RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 ITPK1Q13572 414 aa12.31□□□□□ -0.44
CDC42BPA-202ENST00000366764 TNPO2O14787 897 aaKnown RBP12.31□□□□□ -0.44
CDC42BPA-202ENST00000366764 CYP24A1Q07973 514 aa12.31□□□□□ -0.44
CDC42BPA-202ENST00000366764 DALRD3Q5D0E6 543 aaKnown RBP12.31□□□□□ -0.44
CDC42BPA-202ENST00000366764 PPHLN1Q8NEY8 458 aaKnown RBP12.31□□□□□ -0.44
CDC42BPA-202ENST00000366764 SPIRE2Q8WWL2 714 aa12.31□□□□□ -0.44
CDC42BPA-202ENST00000366764 SH3GL2Q99962 352 aa12.31□□□□□ -0.44
CDC42BPA-202ENST00000366764 APOL6Q9BWW8 343 aa12.31□□□□□ -0.44
CDC42BPA-202ENST00000366764 FAM196BA6NMK8 535 aa12.31□□□□□ -0.44
CDC42BPA-202ENST00000366764 INPP4AQ96PE3 977 aaPredicted RBP12.31□□□□□ -0.44
CDC42BPA-202ENST00000366764 TAGLN3Q9UI15 199 aa12.31□□□□□ -0.44
CDC42BPA-202ENST00000366764 NRXN3Q9Y4C0 1643 aa12.31□□□□□ -0.44
CDC42BPA-202ENST00000366764 TIMM44O43615 452 aa12.3□□□□□ -0.44
CDC42BPA-202ENST00000366764 DDR1Q08345 913 aa12.3□□□□□ -0.44
CDC42BPA-202ENST00000366764 TSEN2Q8NCE0 465 aaKnown RBP12.3□□□□□ -0.44
CDC42BPA-202ENST00000366764 DTX3LQ8TDB6 740 aa12.3□□□□□ -0.44
CDC42BPA-202ENST00000366764 TEKT4Q8WW24 435 aa12.3□□□□□ -0.44
CDC42BPA-202ENST00000366764 CCDC126Q96EE4 140 aa12.3□□□□□ -0.44
CDC42BPA-202ENST00000366764 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.3□□□□□ -0.44
CDC42BPA-202ENST00000366764 SLCO1B7G3V0H7 640 aa12.3□□□□□ -0.44
CDC42BPA-202ENST00000366764 MAN1A2O60476 641 aa12.3□□□□□ -0.44
CDC42BPA-202ENST00000366764 ITGA4P13612 1032 aa12.3□□□□□ -0.44
CDC42BPA-202ENST00000366764 CDH2P19022 906 aaPredicted RBP12.3□□□□□ -0.44
CDC42BPA-202ENST00000366764 FECHP22830 423 aa12.3□□□□□ -0.44
CDC42BPA-202ENST00000366764 STX5Q13190 355 aa12.3□□□□□ -0.44
CDC42BPA-202ENST00000366764 TBCBQ99426 244 aa12.3□□□□□ -0.44
CDC42BPA-202ENST00000366764 ASPSCR1Q9BZE9 553 aa12.3□□□□□ -0.44
CDC42BPA-202ENST00000366764 ENO4A6NNW6 628 aa12.3□□□□□ -0.44
CDC42BPA-202ENST00000366764 SNX2O60749 519 aa12.3□□□□□ -0.44
CDC42BPA-202ENST00000366764 ZNF572Q7Z3I7 529 aaPredicted RBP12.3□□□□□ -0.44
CDC42BPA-202ENST00000366764 ARID3BQ8IVW6 561 aaPredicted RBP12.3□□□□□ -0.44
CDC42BPA-202ENST00000366764 SEPT12Q8IYM1 358 aa12.3□□□□□ -0.44
CDC42BPA-202ENST00000366764 RNF149Q8NC42 400 aa12.3□□□□□ -0.44
CDC42BPA-202ENST00000366764 STARD13Q9Y3M8 1113 aa12.3□□□□□ -0.44
CDC42BPA-202ENST00000366764 LIN7AO14910 233 aaPredicted RBP12.3□□□□□ -0.44
CDC42BPA-202ENST00000366764 NR3C2P08235 984 aa12.3□□□□□ -0.44
CDC42BPA-202ENST00000366764 GPD1P21695 349 aa12.3□□□□□ -0.44
CDC42BPA-202ENST00000366764 ASAP3Q8TDY4 903 aa12.3□□□□□ -0.44
CDC42BPA-202ENST00000366764 PAFAH2Q99487 392 aa12.3□□□□□ -0.44
CDC42BPA-202ENST00000366764 OSGEPQ9NPF4 335 aa12.3□□□□□ -0.44
CDC42BPA-202ENST00000366764 PAIP2BQ9ULR5 123 aaKnown RBP12.3□□□□□ -0.44
CDC42BPA-202ENST00000366764 CYP3A4P08684 503 aa12.3□□□□□ -0.44
CDC42BPA-202ENST00000366764 ILKAPQ9H0C8 392 aaPredicted RBP12.3□□□□□ -0.44
CDC42BPA-202ENST00000366764 GGT7Q9UJ14 662 aa12.3□□□□□ -0.44
CDC42BPA-202ENST00000366764 SDR42E2A6NKP2 422 aa12.3□□□□□ -0.44
CDC42BPA-202ENST00000366764 TSHRP16473 764 aa12.3□□□□□ -0.44
CDC42BPA-202ENST00000366764 MAP3K10Q02779 954 aa12.3□□□□□ -0.44
CDC42BPA-202ENST00000366764 EARS2Q5JPH6 523 aaKnown RBP12.3□□□□□ -0.44
CDC42BPA-202ENST00000366764 KATNAL2Q8IYT4 538 aa12.3□□□□□ -0.44
CDC42BPA-202ENST00000366764 SMARCAD1Q9H4L7 1026 aa12.3□□□□□ -0.44
CDC42BPA-202ENST00000366764 HEY2Q9UBP5 337 aa12.3□□□□□ -0.44
CDC42BPA-202ENST00000366764 CYP3A7-CYP3A51PA0A087WV96 503 aa12.3□□□□□ -0.44
CDC42BPA-202ENST00000366764 GLRA3O75311 464 aa12.3□□□□□ -0.44
CDC42BPA-202ENST00000366764 ALADP13716 330 aa12.3□□□□□ -0.44
CDC42BPA-202ENST00000366764 CYP3A7P24462 503 aa12.3□□□□□ -0.44
CDC42BPA-202ENST00000366764 NAMPTP43490 491 aa12.3□□□□□ -0.44
CDC42BPA-202ENST00000366764 TNIP2Q8NFZ5 429 aa12.3□□□□□ -0.44
CDC42BPA-202ENST00000366764 PNMA5Q96PV4 448 aa12.3□□□□□ -0.44
CDC42BPA-202ENST00000366764 TMEM51Q9NW97 253 aa12.3□□□□□ -0.44
CDC42BPA-202ENST00000366764 SLC12A3P55017 1021 aa12.3□□□□□ -0.44
CDC42BPA-202ENST00000366764 BIRC2Q13490 618 aa12.3□□□□□ -0.44
CDC42BPA-202ENST00000366764 NAB1Q13506 487 aa12.3□□□□□ -0.44
CDC42BPA-202ENST00000366764 RIPK1Q13546 671 aa12.3□□□□□ -0.44
CDC42BPA-202ENST00000366764 DPY19L2Q6NUT2 758 aa12.3□□□□□ -0.44
CDC42BPA-202ENST00000366764 LINC00116Q8NCU8 138 aa12.3□□□□□ -0.44
CDC42BPA-202ENST00000366764 PRPF31Q8WWY3 499 aaKnown RBP12.3□□□□□ -0.44
CDC42BPA-202ENST00000366764 DCLK3Q9C098 648 aa12.3□□□□□ -0.44
CDC42BPA-202ENST00000366764 ANLNQ9NQW6 1124 aa12.3□□□□□ -0.44
CDC42BPA-202ENST00000366764 WARS2Q9UGM6 360 aaKnown RBP12.3□□□□□ -0.44
CDC42BPA-202ENST00000366764 LOXHD1Q8IVV2 1947 aa12.3□□□□□ -0.44
CDC42BPA-202ENST00000366764 TPI1P60174 286 aa12.3□□□□□ -0.44
CDC42BPA-202ENST00000366764 HES6Q96HZ4 224 aa12.3□□□□□ -0.44
CDC42BPA-202ENST00000366764 RPAP3Q9H6T3 665 aaPredicted RBP12.3□□□□□ -0.44
CDC42BPA-202ENST00000366764 PRDM16Q9HAZ2 1276 aa12.3□□□□□ -0.44
CDC42BPA-202ENST00000366764 ACAP1Q15027 740 aa12.29□□□□□ -0.44
CDC42BPA-202ENST00000366764 CHI3L2Q15782 390 aa12.29□□□□□ -0.44
CDC42BPA-202ENST00000366764 THEM5Q8N1Q8 247 aa12.29□□□□□ -0.44
CDC42BPA-202ENST00000366764 FAM71DQ8N9W8 422 aa12.29□□□□□ -0.44
CDC42BPA-202ENST00000366764 NUMA1Q14980 2115 aa12.29□□□□□ -0.44
CDC42BPA-202ENST00000366764 CA8P35219 290 aa12.29□□□□□ -0.44
CDC42BPA-202ENST00000366764 MFSD5Q6N075 450 aa12.29□□□□□ -0.44
CDC42BPA-202ENST00000366764 SCFD2Q8WU76 684 aa12.29□□□□□ -0.44
CDC42BPA-202ENST00000366764 ASB14A6NK59 587 aa12.29□□□□□ -0.44
CDC42BPA-202ENST00000366764 DDX3XO00571 662 aaKnown RBP eCLIP12.29□□□□□ -0.442e-7■■■□□ 19
CDC42BPA-202ENST00000366764 E2F6O75461 281 aa12.29□□□□□ -0.44
CDC42BPA-202ENST00000366764 ACOT2P49753 483 aa12.29□□□□□ -0.44
CDC42BPA-202ENST00000366764 TSPY1Q01534 308 aa12.29□□□□□ -0.44
CDC42BPA-202ENST00000366764 FLOT2Q14254 428 aa12.29□□□□□ -0.44
CDC42BPA-202ENST00000366764 LRRC38Q5VT99 294 aa12.29□□□□□ -0.44
CDC42BPA-202ENST00000366764 TMPRSS6Q8IU80 811 aa12.29□□□□□ -0.44
CDC42BPA-202ENST00000366764 NAALADL1Q9UQQ1 740 aa12.29□□□□□ -0.44
CDC42BPA-202ENST00000366764 VPS9D1Q9Y2B5 631 aa12.29□□□□□ -0.44
CDC42BPA-202ENST00000366764 ADCY3O60266 1144 aa12.29□□□□□ -0.44
CDC42BPA-202ENST00000366764 CASP4P49662 377 aa12.29□□□□□ -0.44
CDC42BPA-202ENST00000366764 PURBQ96QR8 312 aaKnown RBP12.29□□□□□ -0.44
CDC42BPA-202ENST00000366764 CGRRF1Q99675 332 aa12.29□□□□□ -0.44
CDC42BPA-202ENST00000366764 STX18Q9P2W9 335 aaKnown RBP12.29□□□□□ -0.44
CDC42BPA-202ENST00000366764 SERPINB8P50452 374 aa12.29□□□□□ -0.44
CDC42BPA-202ENST00000366764 ZCWPW2Q504Y3 356 aa12.29□□□□□ -0.44
CDC42BPA-202ENST00000366764 ZFP1Q6P2D0 407 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms