RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 ALDH1A3P47895 512 aa6.53□□□□□ -1.36
CDC42SE2-201ENST00000360515 CSRP3P50461 194 aa6.53□□□□□ -1.36
CDC42SE2-201ENST00000360515 TUBP50607 506 aa6.53□□□□□ -1.36
CDC42SE2-201ENST00000360515 CYP4A11Q02928 519 aa6.53□□□□□ -1.36
CDC42SE2-201ENST00000360515 E2F5Q15329 346 aa6.53□□□□□ -1.36
CDC42SE2-201ENST00000360515 HYIQ5T013 277 aa6.53□□□□□ -1.36
CDC42SE2-201ENST00000360515 TAS1R3Q7RTX0 852 aa6.53□□□□□ -1.36
CDC42SE2-201ENST00000360515 CMTR1Q8N1G2 835 aaKnown RBP6.53□□□□□ -1.36
CDC42SE2-201ENST00000360515 RPLP0P6Q8NHW5 317 aa6.53□□□□□ -1.36
CDC42SE2-201ENST00000360515 HIC2Q96JB3 615 aa6.53□□□□□ -1.36
CDC42SE2-201ENST00000360515 EIF2AK1Q9BQI3 630 aaKnown RBP6.53□□□□□ -1.36
CDC42SE2-201ENST00000360515 CDT1Q9H211 546 aa6.53□□□□□ -1.36
CDC42SE2-201ENST00000360515 TDP1Q9NUW8 608 aa6.53□□□□□ -1.36
CDC42SE2-201ENST00000360515 SAMM50Q9Y512 469 aa6.53□□□□□ -1.36
CDC42SE2-201ENST00000360515 STYXL1Q9Y6J8 313 aa6.53□□□□□ -1.36
CDC42SE2-201ENST00000360515 TTLL13PA6NNM8 815 aa6.52□□□□□ -1.37
CDC42SE2-201ENST00000360515 DEXIO95424 95 aa6.52□□□□□ -1.37
CDC42SE2-201ENST00000360515 PRKCBP05771 671 aa6.52□□□□□ -1.37
CDC42SE2-201ENST00000360515 IGFBP6P24592 240 aaPredicted RBP6.52□□□□□ -1.37
CDC42SE2-201ENST00000360515 SIM1P81133 766 aaPredicted RBP6.52□□□□□ -1.37
CDC42SE2-201ENST00000360515 CREB5Q02930 508 aa6.52□□□□□ -1.37
CDC42SE2-201ENST00000360515 CTXN3Q4LDR2 81 aa6.52□□□□□ -1.37
CDC42SE2-201ENST00000360515 TRIM61Q5EBN2 209 aa6.52□□□□□ -1.37
CDC42SE2-201ENST00000360515 NEK8Q86SG6 692 aa6.52□□□□□ -1.37
CDC42SE2-201ENST00000360515 TSTD1Q8NFU3 115 aa6.52□□□□□ -1.37
CDC42SE2-201ENST00000360515 FAM131CQ96AQ9 280 aa6.52□□□□□ -1.37
CDC42SE2-201ENST00000360515 NXPE2Q96DL1 559 aa6.52□□□□□ -1.37
CDC42SE2-201ENST00000360515 TRIM6Q9C030 488 aaPredicted RBP6.52□□□□□ -1.37
CDC42SE2-201ENST00000360515 FBRSL1Q9HCM7 1045 aaKnown RBP6.52□□□□□ -1.37
CDC42SE2-201ENST00000360515 TNFSF14O43557 240 aa6.52□□□□□ -1.37
CDC42SE2-201ENST00000360515 ADAM23O75077 832 aa6.52□□□□□ -1.37
CDC42SE2-201ENST00000360515 LARGE1O95461 756 aa6.52□□□□□ -1.37
CDC42SE2-201ENST00000360515 SPINK2P20155 84 aa6.52□□□□□ -1.37
CDC42SE2-201ENST00000360515 GPR158Q5T848 1215 aa6.52□□□□□ -1.37
CDC42SE2-201ENST00000360515 NFXL1Q6ZNB6 911 aa6.52□□□□□ -1.37
CDC42SE2-201ENST00000360515 CHCHD4Q8N4Q1 142 aa6.52□□□□□ -1.37
CDC42SE2-201ENST00000360515 BSNDQ8WZ55 320 aa6.52□□□□□ -1.37
CDC42SE2-201ENST00000360515 FUBP3Q96I24 572 aaKnown RBP eCLIP6.52□□□□□ -1.378e-7■□□□□ 9.2
CDC42SE2-201ENST00000360515 DYDC2Q96IM9 177 aa6.52□□□□□ -1.37
CDC42SE2-201ENST00000360515 IRX2Q9BZI1 471 aaPredicted RBP6.52□□□□□ -1.37
CDC42SE2-201ENST00000360515 RAXQ9Y2V3 346 aa6.52□□□□□ -1.37
CDC42SE2-201ENST00000360515 YKT6O15498 198 aa6.52□□□□□ -1.37
CDC42SE2-201ENST00000360515 B3GAT3O94766 335 aa6.52□□□□□ -1.37
CDC42SE2-201ENST00000360515 BNC1Q01954 994 aa6.52□□□□□ -1.37
CDC42SE2-201ENST00000360515 ATF7IP2Q5U623 682 aa6.52□□□□□ -1.37
CDC42SE2-201ENST00000360515 RNF20Q5VTR2 975 aa6.52□□□□□ -1.37
CDC42SE2-201ENST00000360515 SPATA1Q5VX52 437 aa6.52□□□□□ -1.37
CDC42SE2-201ENST00000360515 LARP1BQ659C4 914 aaKnown RBP6.52□□□□□ -1.37
CDC42SE2-201ENST00000360515 HDDC3Q8N4P3 179 aa6.52□□□□□ -1.37
CDC42SE2-201ENST00000360515 MINDY1Q8N5J2 469 aa6.52□□□□□ -1.37
CDC42SE2-201ENST00000360515 IL17RCQ8NAC3 791 aa6.52□□□□□ -1.37
CDC42SE2-201ENST00000360515 FOXJ1Q92949 421 aa6.52□□□□□ -1.37
CDC42SE2-201ENST00000360515 GRAMD1AQ96CP6 724 aa6.52□□□□□ -1.37
CDC42SE2-201ENST00000360515 LNPKQ9C0E8 428 aa6.52□□□□□ -1.37
CDC42SE2-201ENST00000360515 GKN1Q9NS71 199 aa6.52□□□□□ -1.37
CDC42SE2-201ENST00000360515 KCND2Q9NZV8 630 aa6.52□□□□□ -1.37
CDC42SE2-201ENST00000360515 ZBTB47Q9UFB7 747 aaPredicted RBP6.52□□□□□ -1.37
CDC42SE2-201ENST00000360515 HCN2Q9UL51 889 aa6.52□□□□□ -1.37
CDC42SE2-201ENST00000360515 SCN8AQ9UQD0 1980 aa6.52□□□□□ -1.37
CDC42SE2-201ENST00000360515 SPAARA0A1B0GVQ0 90 aa6.51□□□□□ -1.37
CDC42SE2-201ENST00000360515 A0A1W2PRU2 124 aa6.51□□□□□ -1.37
CDC42SE2-201ENST00000360515 FAM92AA1XBS5 289 aa6.51□□□□□ -1.37
CDC42SE2-201ENST00000360515 NFATC1O95644 943 aa6.51□□□□□ -1.37
CDC42SE2-201ENST00000360515 USP17L7P0C7H9 530 aa6.51□□□□□ -1.37
CDC42SE2-201ENST00000360515 RPA1P27694 616 aa6.51□□□□□ -1.37
CDC42SE2-201ENST00000360515 CFHR1Q03591 330 aa6.51□□□□□ -1.37
CDC42SE2-201ENST00000360515 CFAP221Q4G0U5 840 aa6.51□□□□□ -1.37
CDC42SE2-201ENST00000360515 EEF1DP3Q658K8 133 aa6.51□□□□□ -1.37
CDC42SE2-201ENST00000360515 MPZL3Q6UWV2 235 aa6.51□□□□□ -1.37
CDC42SE2-201ENST00000360515 TMEM92Q6UXU6 159 aa6.51□□□□□ -1.37
CDC42SE2-201ENST00000360515 DDX42Q86XP3 938 aaKnown RBP eCLIP6.51□□□□□ -1.37
CDC42SE2-201ENST00000360515 SLC41A1Q8IVJ1 513 aa6.51□□□□□ -1.37
CDC42SE2-201ENST00000360515 ACSL6Q9UKU0 697 aa6.51□□□□□ -1.37
CDC42SE2-201ENST00000360515 PCNX2A6NKB5 2137 aa6.51□□□□□ -1.37
CDC42SE2-201ENST00000360515 B8ZZF3 427 aa6.51□□□□□ -1.37
CDC42SE2-201ENST00000360515 CER1O95813 267 aa6.51□□□□□ -1.37
CDC42SE2-201ENST00000360515 IGHDP01880 384 aa6.51□□□□□ -1.37
CDC42SE2-201ENST00000360515 GRIA2P42262 883 aa6.51□□□□□ -1.37
CDC42SE2-201ENST00000360515 BRCC3P46736 316 aa6.51□□□□□ -1.37
CDC42SE2-201ENST00000360515 GFPT1Q06210 699 aaPredicted RBP6.51□□□□□ -1.37
CDC42SE2-201ENST00000360515 NR1H3Q13133 447 aa6.51□□□□□ -1.37
CDC42SE2-201ENST00000360515 MTF1Q14872 753 aa6.51□□□□□ -1.37
CDC42SE2-201ENST00000360515 XKR9Q5GH70 373 aa6.51□□□□□ -1.37
CDC42SE2-201ENST00000360515 FBXL19Q6PCT2 694 aa6.51□□□□□ -1.37
CDC42SE2-201ENST00000360515 HHIPQ96QV1 700 aa6.51□□□□□ -1.37
CDC42SE2-201ENST00000360515 DPH1Q9BZG8 443 aa6.51□□□□□ -1.37
CDC42SE2-201ENST00000360515 TM6SF1Q9BZW5 370 aa6.51□□□□□ -1.37
CDC42SE2-201ENST00000360515 ST6GALNAC4Q9H4F1 302 aa6.51□□□□□ -1.37
CDC42SE2-201ENST00000360515 SMOC1Q9H4F8 434 aa6.51□□□□□ -1.37
CDC42SE2-201ENST00000360515 PARP2Q9UGN5 583 aa6.51□□□□□ -1.37
CDC42SE2-201ENST00000360515 PATE3B3GLJ2 98 aa6.51□□□□□ -1.37
CDC42SE2-201ENST00000360515 INO80B-WBP1J3KQ70 363 aa6.51□□□□□ -1.37
CDC42SE2-201ENST00000360515 CSH1P0DML2 217 aa6.51□□□□□ -1.37
CDC42SE2-201ENST00000360515 CSH2P0DML3 217 aa6.51□□□□□ -1.37
CDC42SE2-201ENST00000360515 ABCG1P45844 678 aa6.51□□□□□ -1.37
CDC42SE2-201ENST00000360515 TNK2Q07912 1038 aa6.51□□□□□ -1.37
CDC42SE2-201ENST00000360515 PSMD2Q13200 908 aa6.51□□□□□ -1.37
CDC42SE2-201ENST00000360515 SLC10A6Q3KNW5 377 aa6.51□□□□□ -1.37
CDC42SE2-201ENST00000360515 CDCP2Q5VXM1 449 aa6.51□□□□□ -1.37
CDC42SE2-201ENST00000360515 MICU3Q86XE3 530 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms