 638 aaPredicted RBP18.34■□□□□ 0.53
UBE3D-203ENST00000369747 SPTLC1O15269 473 aa18.34■□□□□ 0.53
UBE3D-203ENST00000369747 SART1O43290 800 aaKnown RBP18.34■□□□□ 0.53
UBE3D-203ENST00000369747 MARCKSL1P49006 195 aa18.34■□□□□ 0.53
UBE3D-203ENST00000369747 TMEM240Q5SV17 173 aa18.34■□□□□ 0.53
UBE3D-203ENST00000369747 TMEM270Q6UE05 265 aa18.34■□□□□ 0.53
UBE3D-203ENST00000369747 C3orf58Q8NDZ4 430 aa18.34■□□□□ 0.53
UBE3D-203ENST00000369747 URGCPQ8TCY9 931 aa18.34■□□□□ 0.53
UBE3D-203ENST00000369747 BTBD6Q96KE9 485 aa18.34■□□□□ 0.53
UBE3D-203ENST00000369747 ZSWIM1Q9BR11 485 aa18.34■□□□□ 0.53
UBE3D-203ENST00000369747 CNOT8Q9UFF9 292 aaKnown RBP18.34■□□□□ 0.53
UBE3D-203ENST00000369747 PCDHB4Q9Y5E5 795 aa18.34■□□□□ 0.53
UBE3D-203ENST00000369747 FNDC1Q4ZHG4 1894 aaPredicted RBP18.34■□□□□ 0.53
UBE3D-203ENST00000369747 ZBBXA8MT70 800 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms