RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 IGF2BP3O00425 579 aaKnown RBP eCLIP15.04■□□□□ -0
CD48-201ENST00000368045 KRT15P19012 456 aa15.04■□□□□ -0
CD48-201ENST00000368045 SETDB1Q15047 1291 aa15.04■□□□□ -0
CD48-201ENST00000368045 HIF1AQ16665 826 aa15.04■□□□□ -0
CD48-201ENST00000368045 ZNF699Q32M78 642 aa15.04■□□□□ -0
CD48-201ENST00000368045 SPDYAQ5MJ70 313 aa15.04■□□□□ -0
CD48-201ENST00000368045 SEPT14Q6ZU15 432 aa15.04■□□□□ -0
CD48-201ENST00000368045 PPIL6Q8IXY8 311 aa15.04■□□□□ -0
CD48-201ENST00000368045 WDTC1Q8N5D0 677 aa15.04■□□□□ -0
CD48-201ENST00000368045 PRPF31Q8WWY3 499 aaKnown RBP15.04■□□□□ -0
CD48-201ENST00000368045 SEPT1Q8WYJ6 367 aa15.04■□□□□ -0
CD48-201ENST00000368045 TCHPQ9BT92 498 aa15.04■□□□□ -0
CD48-201ENST00000368045 FARP1Q9Y4F1 1045 aaPredicted RBP15.04■□□□□ -0
CD48-201ENST00000368045 USH1CQ9Y6N9 552 aa15.04■□□□□ -0
CD48-201ENST00000368045 B4GALT4O60513 344 aa15.03■□□□□ -0
CD48-201ENST00000368045 TNNC2P02585 160 aa15.03■□□□□ -0
CD48-201ENST00000368045 PRKCBP05771 671 aa15.03■□□□□ -0
CD48-201ENST00000368045 WEE2P0C1S8 567 aa15.03■□□□□ -0
CD48-201ENST00000368045 NF2P35240 595 aa15.03■□□□□ -0
CD48-201ENST00000368045 TNFSF9P41273 254 aa15.03■□□□□ -0
CD48-201ENST00000368045 YARSP54577 528 aaKnown RBP15.03■□□□□ -0
CD48-201ENST00000368045 ARL4CP56559 192 aa15.03■□□□□ -0
CD48-201ENST00000368045 GEMIN4P57678 1058 aaKnown RBP15.03■□□□□ -0
CD48-201ENST00000368045 PLCB3Q01970 1234 aa15.03■□□□□ -0
CD48-201ENST00000368045 MAPK6Q16659 721 aa15.03■□□□□ -0
CD48-201ENST00000368045 WDR72Q3MJ13 1102 aa15.03■□□□□ -0
CD48-201ENST00000368045 SEZ6Q53EL9 994 aa15.03■□□□□ -0
CD48-201ENST00000368045 ECHDC2Q86YB7 292 aa15.03■□□□□ -0
CD48-201ENST00000368045 ATP11CQ8NB49 1132 aa15.03■□□□□ -0
CD48-201ENST00000368045 GIMAP7Q8NHV1 300 aa15.03■□□□□ -0
CD48-201ENST00000368045 KLRG1Q96E93 195 aa15.03■□□□□ -0
CD48-201ENST00000368045 RMDN2Q96LZ7 410 aa15.03■□□□□ -0
CD48-201ENST00000368045 RAB3IPQ96QF0 476 aaPredicted RBP15.03■□□□□ -0
CD48-201ENST00000368045 AGTPBP1Q9UPW5 1226 aa15.03■□□□□ -0
CD48-201ENST00000368045 AFG3L2Q9Y4W6 797 aa15.03■□□□□ -0
CD48-201ENST00000368045 PPP2R3BQ9Y5P8 575 aa15.03■□□□□ -0
CD48-201ENST00000368045 SNCAIPQ9Y6H5 919 aa15.03■□□□□ -0
CD48-201ENST00000368045 POC1B-GALNT4F8VUJ3 575 aa15.03■□□□□ -0
CD48-201ENST00000368045 NFKBIEO00221 500 aa15.03■□□□□ -0
CD48-201ENST00000368045 ABLIM1O14639 778 aa15.03■□□□□ -0
CD48-201ENST00000368045 DCTN3O75935 186 aa15.03■□□□□ -0
CD48-201ENST00000368045 ZWINTO95229 277 aa15.03■□□□□ -0
CD48-201ENST00000368045 PSMA2P25787 234 aa15.03■□□□□ -0
CD48-201ENST00000368045 ASPAP45381 313 aa15.03■□□□□ -0
CD48-201ENST00000368045 KCNJ2P63252 427 aa15.03■□□□□ -0
CD48-201ENST00000368045 CNTN2Q02246 1040 aa15.03■□□□□ -0
CD48-201ENST00000368045 SLC25A11Q02978 314 aaKnown RBP15.03■□□□□ -0
CD48-201ENST00000368045 PDIA2Q13087 525 aaKnown RBP15.03■□□□□ -0
CD48-201ENST00000368045 ACAP1Q15027 740 aa15.03■□□□□ -0
CD48-201ENST00000368045 PKN2Q16513 984 aaKnown RBP15.03■□□□□ -0
CD48-201ENST00000368045 KLHL38Q2WGJ6 581 aa15.03■□□□□ -0
CD48-201ENST00000368045 METTL7BQ6UX53 244 aa15.03■□□□□ -0
CD48-201ENST00000368045 TSHZ1Q6ZSZ6 1077 aa15.03■□□□□ -0
CD48-201ENST00000368045 ZBTB33Q86T24 672 aa15.03■□□□□ -0
CD48-201ENST00000368045 ZBED8Q8IZ13 594 aa15.03■□□□□ -0
CD48-201ENST00000368045 TFAP2BQ92481 460 aa15.03■□□□□ -0
CD48-201ENST00000368045 ANKRD36BP1Q96IX9 119 aa15.03■□□□□ -0
CD48-201ENST00000368045 PDGFDQ9GZP0 370 aaPredicted RBP15.03■□□□□ -0
CD48-201ENST00000368045 XYLT2Q9H1B5 865 aa15.03■□□□□ -0
CD48-201ENST00000368045 ZMYND8Q9ULU4 1186 aaPredicted RBP15.03■□□□□ -0
CD48-201ENST00000368045 MYH9P35579 1960 aaKnown RBP15.02■□□□□ -0
CD48-201ENST00000368045 TYROBPO43914 113 aa15.02□□□□□ -0.01
CD48-201ENST00000368045 EDF1O60869 148 aaKnown RBP15.02□□□□□ -0.01
CD48-201ENST00000368045 WFS1O76024 890 aa15.02□□□□□ -0.01
CD48-201ENST00000368045 UNC5CO95185 931 aa15.02□□□□□ -0.01
CD48-201ENST00000368045 IL18RAPO95256 599 aa15.02□□□□□ -0.01
CD48-201ENST00000368045 HOXC6P09630 235 aa15.02□□□□□ -0.01
CD48-201ENST00000368045 KRT3P12035 628 aa15.02□□□□□ -0.01
CD48-201ENST00000368045 ETS1P14921 441 aa15.02□□□□□ -0.01
CD48-201ENST00000368045 PROZP22891 400 aa15.02□□□□□ -0.01
CD48-201ENST00000368045 ALDH3A1P30838 453 aa15.02□□□□□ -0.01
CD48-201ENST00000368045 LACTBP83111 547 aaPredicted RBP15.02□□□□□ -0.01
CD48-201ENST00000368045 MGAT5Q09328 741 aa15.02□□□□□ -0.01
CD48-201ENST00000368045 LAMTOR4Q0VGL1 99 aa15.02□□□□□ -0.01
CD48-201ENST00000368045 FASTKD3Q14CZ7 662 aaKnown RBP15.02□□□□□ -0.01
CD48-201ENST00000368045 TXNRD3NBQ6F5E7 133 aa15.02□□□□□ -0.01
CD48-201ENST00000368045 MPZL3Q6UWV2 235 aa15.02□□□□□ -0.01
CD48-201ENST00000368045 RIOX2Q8IUF8 465 aa15.02□□□□□ -0.01
CD48-201ENST00000368045 LRRC8CQ8TDW0 803 aa15.02□□□□□ -0.01
CD48-201ENST00000368045 PAIP2Q9BPZ3 127 aaKnown RBP15.02□□□□□ -0.01
CD48-201ENST00000368045 TMEM121Q9BTD3 319 aa15.02□□□□□ -0.01
CD48-201ENST00000368045 EBF2Q9HAK2 575 aa15.02□□□□□ -0.01
CD48-201ENST00000368045 LTBP3Q9NS15 1303 aa15.02□□□□□ -0.01
CD48-201ENST00000368045 PHTF1Q9UMS5 762 aa15.02□□□□□ -0.01
CD48-201ENST00000368045 IGKV6-21A0A0C4DH24 114 aa15.01□□□□□ -0.01
CD48-201ENST00000368045 TTLL13PA6NNM8 815 aa15.01□□□□□ -0.01
CD48-201ENST00000368045 E7ESA3 106 aa15.01□□□□□ -0.01
CD48-201ENST00000368045 SPAG7O75391 227 aa15.01□□□□□ -0.01
CD48-201ENST00000368045 IFNB1P01574 187 aa15.01□□□□□ -0.01
CD48-201ENST00000368045 CCND1P24385 295 aa15.01□□□□□ -0.01
CD48-201ENST00000368045 CTCFP49711 727 aaPredicted RBP15.01□□□□□ -0.01
CD48-201ENST00000368045 OTUD4Q01804 1114 aaKnown RBP15.01□□□□□ -0.01
CD48-201ENST00000368045 MOGSQ13724 837 aa15.01□□□□□ -0.01
CD48-201ENST00000368045 PARP6Q2NL67 630 aa15.01□□□□□ -0.01
CD48-201ENST00000368045 PTPN20Q4JDL3 420 aa15.01□□□□□ -0.01
CD48-201ENST00000368045 HHATQ5VTY9 493 aa15.01□□□□□ -0.01
CD48-201ENST00000368045 DENND1BQ6P3S1 775 aa15.01□□□□□ -0.01
CD48-201ENST00000368045 LBX2Q6XYB7 198 aa15.01□□□□□ -0.01
CD48-201ENST00000368045 NAT8LQ8N9F0 302 aa15.01□□□□□ -0.01
CD48-201ENST00000368045 ZNF398Q8TD17 642 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms