RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 CAMKK2Q96RR4 588 aa13.72□□□□□ -0.21
SRGAP3-201ENST00000360413 FHOD1Q9Y613 1164 aa13.72□□□□□ -0.21
SRGAP3-201ENST00000360413 IL6P05231 212 aa13.72□□□□□ -0.21
SRGAP3-201ENST00000360413 SPICE1Q8N0Z3 855 aa13.72□□□□□ -0.21
SRGAP3-201ENST00000360413 NSUN6Q8TEA1 469 aaKnown RBP13.72□□□□□ -0.21
SRGAP3-201ENST00000360413 HEY2Q9UBP5 337 aa13.72□□□□□ -0.21
SRGAP3-201ENST00000360413 LRCH1Q9Y2L9 728 aa13.72□□□□□ -0.21
SRGAP3-201ENST00000360413 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.72□□□□□ -0.21
SRGAP3-201ENST00000360413 YWHABP31946 246 aaKnown RBP13.72□□□□□ -0.21
SRGAP3-201ENST00000360413 CSE1LP55060 971 aaKnown RBP13.72□□□□□ -0.21
SRGAP3-201ENST00000360413 C11orf74Q86VG3 221 aa13.72□□□□□ -0.21
SRGAP3-201ENST00000360413 SUGP1Q8IWZ8 645 aaKnown RBP13.72□□□□□ -0.21
SRGAP3-201ENST00000360413 MMGT1Q8N4V1 131 aa13.72□□□□□ -0.21
SRGAP3-201ENST00000360413 HNRNPLLQ8WVV9 542 aaKnown RBP13.72□□□□□ -0.21
SRGAP3-201ENST00000360413 E2F7Q96AV8 911 aa13.72□□□□□ -0.21
SRGAP3-201ENST00000360413 SHCBP1LQ9BZQ2 653 aa13.72□□□□□ -0.21
SRGAP3-201ENST00000360413 SYNDIG1Q9H7V2 258 aa13.72□□□□□ -0.21
SRGAP3-201ENST00000360413 CD209Q9NNX6 404 aa13.72□□□□□ -0.21
SRGAP3-201ENST00000360413 PHTF1Q9UMS5 762 aa13.72□□□□□ -0.21
SRGAP3-201ENST00000360413 MYH7P12883 1935 aa13.72□□□□□ -0.21
SRGAP3-201ENST00000360413 SLC2A3P11169 496 aa13.72□□□□□ -0.21
SRGAP3-201ENST00000360413 CCDC130P13994 396 aa13.72□□□□□ -0.21
SRGAP3-201ENST00000360413 SERPINB5P36952 375 aa13.72□□□□□ -0.21
SRGAP3-201ENST00000360413 UCMAQ8WVF2 138 aa13.72□□□□□ -0.21
SRGAP3-201ENST00000360413 CALB2P22676 271 aa13.72□□□□□ -0.21
SRGAP3-201ENST00000360413 PGBD3Q8N328 593 aa13.72□□□□□ -0.21
SRGAP3-201ENST00000360413 CTNNAL1Q9UBT7 734 aa13.72□□□□□ -0.21
SRGAP3-201ENST00000360413 TRIM43BA6NCK2 446 aa13.71□□□□□ -0.21
SRGAP3-201ENST00000360413 FAM25AB3EWG3 89 aa13.71□□□□□ -0.21
SRGAP3-201ENST00000360413 FAM25CB3EWG5 89 aa13.71□□□□□ -0.21
SRGAP3-201ENST00000360413 FAM25GB3EWG6 89 aa13.71□□□□□ -0.21
SRGAP3-201ENST00000360413 TNFAIP8O95379 198 aa13.71□□□□□ -0.21
SRGAP3-201ENST00000360413 NFX1Q12986 1120 aaKnown RBP13.71□□□□□ -0.21
SRGAP3-201ENST00000360413 ZCCHC8Q6NZY4 707 aaKnown RBP13.71□□□□□ -0.21
SRGAP3-201ENST00000360413 DENND6AQ8IWF6 608 aa13.71□□□□□ -0.21
SRGAP3-201ENST00000360413 TLR7Q9NYK1 1049 aaKnown RBP13.71□□□□□ -0.21
SRGAP3-201ENST00000360413 FCER1AP12319 257 aa13.71□□□□□ -0.21
SRGAP3-201ENST00000360413 AKR1B1P15121 316 aa13.71□□□□□ -0.21
SRGAP3-201ENST00000360413 CDH6P55285 790 aa13.71□□□□□ -0.21
SRGAP3-201ENST00000360413 PEX3P56589 373 aa13.71□□□□□ -0.21
SRGAP3-201ENST00000360413 PTCH1Q13635 1447 aa13.71□□□□□ -0.21
SRGAP3-201ENST00000360413 CENPTQ96BT3 561 aa13.71□□□□□ -0.21
SRGAP3-201ENST00000360413 DFFAO00273 331 aa13.71□□□□□ -0.21
SRGAP3-201ENST00000360413 GYG1P46976 350 aa13.71□□□□□ -0.21
SRGAP3-201ENST00000360413 MAGEB18Q96M61 343 aa13.71□□□□□ -0.21
SRGAP3-201ENST00000360413 SERPINB12Q96P63 405 aa13.71□□□□□ -0.21
SRGAP3-201ENST00000360413 RMDN3Q96TC7 470 aa13.71□□□□□ -0.21
SRGAP3-201ENST00000360413 VPS33BQ9H267 617 aa13.71□□□□□ -0.21
SRGAP3-201ENST00000360413 SEMA3DO95025 777 aa13.71□□□□□ -0.21
SRGAP3-201ENST00000360413 HPGDP15428 266 aa13.71□□□□□ -0.21
SRGAP3-201ENST00000360413 PECAM1P16284 738 aaPredicted RBP13.71□□□□□ -0.21
SRGAP3-201ENST00000360413 HSD17B3P37058 310 aa13.71□□□□□ -0.21
SRGAP3-201ENST00000360413 LIFRP42702 1097 aa13.71□□□□□ -0.21
SRGAP3-201ENST00000360413 SESN2P58004 480 aaPredicted RBP13.71□□□□□ -0.21
SRGAP3-201ENST00000360413 SLC29A2Q14542 456 aa13.71□□□□□ -0.21
SRGAP3-201ENST00000360413 TAB1Q15750 504 aa13.71□□□□□ -0.21
SRGAP3-201ENST00000360413 KIZQ2M2Z5 673 aa13.71□□□□□ -0.21
SRGAP3-201ENST00000360413 SLC27A3Q5K4L6 730 aa13.71□□□□□ -0.21
SRGAP3-201ENST00000360413 CLEC4GQ6UXB4 293 aa13.71□□□□□ -0.21
SRGAP3-201ENST00000360413 FAM81AQ8TBF8 368 aa13.71□□□□□ -0.21
SRGAP3-201ENST00000360413 C9orf72Q96LT7 481 aa13.71□□□□□ -0.21
SRGAP3-201ENST00000360413 WWP2O00308 870 aa13.71□□□□□ -0.22
SRGAP3-201ENST00000360413 PEX1O43933 1283 aa13.71□□□□□ -0.22
SRGAP3-201ENST00000360413 BAIAP3O94812 1187 aa13.71□□□□□ -0.22
SRGAP3-201ENST00000360413 CPB1P15086 417 aa13.71□□□□□ -0.22
SRGAP3-201ENST00000360413 S100GP29377 79 aa13.71□□□□□ -0.22
SRGAP3-201ENST00000360413 GJA8P48165 433 aa13.71□□□□□ -0.22
SRGAP3-201ENST00000360413 NPY2RP49146 381 aa13.71□□□□□ -0.22
SRGAP3-201ENST00000360413 PRELPP51888 382 aa13.71□□□□□ -0.22
SRGAP3-201ENST00000360413 TAF2Q6P1X5 1199 aa13.71□□□□□ -0.22
SRGAP3-201ENST00000360413 SPATA2LQ8IUW3 424 aaPredicted RBP13.71□□□□□ -0.22
SRGAP3-201ENST00000360413 KIFC1Q9BW19 673 aa13.71□□□□□ -0.22
SRGAP3-201ENST00000360413 PHACTR1Q9C0D0 580 aa13.71□□□□□ -0.22
SRGAP3-201ENST00000360413 FAM49AQ9H0Q0 323 aaPredicted RBP13.71□□□□□ -0.22
SRGAP3-201ENST00000360413 E2F8A0AVK6 867 aa13.71□□□□□ -0.22
SRGAP3-201ENST00000360413 DYNC1LI2O43237 492 aaPredicted RBP13.71□□□□□ -0.22
SRGAP3-201ENST00000360413 RNASEH1O60930 286 aaKnown RBP13.71□□□□□ -0.22
SRGAP3-201ENST00000360413 PIK3R1P27986 724 aa13.71□□□□□ -0.22
SRGAP3-201ENST00000360413 IL13P35225 146 aa13.71□□□□□ -0.22
SRGAP3-201ENST00000360413 RFC5P40937 340 aa13.71□□□□□ -0.22
SRGAP3-201ENST00000360413 ACADSBP45954 432 aa13.71□□□□□ -0.22
SRGAP3-201ENST00000360413 SPANXN2Q5MJ10 180 aa13.71□□□□□ -0.22
SRGAP3-201ENST00000360413 KLHL24Q6TFL4 600 aa13.71□□□□□ -0.22
SRGAP3-201ENST00000360413 ELMO2Q96JJ3 720 aa13.71□□□□□ -0.22
SRGAP3-201ENST00000360413 BHMT2Q9H2M3 363 aa13.71□□□□□ -0.22
SRGAP3-201ENST00000360413 INTS13Q9NVM9 706 aa13.71□□□□□ -0.22
SRGAP3-201ENST00000360413 EURLQ9NYK6 297 aa13.71□□□□□ -0.22
SRGAP3-201ENST00000360413 ABCB11O95342 1321 aa13.71□□□□□ -0.22
SRGAP3-201ENST00000360413 GUCY1A2P33402 732 aa13.7□□□□□ -0.22
SRGAP3-201ENST00000360413 AP1S2P56377 157 aa13.7□□□□□ -0.22
SRGAP3-201ENST00000360413 TSC22D1Q15714 1073 aa13.7□□□□□ -0.22
SRGAP3-201ENST00000360413 EDRF1Q3B7T1 1238 aa13.7□□□□□ -0.22
SRGAP3-201ENST00000360413 TMEM63BQ5T3F8 832 aa13.7□□□□□ -0.22
SRGAP3-201ENST00000360413 CYP4A22Q5TCH4 519 aa13.7□□□□□ -0.22
SRGAP3-201ENST00000360413 ADCK2Q7Z695 626 aa13.7□□□□□ -0.22
SRGAP3-201ENST00000360413 PTPRN2Q92932 1015 aa13.7□□□□□ -0.22
SRGAP3-201ENST00000360413 HMG20AQ9NP66 347 aa13.7□□□□□ -0.22
SRGAP3-201ENST00000360413 C15orf41Q9Y2V0 281 aa13.7□□□□□ -0.22
SRGAP3-201ENST00000360413 ZSWIM7Q19AV6 140 aa13.7□□□□□ -0.22
SRGAP3-201ENST00000360413 PACS2Q86VP3 889 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms