RNA–Protein interactions for RNA: ENST00000361655.6

PCDH11X-202, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-202ENST00000361655 REM2Q8IYK8 340 aaPredicted RBP5.79□□□□□ -1.48
PCDH11X-202ENST00000361655 RYBPQ8N488 228 aaPredicted RBP5.79□□□□□ -1.48
PCDH11X-202ENST00000361655 ZNF516Q92618 1163 aa5.79□□□□□ -1.48
PCDH11X-202ENST00000361655 SPON2Q9BUD6 331 aa5.79□□□□□ -1.48
PCDH11X-202ENST00000361655 FZD8Q9H461 694 aa5.79□□□□□ -1.48
PCDH11X-202ENST00000361655 ABCB6Q9NP58 842 aa5.79□□□□□ -1.48
PCDH11X-202ENST00000361655 CPSF3Q9UKF6 684 aaKnown RBP5.79□□□□□ -1.48
PCDH11X-202ENST00000361655 GOLGA4Q13439 2230 aaKnown RBP5.79□□□□□ -1.48
PCDH11X-202ENST00000361655 CCDC66A2RUB6 948 aa5.79□□□□□ -1.48
PCDH11X-202ENST00000361655 CCDC85CA6NKD9 419 aa5.79□□□□□ -1.48
PCDH11X-202ENST00000361655 TJP3O95049 919 aa5.79□□□□□ -1.48
PCDH11X-202ENST00000361655 ASS1P00966 412 aaKnown RBP5.79□□□□□ -1.48
PCDH11X-202ENST00000361655 TUBBP07437 444 aa5.79□□□□□ -1.48
PCDH11X-202ENST00000361655 MYBL1P10243 752 aa5.79□□□□□ -1.48
PCDH11X-202ENST00000361655 ATP2A2P16615 1042 aaKnown RBP5.79□□□□□ -1.48
PCDH11X-202ENST00000361655 SLCO1A2P46721 670 aa5.79□□□□□ -1.48
PCDH11X-202ENST00000361655 CDK17Q00537 523 aa5.79□□□□□ -1.48
PCDH11X-202ENST00000361655 IKBKEQ14164 716 aa5.79□□□□□ -1.48
PCDH11X-202ENST00000361655 FBXO38Q6PIJ6 1188 aa5.79□□□□□ -1.48
PCDH11X-202ENST00000361655 DDX42Q86XP3 938 aaKnown RBP eCLIP5.79□□□□□ -1.48
PCDH11X-202ENST00000361655 LNX1Q8TBB1 728 aaPredicted RBP5.79□□□□□ -1.48
PCDH11X-202ENST00000361655 GPR152Q8TDT2 470 aa5.79□□□□□ -1.48
PCDH11X-202ENST00000361655 LRRC45Q96CN5 670 aa5.79□□□□□ -1.48
PCDH11X-202ENST00000361655 LPIN3Q9BQK8 851 aa5.79□□□□□ -1.48
PCDH11X-202ENST00000361655 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.79□□□□□ -1.48
PCDH11X-202ENST00000361655 IQCGQ9H095 443 aaKnown RBP5.79□□□□□ -1.48
PCDH11X-202ENST00000361655 ST6GALNAC4Q9H4F1 302 aa5.79□□□□□ -1.48
PCDH11X-202ENST00000361655 RBM12Q9NTZ6 932 aaKnown RBP5.79□□□□□ -1.48
PCDH11X-202ENST00000361655 GTF2IRD1Q9UHL9 959 aa5.79□□□□□ -1.48
PCDH11X-202ENST00000361655 CNTNAP2Q9UHC6 1331 aa5.78□□□□□ -1.48
PCDH11X-202ENST00000361655 TNS1Q9HBL0 1735 aaKnown RBP5.78□□□□□ -1.48
PCDH11X-202ENST00000361655 E5RJQ4 531 aa5.78□□□□□ -1.48
PCDH11X-202ENST00000361655 POC1B-GALNT4F8VUJ3 575 aa5.78□□□□□ -1.48
PCDH11X-202ENST00000361655 M0QYT0 321 aa5.78□□□□□ -1.48
PCDH11X-202ENST00000361655 OPA1O60313 960 aa5.78□□□□□ -1.48
PCDH11X-202ENST00000361655 MICAL2O94851 1124 aa5.78□□□□□ -1.48
PCDH11X-202ENST00000361655 C4BPAP04003 597 aaKnown RBP5.78□□□□□ -1.48
PCDH11X-202ENST00000361655 KRT7P08729 469 aa5.78□□□□□ -1.48
PCDH11X-202ENST00000361655 OR4Q2P0C623 313 aa5.78□□□□□ -1.48
PCDH11X-202ENST00000361655 CCL5P13501 91 aa5.78□□□□□ -1.48
PCDH11X-202ENST00000361655 SAT1P21673 171 aa5.78□□□□□ -1.48
PCDH11X-202ENST00000361655 GRM5P41594 1212 aa5.78□□□□□ -1.48
PCDH11X-202ENST00000361655 LBX1P52954 281 aa5.78□□□□□ -1.48
PCDH11X-202ENST00000361655 YWHAGP61981 247 aaKnown RBP eCLIP5.78□□□□□ -1.48
PCDH11X-202ENST00000361655 DEUP1Q05D60 604 aa5.78□□□□□ -1.48
PCDH11X-202ENST00000361655 DHX9Q08211 1270 aaKnown RBP5.78□□□□□ -1.48
PCDH11X-202ENST00000361655 SKIV2LQ15477 1246 aaKnown RBP5.78□□□□□ -1.48
PCDH11X-202ENST00000361655 TARBP2Q15633 366 aaKnown RBP5.78□□□□□ -1.48
PCDH11X-202ENST00000361655 MEA1Q16626 185 aa5.78□□□□□ -1.48
PCDH11X-202ENST00000361655 CLEC16AQ2KHT3 1053 aa5.78□□□□□ -1.48
PCDH11X-202ENST00000361655 BBS9Q3SYG4 887 aa5.78□□□□□ -1.48
PCDH11X-202ENST00000361655 SLC39A12Q504Y0 691 aa5.78□□□□□ -1.48
PCDH11X-202ENST00000361655 MORN1Q5T089 497 aa5.78□□□□□ -1.48
PCDH11X-202ENST00000361655 CCDC137Q6PK04 289 aaKnown RBP5.78□□□□□ -1.48
PCDH11X-202ENST00000361655 MAMDC4Q6UXC1 1216 aa5.78□□□□□ -1.48
PCDH11X-202ENST00000361655 PDZD4Q76G19 769 aaPredicted RBP5.78□□□□□ -1.48
PCDH11X-202ENST00000361655 TAS1R3Q7RTX0 852 aa5.78□□□□□ -1.48
PCDH11X-202ENST00000361655 DNAAF3Q8N9W5 541 aa5.78□□□□□ -1.48
PCDH11X-202ENST00000361655 GRK7Q8WTQ7 553 aa5.78□□□□□ -1.48
PCDH11X-202ENST00000361655 ATG4AQ8WYN0 398 aa5.78□□□□□ -1.48
PCDH11X-202ENST00000361655 RIN2Q8WYP3 895 aaPredicted RBP5.78□□□□□ -1.48
PCDH11X-202ENST00000361655 SHC3Q92529 594 aa5.78□□□□□ -1.48
PCDH11X-202ENST00000361655 P3H4Q92791 437 aa5.78□□□□□ -1.48
PCDH11X-202ENST00000361655 PAWRQ96IZ0 340 aaKnown RBP5.78□□□□□ -1.48
PCDH11X-202ENST00000361655 RBM41Q96IZ5 413 aaKnown RBP5.78□□□□□ -1.48
PCDH11X-202ENST00000361655 MRPL45Q9BRJ2 306 aaKnown RBP5.78□□□□□ -1.48
PCDH11X-202ENST00000361655 TRIM51Q9BSJ1 452 aa5.78□□□□□ -1.48
PCDH11X-202ENST00000361655 WNT8AQ9H1J5 351 aa5.78□□□□□ -1.48
PCDH11X-202ENST00000361655 IFT122Q9HBG6 1241 aa5.78□□□□□ -1.48
PCDH11X-202ENST00000361655 DDIT4Q9NX09 232 aa5.78□□□□□ -1.48
PCDH11X-202ENST00000361655 ANAPC5Q9UJX4 755 aa5.78□□□□□ -1.48
PCDH11X-202ENST00000361655 COL1A2P08123 1366 aa5.78□□□□□ -1.48
PCDH11X-202ENST00000361655 ZMYM2Q9UBW7 1377 aa5.78□□□□□ -1.48
PCDH11X-202ENST00000361655 A0A1B0GUA9 196 aa5.78□□□□□ -1.48
PCDH11X-202ENST00000361655 GRID2IPA4D2P6 1211 aa5.78□□□□□ -1.48
PCDH11X-202ENST00000361655 PPEF2O14830 753 aa5.78□□□□□ -1.48
PCDH11X-202ENST00000361655 SART1O43290 800 aaKnown RBP5.78□□□□□ -1.48
PCDH11X-202ENST00000361655 CAPN15O75808 1086 aa5.78□□□□□ -1.48
PCDH11X-202ENST00000361655 SYN1P17600 705 aa5.78□□□□□ -1.48
PCDH11X-202ENST00000361655 KRT15P19012 456 aa5.78□□□□□ -1.48
PCDH11X-202ENST00000361655 ATICP31939 592 aa5.78□□□□□ -1.48
PCDH11X-202ENST00000361655 GTF2F1P35269 517 aaKnown RBP eCLIP5.78□□□□□ -1.48
PCDH11X-202ENST00000361655 CLCN6P51797 869 aa5.78□□□□□ -1.48
PCDH11X-202ENST00000361655 TKTL1P51854 596 aa5.78□□□□□ -1.48
PCDH11X-202ENST00000361655 ADIGQ0VDE8 80 aa5.78□□□□□ -1.48
PCDH11X-202ENST00000361655 VEPH1Q14D04 833 aa5.78□□□□□ -1.48
PCDH11X-202ENST00000361655 LRRC8DQ7L1W4 858 aa5.78□□□□□ -1.48
PCDH11X-202ENST00000361655 ZNF677Q86XU0 584 aa5.78□□□□□ -1.48
PCDH11X-202ENST00000361655 C12orf56Q8IXR9 622 aa5.78□□□□□ -1.48
PCDH11X-202ENST00000361655 DCP1BQ8IZD4 617 aaKnown RBP5.78□□□□□ -1.48
PCDH11X-202ENST00000361655 MCOLN2Q8IZK6 566 aa5.78□□□□□ -1.48
PCDH11X-202ENST00000361655 PPP1R14CQ8TAE6 165 aa5.78□□□□□ -1.48
PCDH11X-202ENST00000361655 RXFP2Q8WXD0 754 aa5.78□□□□□ -1.48
PCDH11X-202ENST00000361655 CYP3A43Q9HB55 503 aa5.78□□□□□ -1.48
PCDH11X-202ENST00000361655 APOBEC3GQ9HC16 384 aaKnown RBP5.78□□□□□ -1.48
PCDH11X-202ENST00000361655 PCDH10Q9P2E7 1040 aa5.78□□□□□ -1.48
PCDH11X-202ENST00000361655 TTI1O43156 1089 aa5.78□□□□□ -1.48
PCDH11X-202ENST00000361655 CST8O60676 142 aa5.78□□□□□ -1.48
PCDH11X-202ENST00000361655 RALAP11233 206 aa5.78□□□□□ -1.48
PCDH11X-202ENST00000361655 GPD1P21695 349 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms