RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 TMC5Q6UXY8 1006 aa8.94□□□□□ -0.98
YBX3-204ENST00000366290 IQCA1Q86XH1 822 aa8.94□□□□□ -0.98
YBX3-204ENST00000366290 CBARPQ8N350 705 aaPredicted RBP8.94□□□□□ -0.98
YBX3-204ENST00000366290 C7orf31Q8N865 590 aa8.94□□□□□ -0.98
YBX3-204ENST00000366290 TRPV1Q8NER1 839 aa8.94□□□□□ -0.98
YBX3-204ENST00000366290 DIS3LQ8TF46 1054 aaKnown RBP8.94□□□□□ -0.98
YBX3-204ENST00000366290 E2F7Q96AV8 911 aa8.94□□□□□ -0.98
YBX3-204ENST00000366290 IL17RAQ96F46 866 aa8.94□□□□□ -0.98
YBX3-204ENST00000366290 PAWRQ96IZ0 340 aaKnown RBP8.94□□□□□ -0.98
YBX3-204ENST00000366290 HTATIP2Q9BUP3 242 aa8.94□□□□□ -0.98
YBX3-204ENST00000366290 UCKL1Q9NWZ5 548 aa8.94□□□□□ -0.98
YBX3-204ENST00000366290 FBXO40Q9UH90 709 aa8.94□□□□□ -0.98
YBX3-204ENST00000366290 LAMA2P24043 3122 aaKnown RBP8.94□□□□□ -0.98
YBX3-204ENST00000366290 BAZ2BQ9UIF8 2168 aaKnown RBP8.93□□□□□ -0.98
YBX3-204ENST00000366290 MPIG6BO95866 241 aa8.93□□□□□ -0.98
YBX3-204ENST00000366290 COL6A1P12109 1028 aa8.93□□□□□ -0.98
YBX3-204ENST00000366290 PFKLP17858 780 aa8.93□□□□□ -0.98
YBX3-204ENST00000366290 CYP2C19P33261 490 aa8.93□□□□□ -0.98
YBX3-204ENST00000366290 PFKPQ01813 784 aa8.93□□□□□ -0.98
YBX3-204ENST00000366290 ZNF543Q08ER8 600 aa8.93□□□□□ -0.98
YBX3-204ENST00000366290 KLF1Q13351 362 aaPredicted RBP8.93□□□□□ -0.98
YBX3-204ENST00000366290 PDCD1Q15116 288 aa8.93□□□□□ -0.98
YBX3-204ENST00000366290 TTC38Q5R3I4 469 aa8.93□□□□□ -0.98
YBX3-204ENST00000366290 GPATCH4Q5T3I0 446 aaKnown RBP8.93□□□□□ -0.98
YBX3-204ENST00000366290 RASGRP2Q7LDG7 609 aa8.93□□□□□ -0.98
YBX3-204ENST00000366290 PHYKPLQ8IUZ5 450 aa8.93□□□□□ -0.98
YBX3-204ENST00000366290 CMIPQ8IY22 773 aa8.93□□□□□ -0.98
YBX3-204ENST00000366290 ENAHQ8N8S7 591 aaPredicted RBP8.93□□□□□ -0.98
YBX3-204ENST00000366290 SMARCC2Q8TAQ2 1214 aa8.93□□□□□ -0.98
YBX3-204ENST00000366290 MZB1Q8WU39 189 aa8.93□□□□□ -0.98
YBX3-204ENST00000366290 GDF15Q99988 308 aa8.93□□□□□ -0.98
YBX3-204ENST00000366290 SYT3Q9BQG1 590 aa8.93□□□□□ -0.98
YBX3-204ENST00000366290 SGPP1Q9BX95 441 aa8.93□□□□□ -0.98
YBX3-204ENST00000366290 RANBP17Q9H2T7 1088 aaKnown RBP8.93□□□□□ -0.98
YBX3-204ENST00000366290 SEMA4AQ9H3S1 761 aa8.93□□□□□ -0.98
YBX3-204ENST00000366290 RAVER2Q9HCJ3 691 aaKnown RBP8.93□□□□□ -0.98
YBX3-204ENST00000366290 PNMA2Q9UL42 364 aa8.93□□□□□ -0.98
YBX3-204ENST00000366290 FAN1Q9Y2M0 1017 aa8.93□□□□□ -0.98
YBX3-204ENST00000366290 LCTP09848 1927 aa8.93□□□□□ -0.98
YBX3-204ENST00000366290 UNC80Q8N2C7 3258 aa8.93□□□□□ -0.98
YBX3-204ENST00000366290 SEPT4O43236 478 aa8.92□□□□□ -0.98
YBX3-204ENST00000366290 SEMA7AO75326 666 aa8.92□□□□□ -0.98
YBX3-204ENST00000366290 FBXO21O94952 628 aa8.92□□□□□ -0.98
YBX3-204ENST00000366290 PRLP01236 227 aa8.92□□□□□ -0.98
YBX3-204ENST00000366290 ICAM1P05362 532 aa8.92□□□□□ -0.98
YBX3-204ENST00000366290 PGK2P07205 417 aa8.92□□□□□ -0.98
YBX3-204ENST00000366290 IGFBP6P24592 240 aaPredicted RBP8.92□□□□□ -0.98
YBX3-204ENST00000366290 NEK2P51955 445 aa8.92□□□□□ -0.98
YBX3-204ENST00000366290 EPHB3P54753 998 aa8.92□□□□□ -0.98
YBX3-204ENST00000366290 SCAND1P57086 179 aa8.92□□□□□ -0.98
YBX3-204ENST00000366290 INAVAQ3KP66 663 aa8.92□□□□□ -0.98
YBX3-204ENST00000366290 B3GNT8Q7Z7M8 397 aa8.92□□□□□ -0.98
YBX3-204ENST00000366290 IGDCC3Q8IVU1 814 aa8.92□□□□□ -0.98
YBX3-204ENST00000366290 CPXCR1Q8N123 301 aa8.92□□□□□ -0.98
YBX3-204ENST00000366290 FAM133AQ8N9E0 248 aa8.92□□□□□ -0.98
YBX3-204ENST00000366290 FBXO15Q8NCQ5 510 aaPredicted RBP8.92□□□□□ -0.98
YBX3-204ENST00000366290 NCOA7Q8NI08 942 aa8.92□□□□□ -0.98
YBX3-204ENST00000366290 IGDCC4Q8TDY8 1250 aa8.92□□□□□ -0.98
YBX3-204ENST00000366290 MAF1Q9H063 256 aa8.92□□□□□ -0.98
YBX3-204ENST00000366290 POFUT1Q9H488 388 aa8.92□□□□□ -0.98
YBX3-204ENST00000366290 ACAD9Q9H845 621 aa8.92□□□□□ -0.98
YBX3-204ENST00000366290 DDX20Q9UHI6 824 aaKnown RBP8.92□□□□□ -0.98
YBX3-204ENST00000366290 NR2E3Q9Y5X4 410 aa8.92□□□□□ -0.98
YBX3-204ENST00000366290 MYH6P13533 1939 aa8.92□□□□□ -0.98
YBX3-204ENST00000366290 PFASO15067 1338 aa8.91□□□□□ -0.98
YBX3-204ENST00000366290 TNKSO95271 1327 aa8.91□□□□□ -0.98
YBX3-204ENST00000366290 WDR19Q8NEZ3 1342 aa8.91□□□□□ -0.98
YBX3-204ENST00000366290 A0A1W2PPC1 479 aa8.91□□□□□ -0.98
YBX3-204ENST00000366290 GOLGA8AA7E2F4 631 aa8.91□□□□□ -0.98
YBX3-204ENST00000366290 GOLGA8BA8MQT2 603 aa8.91□□□□□ -0.98
YBX3-204ENST00000366290 CPA1P15085 419 aa8.91□□□□□ -0.98
YBX3-204ENST00000366290 ALDH6A1Q02252 535 aaKnown RBP8.91□□□□□ -0.98
YBX3-204ENST00000366290 SKIDA1Q1XH10 827 aa8.91□□□□□ -0.98
YBX3-204ENST00000366290 CCDC96Q2M329 555 aa8.91□□□□□ -0.98
YBX3-204ENST00000366290 ESPNLQ6ZVH7 1005 aa8.91□□□□□ -0.98
YBX3-204ENST00000366290 CHST3Q7LGC8 479 aa8.91□□□□□ -0.98
YBX3-204ENST00000366290 DTX3Q8N9I9 347 aa8.91□□□□□ -0.98
YBX3-204ENST00000366290 LMBR1Q8WVP7 490 aa8.91□□□□□ -0.98
YBX3-204ENST00000366290 NEK1Q96PY6 1258 aa8.91□□□□□ -0.98
YBX3-204ENST00000366290 TUBGCP5Q96RT8 1024 aa8.91□□□□□ -0.98
YBX3-204ENST00000366290 FOXB1Q99853 325 aa8.91□□□□□ -0.98
YBX3-204ENST00000366290 AMNQ9BXJ7 453 aa8.91□□□□□ -0.98
YBX3-204ENST00000366290 GCM1Q9NP62 436 aa8.91□□□□□ -0.98
YBX3-204ENST00000366290 SPEF1Q9Y4P9 236 aa8.91□□□□□ -0.98
YBX3-204ENST00000366290 CTDP1Q9Y5B0 961 aaPredicted RBP8.91□□□□□ -0.98
YBX3-204ENST00000366290 CUL9Q8IWT3 2517 aa8.91□□□□□ -0.98
YBX3-204ENST00000366290 VCANP13611 3396 aa8.9□□□□□ -0.98
YBX3-204ENST00000366290 LOC102724159A0A0B4J2E5 919 aa8.9□□□□□ -0.98
YBX3-204ENST00000366290 DNM1LO00429 736 aa8.9□□□□□ -0.98
YBX3-204ENST00000366290 NFIBO00712 420 aa8.9□□□□□ -0.98
YBX3-204ENST00000366290 N4BP3O15049 544 aa8.9□□□□□ -0.98
YBX3-204ENST00000366290 SNAI1O95863 264 aaPredicted RBP8.9□□□□□ -0.98
YBX3-204ENST00000366290 MT-CO1P00395 513 aa8.9□□□□□ -0.98
YBX3-204ENST00000366290 MYBL2P10244 700 aa8.9□□□□□ -0.98
YBX3-204ENST00000366290 SLC16A2P36021 539 aa8.9□□□□□ -0.98
YBX3-204ENST00000366290 EPHB1P54762 984 aa8.9□□□□□ -0.98
YBX3-204ENST00000366290 SLC6A3Q01959 620 aa8.9□□□□□ -0.98
YBX3-204ENST00000366290 MCL1Q07820 350 aa8.9□□□□□ -0.98
YBX3-204ENST00000366290 TRDNQ13061 729 aa8.9□□□□□ -0.98
YBX3-204ENST00000366290 IKQ13123 557 aaPredicted RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms