RNA–Protein interactions for RNA: ENST00000361308.8

LMNA-202, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 1,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-202ENST00000361308 TAF3Q5VWG9 929 aa18.04■□□□□ 0.48
LMNA-202ENST00000361308 VPS36Q86VN1 386 aa18.04■□□□□ 0.48
LMNA-202ENST00000361308 ZNF677Q86XU0 584 aa18.04■□□□□ 0.48
LMNA-202ENST00000361308 DCP1BQ8IZD4 617 aaKnown RBP18.04■□□□□ 0.48
LMNA-202ENST00000361308 TFAP2BQ92481 460 aa18.04■□□□□ 0.48
LMNA-202ENST00000361308 CYFIP2Q96F07 1278 aa18.04■□□□□ 0.48
LMNA-202ENST00000361308 CCDC42Q96M95 316 aa18.04■□□□□ 0.48
LMNA-202ENST00000361308 AGPAT1Q99943 283 aa18.04■□□□□ 0.48
LMNA-202ENST00000361308 LPIN3Q9BQK8 851 aa18.04■□□□□ 0.48
LMNA-202ENST00000361308 ZBP1Q9H171 429 aa18.04■□□□□ 0.48
LMNA-202ENST00000361308 PDCL3Q9H2J4 239 aa18.04■□□□□ 0.48
LMNA-202ENST00000361308 DEF6Q9H4E7 631 aa18.04■□□□□ 0.48
LMNA-202ENST00000361308 CRTAC1Q9NQ79 661 aa18.04■□□□□ 0.48
LMNA-202ENST00000361308 FAM49BQ9NUQ9 324 aa18.04■□□□□ 0.48
LMNA-202ENST00000361308 NOCTQ9UK39 431 aaKnown RBP18.04■□□□□ 0.48
LMNA-202ENST00000361308 COLQQ9Y215 455 aaPredicted RBP18.04■□□□□ 0.48
LMNA-202ENST00000361308 BACE2Q9Y5Z0 518 aa18.04■□□□□ 0.48
LMNA-202ENST00000361308 H3BNC9 293 aa18.03■□□□□ 0.48
LMNA-202ENST00000361308 TBC1D4O60343 1298 aa18.03■□□□□ 0.48
LMNA-202ENST00000361308 TNFAIP3P21580 790 aa18.03■□□□□ 0.48
LMNA-202ENST00000361308 CA8P35219 290 aa18.03■□□□□ 0.48
LMNA-202ENST00000361308 CDR2Q01850 454 aa18.03■□□□□ 0.48
LMNA-202ENST00000361308 GPM6BQ13491 265 aa18.03■□□□□ 0.48
LMNA-202ENST00000361308 MDH1BQ5I0G3 518 aa18.03■□□□□ 0.48
LMNA-202ENST00000361308 FAM171BQ6P995 826 aa18.03■□□□□ 0.48
LMNA-202ENST00000361308 ZNF571Q7Z3V5 609 aaPredicted RBP18.03■□□□□ 0.48
LMNA-202ENST00000361308 LRRTM3Q86VH5 581 aa18.03■□□□□ 0.48
LMNA-202ENST00000361308 GPR65Q8IYL9 337 aa18.03■□□□□ 0.48
LMNA-202ENST00000361308 CCDC112Q8NEF3 446 aa18.03■□□□□ 0.48
LMNA-202ENST00000361308 MYCBPAPQ8TBZ2 947 aa18.03■□□□□ 0.48
LMNA-202ENST00000361308 MICAL1Q8TDZ2 1067 aa18.03■□□□□ 0.48
LMNA-202ENST00000361308 SLC20A1Q8WUM9 679 aa18.03■□□□□ 0.48
LMNA-202ENST00000361308 ARNTL2Q8WYA1 636 aa18.03■□□□□ 0.48
LMNA-202ENST00000361308 DDX1Q92499 740 aaKnown RBP18.03■□□□□ 0.48
LMNA-202ENST00000361308 TMEM209Q96SK2 561 aa18.03■□□□□ 0.48
LMNA-202ENST00000361308 TCF25Q9BQ70 676 aa18.03■□□□□ 0.48
LMNA-202ENST00000361308 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.03■□□□□ 0.48
LMNA-202ENST00000361308 ZCWPW1Q9H0M4 648 aa18.03■□□□□ 0.48
LMNA-202ENST00000361308 NHEJ1Q9H9Q4 299 aaPredicted RBP18.03■□□□□ 0.48
LMNA-202ENST00000361308 MTRRQ9UBK8 725 aa18.03■□□□□ 0.48
LMNA-202ENST00000361308 CDY1Q9Y6F8 540 aa18.03■□□□□ 0.48
LMNA-202ENST00000361308 GBF1Q92538 1859 aa18.03■□□□□ 0.48
LMNA-202ENST00000361308 SSU72P8A0A1W2PR75 194 aa18.03■□□□□ 0.48
LMNA-202ENST00000361308 CXCL14O95715 111 aa18.03■□□□□ 0.48
LMNA-202ENST00000361308 OR4Q2P0C623 313 aa18.03■□□□□ 0.48
LMNA-202ENST00000361308 FECHP22830 423 aa18.03■□□□□ 0.48
LMNA-202ENST00000361308 EIF4A3P38919 411 aaKnown RBP18.03■□□□□ 0.48
LMNA-202ENST00000361308 ARPP19P56211 112 aa18.03■□□□□ 0.48
LMNA-202ENST00000361308 STILQ15468 1287 aa18.03■□□□□ 0.48
LMNA-202ENST00000361308 CNGA2Q16280 664 aa18.03■□□□□ 0.48
LMNA-202ENST00000361308 LRIT3Q3SXY7 679 aa18.03■□□□□ 0.48
LMNA-202ENST00000361308 PPP1R26Q5T8A7 1209 aaPredicted RBP18.03■□□□□ 0.48
LMNA-202ENST00000361308 AUTS2Q8WXX7 1259 aa18.03■□□□□ 0.48
LMNA-202ENST00000361308 ZSWIM1Q9BR11 485 aa18.03■□□□□ 0.48
LMNA-202ENST00000361308 ENTPD7Q9NQZ7 604 aa18.03■□□□□ 0.48
LMNA-202ENST00000361308 TLR9Q9NR96 1032 aa18.03■□□□□ 0.48
LMNA-202ENST00000361308 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.03■□□□□ 0.484e-6■□□□□ 8.2
LMNA-202ENST00000361308 SEPT11Q9NVA2 429 aaKnown RBP18.03■□□□□ 0.48
LMNA-202ENST00000361308 ADAMTS1Q9UHI8 967 aa18.03■□□□□ 0.48
LMNA-202ENST00000361308 VWA8A3KMH1 1905 aa18.02■□□□□ 0.48
LMNA-202ENST00000361308 GRM6O15303 877 aa18.02■□□□□ 0.48
LMNA-202ENST00000361308 MMEP08473 750 aa18.02■□□□□ 0.48
LMNA-202ENST00000361308 CPB1P15086 417 aa18.02■□□□□ 0.48
LMNA-202ENST00000361308 RPL17P18621 184 aaKnown RBP18.02■□□□□ 0.48
LMNA-202ENST00000361308 ERVFC1P60507 584 aa18.02■□□□□ 0.48
LMNA-202ENST00000361308 CYP27A1Q02318 531 aa18.02■□□□□ 0.48
LMNA-202ENST00000361308 CREMQ03060 361 aa18.02■□□□□ 0.48
LMNA-202ENST00000361308 MAPK8IP2Q13387 824 aaPredicted RBP18.02■□□□□ 0.48
LMNA-202ENST00000361308 SLC39A12Q504Y0 691 aa18.02■□□□□ 0.48
LMNA-202ENST00000361308 ARHGAP17Q68EM7 881 aa18.02■□□□□ 0.48
LMNA-202ENST00000361308 SLC8B1Q6J4K2 584 aa18.02■□□□□ 0.48
LMNA-202ENST00000361308 RSPO2Q6UXX9 243 aaPredicted RBP18.02■□□□□ 0.48
LMNA-202ENST00000361308 TMEM139Q8IV31 216 aa18.02■□□□□ 0.48
LMNA-202ENST00000361308 SLC2A14Q8TDB8 520 aa18.02■□□□□ 0.48
LMNA-202ENST00000361308 PCED1BQ96HM7 432 aa18.02■□□□□ 0.48
LMNA-202ENST00000361308 NLRC5Q86WI3 1866 aa18.01■□□□□ 0.47
LMNA-202ENST00000361308 O00370 1275 aa18.01■□□□□ 0.47
LMNA-202ENST00000361308 AKR1B10O60218 316 aa18.01■□□□□ 0.47
LMNA-202ENST00000361308 CCDC130P13994 396 aa18.01■□□□□ 0.47
LMNA-202ENST00000361308 DNAJB1P25685 340 aa18.01■□□□□ 0.47
LMNA-202ENST00000361308 SSTR3P32745 418 aaPredicted RBP18.01■□□□□ 0.47
LMNA-202ENST00000361308 OR1D2P34982 312 aa18.01■□□□□ 0.47
LMNA-202ENST00000361308 CDR1P51861 262 aa18.01■□□□□ 0.47
LMNA-202ENST00000361308 PTPN14Q15678 1187 aa18.01■□□□□ 0.47
LMNA-202ENST00000361308 NFE2Q16621 373 aaPredicted RBP18.01■□□□□ 0.47
LMNA-202ENST00000361308 LCLAT1Q6UWP7 414 aa18.01■□□□□ 0.47
LMNA-202ENST00000361308 GLYCTKQ8IVS8 523 aa18.01■□□□□ 0.47
LMNA-202ENST00000361308 ZNF830Q96NB3 372 aaPredicted RBP18.01■□□□□ 0.47
LMNA-202ENST00000361308 PKMYT1Q99640 499 aa18.01■□□□□ 0.47
LMNA-202ENST00000361308 HNRNPABQ99729 332 aaKnown RBP18.01■□□□□ 0.47
LMNA-202ENST00000361308 CLSTN3Q9BQT9 956 aa18.01■□□□□ 0.47
LMNA-202ENST00000361308 MED10Q9BTT4 135 aa18.01■□□□□ 0.47
LMNA-202ENST00000361308 NGRNQ9NPE2 291 aaKnown RBP18.01■□□□□ 0.47
LMNA-202ENST00000361308 HESX1Q9UBX0 185 aa18.01■□□□□ 0.47
LMNA-202ENST00000361308 TSPAN16Q9UKR8 245 aa18.01■□□□□ 0.47
LMNA-202ENST00000361308 PCDHGC3Q9UN70 934 aa18.01■□□□□ 0.47
LMNA-202ENST00000361308 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.01■□□□□ 0.47
LMNA-202ENST00000361308 LAMA3Q16787 3333 aa18.01■□□□□ 0.47
LMNA-202ENST00000361308 TSC2P49815 1807 aa18.01■□□□□ 0.47
LMNA-202ENST00000361308 SOWAHDA6NJG2 315 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms