RNA–Protein interactions for RNA: ENST00000368213.9

PTPRK-205, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-205ENST00000368213 TKTL1P51854 596 aa11.24□□□□□ -0.61
PTPRK-205ENST00000368213 CAPRIN1Q14444 709 aaKnown RBP11.24□□□□□ -0.61
PTPRK-205ENST00000368213 TBCCQ15814 346 aa11.24□□□□□ -0.61
PTPRK-205ENST00000368213 NOMO2Q5JPE7 1267 aa11.24□□□□□ -0.61
PTPRK-205ENST00000368213 HELQQ8TDG4 1101 aa11.24□□□□□ -0.61
PTPRK-205ENST00000368213 CYP3A43Q9HB55 503 aa11.24□□□□□ -0.61
PTPRK-205ENST00000368213 ARHGEF38Q9NXL2 777 aa11.24□□□□□ -0.61
PTPRK-205ENST00000368213 SNCAIPQ9Y6H5 919 aa11.24□□□□□ -0.61
PTPRK-205ENST00000368213 FAM86B1E9PN63 330 aa11.23□□□□□ -0.61
PTPRK-205ENST00000368213 ZNF263O14978 683 aa11.23□□□□□ -0.61
PTPRK-205ENST00000368213 MTSS1O43312 755 aa11.23□□□□□ -0.61
PTPRK-205ENST00000368213 APRTP07741 180 aa11.23□□□□□ -0.61
PTPRK-205ENST00000368213 FAM86B2P0C5J1 330 aa11.23□□□□□ -0.61
PTPRK-205ENST00000368213 SGCGQ13326 291 aa11.23□□□□□ -0.61
PTPRK-205ENST00000368213 SMTNL2Q2TAL5 461 aa11.23□□□□□ -0.61
PTPRK-205ENST00000368213 ZNF284Q2VY69 593 aa11.23□□□□□ -0.61
PTPRK-205ENST00000368213 SLC5A5Q92911 643 aa11.23□□□□□ -0.61
PTPRK-205ENST00000368213 MKL1Q969V6 931 aa11.23□□□□□ -0.61
PTPRK-205ENST00000368213 CAPN11Q9UMQ6 739 aa11.23□□□□□ -0.61
PTPRK-205ENST00000368213 PACSIN2Q9UNF0 486 aaPredicted RBP11.23□□□□□ -0.61
PTPRK-205ENST00000368213 YDJCA8MPS7 323 aa11.23□□□□□ -0.61
PTPRK-205ENST00000368213 NCK2O43639 380 aa11.23□□□□□ -0.61
PTPRK-205ENST00000368213 CTDNEP1O95476 244 aa11.23□□□□□ -0.61
PTPRK-205ENST00000368213 GFAPP14136 432 aa11.23□□□□□ -0.61
PTPRK-205ENST00000368213 CD52P31358 61 aa11.23□□□□□ -0.61
PTPRK-205ENST00000368213 LIG3P49916 1009 aa11.23□□□□□ -0.61
PTPRK-205ENST00000368213 MYL6P60660 151 aa11.23□□□□□ -0.61
PTPRK-205ENST00000368213 TMPRSS15P98073 1019 aa11.23□□□□□ -0.61
PTPRK-205ENST00000368213 NCLNQ969V3 563 aa11.23□□□□□ -0.61
PTPRK-205ENST00000368213 EPS15L1Q9UBC2 864 aa11.23□□□□□ -0.61
PTPRK-205ENST00000368213 ORC6Q9Y5N6 252 aa11.23□□□□□ -0.61
PTPRK-205ENST00000368213 SF3B1O75533 1304 aaKnown RBP eCLIP11.23□□□□□ -0.61
PTPRK-205ENST00000368213 CAND2O75155 1236 aa11.23□□□□□ -0.61
PTPRK-205ENST00000368213 CASP4P49662 377 aa11.23□□□□□ -0.61
PTPRK-205ENST00000368213 RGS4P49798 205 aa11.23□□□□□ -0.61
PTPRK-205ENST00000368213 FNDC3BQ53EP0 1204 aaKnown RBP11.23□□□□□ -0.61
PTPRK-205ENST00000368213 CCDC137Q6PK04 289 aaKnown RBP11.23□□□□□ -0.61
PTPRK-205ENST00000368213 VGLL2Q8N8G2 317 aa11.23□□□□□ -0.61
PTPRK-205ENST00000368213 SLC35G2Q8TBE7 412 aa11.23□□□□□ -0.61
PTPRK-205ENST00000368213 SNF8Q96H20 258 aa11.23□□□□□ -0.61
PTPRK-205ENST00000368213 UBXN6Q9BZV1 441 aa11.23□□□□□ -0.61
PTPRK-205ENST00000368213 CBX4O00257 560 aa11.23□□□□□ -0.61
PTPRK-205ENST00000368213 NDUFS2O75306 463 aa11.23□□□□□ -0.61
PTPRK-205ENST00000368213 BAG2O95816 211 aa11.23□□□□□ -0.61
PTPRK-205ENST00000368213 TYK2P29597 1187 aa11.23□□□□□ -0.61
PTPRK-205ENST00000368213 BST2Q10589 180 aaKnown RBP11.23□□□□□ -0.61
PTPRK-205ENST00000368213 EIF2B5Q13144 721 aaKnown RBP11.23□□□□□ -0.61
PTPRK-205ENST00000368213 TAF11Q15544 211 aa11.23□□□□□ -0.61
PTPRK-205ENST00000368213 IZUMO3Q5VZ72 239 aa11.23□□□□□ -0.61
PTPRK-205ENST00000368213 MAML1Q92585 1016 aa11.23□□□□□ -0.61
PTPRK-205ENST00000368213 PTPRN2Q92932 1015 aa11.23□□□□□ -0.61
PTPRK-205ENST00000368213 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.23□□□□□ -0.611e-6■□□□□ 8.7
PTPRK-205ENST00000368213 ASAH2Q9NR71 780 aa11.23□□□□□ -0.61
PTPRK-205ENST00000368213 HDAC6Q9UBN7 1215 aa11.23□□□□□ -0.61
PTPRK-205ENST00000368213 LIMA1Q9UHB6 759 aaKnown RBP11.23□□□□□ -0.61
PTPRK-205ENST00000368213 TSPAN3O60637 253 aa11.22□□□□□ -0.61
PTPRK-205ENST00000368213 AOC2O75106 756 aa11.22□□□□□ -0.61
PTPRK-205ENST00000368213 SUN1O94901 812 aa11.22□□□□□ -0.61
PTPRK-205ENST00000368213 PCK1P35558 622 aa11.22□□□□□ -0.61
PTPRK-205ENST00000368213 GALCP54803 685 aa11.22□□□□□ -0.61
PTPRK-205ENST00000368213 CYP24A1Q07973 514 aa11.22□□□□□ -0.61
PTPRK-205ENST00000368213 PABPC1LQ4VXU2 614 aaKnown RBP11.22□□□□□ -0.61
PTPRK-205ENST00000368213 MFSD4BQ5TF39 518 aa11.22□□□□□ -0.61
PTPRK-205ENST00000368213 VSIG10LQ86VR7 867 aa11.22□□□□□ -0.61
PTPRK-205ENST00000368213 PDZD8Q8NEN9 1154 aa11.22□□□□□ -0.61
PTPRK-205ENST00000368213 SMARCD1Q96GM5 515 aa11.22□□□□□ -0.61
PTPRK-205ENST00000368213 TMEM176AQ96HP8 235 aa11.22□□□□□ -0.61
PTPRK-205ENST00000368213 UROC1Q96N76 676 aa11.22□□□□□ -0.61
PTPRK-205ENST00000368213 CORO1BQ9BR76 489 aa11.22□□□□□ -0.61
PTPRK-205ENST00000368213 VCX3AQ9NNX9 186 aa11.22□□□□□ -0.61
PTPRK-205ENST00000368213 PCDHGB4Q9UN71 923 aa11.22□□□□□ -0.61
PTPRK-205ENST00000368213 RECQL4O94761 1208 aa11.22□□□□□ -0.61
PTPRK-205ENST00000368213 ARHGAP25P42331 645 aa11.22□□□□□ -0.61
PTPRK-205ENST00000368213 RARRES1P49788 294 aa11.22□□□□□ -0.61
PTPRK-205ENST00000368213 OTOP2Q7RTS6 562 aa11.22□□□□□ -0.61
PTPRK-205ENST00000368213 CRLF3Q8IUI8 442 aa11.22□□□□□ -0.61
PTPRK-205ENST00000368213 FEZF2Q8TBJ5 459 aa11.22□□□□□ -0.61
PTPRK-205ENST00000368213 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.22□□□□□ -0.61
PTPRK-205ENST00000368213 KCNA2P16389 499 aa11.22□□□□□ -0.61
PTPRK-205ENST00000368213 MRPS25P82663 173 aaKnown RBP11.22□□□□□ -0.61
PTPRK-205ENST00000368213 ADCY2Q08462 1091 aa11.22□□□□□ -0.61
PTPRK-205ENST00000368213 TNS4Q8IZW8 715 aa11.22□□□□□ -0.61
PTPRK-205ENST00000368213 MYRIPQ8NFW9 859 aa11.22□□□□□ -0.61
PTPRK-205ENST00000368213 POP1Q99575 1024 aaKnown RBP11.22□□□□□ -0.61
PTPRK-205ENST00000368213 TLE6Q9H808 572 aa11.22□□□□□ -0.61
PTPRK-205ENST00000368213 RAB6BQ9NRW1 208 aa11.22□□□□□ -0.61
PTPRK-205ENST00000368213 FBXO10Q9UK96 956 aa11.22□□□□□ -0.61
PTPRK-205ENST00000368213 TBC1D3BA6NDS4 549 aa11.22□□□□□ -0.61
PTPRK-205ENST00000368213 ZW10O43264 779 aa11.22□□□□□ -0.61
PTPRK-205ENST00000368213 PPP3CCP48454 512 aa11.22□□□□□ -0.61
PTPRK-205ENST00000368213 EIF3BP55884 814 aaKnown RBP11.22□□□□□ -0.61
PTPRK-205ENST00000368213 NAA25Q14CX7 972 aa11.22□□□□□ -0.61
PTPRK-205ENST00000368213 DSG4Q86SJ6 1040 aa11.22□□□□□ -0.61
PTPRK-205ENST00000368213 CACUL1Q86Y37 369 aa11.22□□□□□ -0.61
PTPRK-205ENST00000368213 ARHGEF26Q96DR7 871 aa11.22□□□□□ -0.61
PTPRK-205ENST00000368213 CAPS2Q9BXY5 557 aa11.22□□□□□ -0.61
PTPRK-205ENST00000368213 ELOVL4Q9GZR5 314 aa11.22□□□□□ -0.61
PTPRK-205ENST00000368213 ASB7Q9H672 318 aa11.22□□□□□ -0.61
PTPRK-205ENST00000368213 DDX20Q9UHI6 824 aaKnown RBP11.22□□□□□ -0.61
PTPRK-205ENST00000368213 NFU1Q9UMS0 254 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms