RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 PCDHB5Q9Y5E4 795 aa10.56□□□□□ -0.72
CD48-202ENST00000368046 VWA8A3KMH1 1905 aa10.56□□□□□ -0.72
CD48-202ENST00000368046 NCOR1O75376 2440 aa10.56□□□□□ -0.72
CD48-202ENST00000368046 PLXNA3P51805 1871 aa10.55□□□□□ -0.72
CD48-202ENST00000368046 PDCD11Q14690 1871 aaKnown RBP10.55□□□□□ -0.72
CD48-202ENST00000368046 ANHXE9PGG2 379 aa10.55□□□□□ -0.72
CD48-202ENST00000368046 VNN1O95497 513 aa10.55□□□□□ -0.72
CD48-202ENST00000368046 HAPLN1P10915 354 aaPredicted RBP10.55□□□□□ -0.72
CD48-202ENST00000368046 WARSP23381 471 aaKnown RBP10.55□□□□□ -0.72
CD48-202ENST00000368046 CCNE1P24864 410 aa10.55□□□□□ -0.72
CD48-202ENST00000368046 LMO2P25791 158 aa10.55□□□□□ -0.72
CD48-202ENST00000368046 EPHA5P54756 1037 aa10.55□□□□□ -0.72
CD48-202ENST00000368046 LRRC63Q05C16 580 aa10.55□□□□□ -0.72
CD48-202ENST00000368046 SIGLEC14Q08ET2 396 aa10.55□□□□□ -0.72
CD48-202ENST00000368046 NCOA4Q13772 614 aa10.55□□□□□ -0.72
CD48-202ENST00000368046 MGAT5BQ3V5L5 792 aa10.55□□□□□ -0.72
CD48-202ENST00000368046 ZACNQ401N2 412 aa10.55□□□□□ -0.72
CD48-202ENST00000368046 INTS6LQ5JSJ4 861 aaKnown RBP10.55□□□□□ -0.72
CD48-202ENST00000368046 PRSS36Q5K4E3 855 aa10.55□□□□□ -0.72
CD48-202ENST00000368046 C1orf220Q5T0J3 134 aa10.55□□□□□ -0.72
CD48-202ENST00000368046 TDRD10Q5VZ19 366 aaKnown RBP10.55□□□□□ -0.72
CD48-202ENST00000368046 FAM171BQ6P995 826 aa10.55□□□□□ -0.72
CD48-202ENST00000368046 PDZD4Q76G19 769 aaPredicted RBP10.55□□□□□ -0.72
CD48-202ENST00000368046 DNAJB7Q7Z6W7 309 aaPredicted RBP10.55□□□□□ -0.72
CD48-202ENST00000368046 ITIH5Q86UX2 942 aa10.55□□□□□ -0.72
CD48-202ENST00000368046 KBTBD7Q8WVZ9 684 aa10.55□□□□□ -0.72
CD48-202ENST00000368046 TAF4BQ92750 862 aa10.55□□□□□ -0.72
CD48-202ENST00000368046 PSMG2Q969U7 264 aa10.55□□□□□ -0.72
CD48-202ENST00000368046 MCRS1Q96EZ8 462 aa10.55□□□□□ -0.72
CD48-202ENST00000368046 GPR88Q9GZN0 384 aa10.55□□□□□ -0.72
CD48-202ENST00000368046 DNAJC25Q9H1X3 360 aa10.55□□□□□ -0.72
CD48-202ENST00000368046 SNX25Q9H3E2 840 aa10.55□□□□□ -0.72
CD48-202ENST00000368046 TMLHEQ9NVH6 421 aa10.55□□□□□ -0.72
CD48-202ENST00000368046 NXF1Q9UBU9 619 aaKnown RBP10.55□□□□□ -0.72
CD48-202ENST00000368046 CDH9Q9ULB4 789 aa10.55□□□□□ -0.72
CD48-202ENST00000368046 MYBPHLA2RUH7 354 aa10.54□□□□□ -0.72
CD48-202ENST00000368046 PPP1R3GB7ZBB8 358 aa10.54□□□□□ -0.72
CD48-202ENST00000368046 PSMA7O14818 248 aa10.54□□□□□ -0.72
CD48-202ENST00000368046 PDGFRBP09619 1106 aa10.54□□□□□ -0.72
CD48-202ENST00000368046 BMP6P22004 513 aa10.54□□□□□ -0.72
CD48-202ENST00000368046 ACAT1P24752 427 aaKnown RBP10.54□□□□□ -0.72
CD48-202ENST00000368046 GTF2H1P32780 548 aa10.54□□□□□ -0.72
CD48-202ENST00000368046 CCR2P41597 374 aa10.54□□□□□ -0.72
CD48-202ENST00000368046 PMS1P54277 932 aaKnown RBP10.54□□□□□ -0.72
CD48-202ENST00000368046 RPL10AP62906 217 aaKnown RBP10.54□□□□□ -0.72
CD48-202ENST00000368046 TNNC1P63316 161 aa10.54□□□□□ -0.72
CD48-202ENST00000368046 MORC3Q14149 939 aa10.54□□□□□ -0.72
CD48-202ENST00000368046 MAPRE1Q15691 268 aaKnown RBP10.54□□□□□ -0.72
CD48-202ENST00000368046 CAMK4Q16566 473 aa10.54□□□□□ -0.72
CD48-202ENST00000368046 SLC5A9Q2M3M2 681 aa10.54□□□□□ -0.72
CD48-202ENST00000368046 CFAP221Q4G0U5 840 aa10.54□□□□□ -0.72
CD48-202ENST00000368046 ZNF667Q5HYK9 610 aa10.54□□□□□ -0.72
CD48-202ENST00000368046 FILIP1Q7Z7B0 1213 aa10.54□□□□□ -0.72
CD48-202ENST00000368046 NPAS3Q8IXF0 933 aa10.54□□□□□ -0.72
CD48-202ENST00000368046 OR6B3Q8NGW1 331 aa10.54□□□□□ -0.72
CD48-202ENST00000368046 RSAD2Q8WXG1 361 aa10.54□□□□□ -0.72
CD48-202ENST00000368046 EEF2KMTQ96G04 330 aa10.54□□□□□ -0.72
CD48-202ENST00000368046 FUBP3Q96I24 572 aaKnown RBP eCLIP10.54□□□□□ -0.72
CD48-202ENST00000368046 IPO9Q96P70 1041 aaKnown RBP10.54□□□□□ -0.72
CD48-202ENST00000368046 PKMYT1Q99640 499 aa10.54□□□□□ -0.72
CD48-202ENST00000368046 SEPT5Q99719 369 aaPredicted RBP10.54□□□□□ -0.72
CD48-202ENST00000368046 MRPL45Q9BRJ2 306 aaKnown RBP10.54□□□□□ -0.72
CD48-202ENST00000368046 PI4K2AQ9BTU6 479 aa10.54□□□□□ -0.72
CD48-202ENST00000368046 LRRC3Q9BY71 257 aa10.54□□□□□ -0.72
CD48-202ENST00000368046 ABCB6Q9NP58 842 aa10.54□□□□□ -0.72
CD48-202ENST00000368046 ASAH2Q9NR71 780 aa10.54□□□□□ -0.72
CD48-202ENST00000368046 ABI2Q9NYB9 513 aaPredicted RBP10.54□□□□□ -0.72
CD48-202ENST00000368046 KIAA1468Q9P260 1216 aa10.54□□□□□ -0.72
CD48-202ENST00000368046 MAGEC2Q9UBF1 373 aaPredicted RBP10.54□□□□□ -0.72
CD48-202ENST00000368046 MTCL1Q9Y4B5 1905 aaKnown RBP10.54□□□□□ -0.72
CD48-202ENST00000368046 FAM86C2PA6NEL3 165 aa10.53□□□□□ -0.72
CD48-202ENST00000368046 TMEM221A6NGB7 291 aa10.53□□□□□ -0.72
CD48-202ENST00000368046 A8MXQ7 604 aa10.53□□□□□ -0.72
CD48-202ENST00000368046 M0R296 226 aa10.53□□□□□ -0.72
CD48-202ENST00000368046 SLC16A3O15427 465 aaKnown RBP10.53□□□□□ -0.72
CD48-202ENST00000368046 STX10O60499 249 aa10.53□□□□□ -0.72
CD48-202ENST00000368046 ATP2C2O75185 946 aa10.53□□□□□ -0.72
CD48-202ENST00000368046 MOSPD3O75425 235 aa10.53□□□□□ -0.72
CD48-202ENST00000368046 SOAT2O75908 522 aa10.53□□□□□ -0.72
CD48-202ENST00000368046 FGF19O95750 216 aa10.53□□□□□ -0.72
CD48-202ENST00000368046 EPB41P11171 864 aaKnown RBP10.53□□□□□ -0.72
CD48-202ENST00000368046 MYL4P12829 197 aa10.53□□□□□ -0.72
CD48-202ENST00000368046 P4HA1P13674 534 aa10.53□□□□□ -0.72
CD48-202ENST00000368046 PTPN1P18031 435 aaKnown RBP10.53□□□□□ -0.72
CD48-202ENST00000368046 CYP2F1P24903 491 aa10.53□□□□□ -0.72
CD48-202ENST00000368046 GCLMP48507 274 aa10.53□□□□□ -0.72
CD48-202ENST00000368046 CDR1P51861 262 aa10.53□□□□□ -0.72
CD48-202ENST00000368046 CDH8P55286 799 aa10.53□□□□□ -0.72
CD48-202ENST00000368046 PPP3CAQ08209 521 aa10.53□□□□□ -0.72
CD48-202ENST00000368046 HTR4Q13639 388 aa10.53□□□□□ -0.72
CD48-202ENST00000368046 VEPH1Q14D04 833 aa10.53□□□□□ -0.72
CD48-202ENST00000368046 TAF12Q16514 161 aa10.53□□□□□ -0.72
CD48-202ENST00000368046 ZNF699Q32M78 642 aa10.53□□□□□ -0.72
CD48-202ENST00000368046 KRT39Q6A163 491 aa10.53□□□□□ -0.72
CD48-202ENST00000368046 FOXR2Q6PJQ5 311 aa10.53□□□□□ -0.72
CD48-202ENST00000368046 PARM1Q6UWI2 310 aa10.53□□□□□ -0.72
CD48-202ENST00000368046 C4orf50Q6ZRC1 276 aa10.53□□□□□ -0.72
CD48-202ENST00000368046 MTSS1LQ765P7 747 aa10.53□□□□□ -0.72
CD48-202ENST00000368046 SPATA2LQ8IUW3 424 aaPredicted RBP10.53□□□□□ -0.72
CD48-202ENST00000368046 ZC3H3Q8IXZ2 948 aaKnown RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms