RNA–Protein interactions for RNA: ENST00000360004.5

HLA-DRB1-201, Transcript of major histocompatibility complex, class II, DR beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DRB1, Length 1,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1-201ENST00000360004 PLXNA3P51805 1871 aa20.44■□□□□ 0.86
HLA-DRB1-201ENST00000360004 MTHFRP42898 656 aa20.44■□□□□ 0.86
HLA-DRB1-201ENST00000360004 TUFMP49411 452 aaKnown RBP20.44■□□□□ 0.86
HLA-DRB1-201ENST00000360004 NDST1P52848 882 aa20.44■□□□□ 0.86
HLA-DRB1-201ENST00000360004 CUL2Q13617 745 aa20.44■□□□□ 0.86
HLA-DRB1-201ENST00000360004 KRT31Q15323 416 aa20.44■□□□□ 0.86
HLA-DRB1-201ENST00000360004 RTL10Q7L3V2 364 aa20.44■□□□□ 0.86
HLA-DRB1-201ENST00000360004 UNC93AQ86WB7 457 aa20.44■□□□□ 0.86
HLA-DRB1-201ENST00000360004 SMRP1Q8NCR6 262 aa20.44■□□□□ 0.86
HLA-DRB1-201ENST00000360004 FAXDC2Q96IV6 333 aa20.44■□□□□ 0.86
HLA-DRB1-201ENST00000360004 BCO2Q9BYV7 579 aa20.44■□□□□ 0.86
HLA-DRB1-201ENST00000360004 SDCBP2Q9H190 292 aa20.44■□□□□ 0.86
HLA-DRB1-201ENST00000360004 ADAM7Q9H2U9 754 aa20.44■□□□□ 0.86
HLA-DRB1-201ENST00000360004 TSPY26PQ9H489 355 aa20.44■□□□□ 0.86
HLA-DRB1-201ENST00000360004 USP15Q9Y4E8 981 aaPredicted RBP20.44■□□□□ 0.86
HLA-DRB1-201ENST00000360004 ATP8B3O60423 1300 aa20.44■□□□□ 0.86
HLA-DRB1-201ENST00000360004 MBTPS2O43462 519 aa20.43■□□□□ 0.86
HLA-DRB1-201ENST00000360004 ATP2C2O75185 946 aa20.43■□□□□ 0.86
HLA-DRB1-201ENST00000360004 SEC24AO95486 1093 aa20.43■□□□□ 0.86
HLA-DRB1-201ENST00000360004 PTPN1P18031 435 aaKnown RBP20.43■□□□□ 0.86
HLA-DRB1-201ENST00000360004 EPHB3P54753 998 aa20.43■□□□□ 0.86
HLA-DRB1-201ENST00000360004 TWF1Q12792 350 aa20.43■□□□□ 0.86
HLA-DRB1-201ENST00000360004 VEPH1Q14D04 833 aa20.43■□□□□ 0.86
HLA-DRB1-201ENST00000360004 IQCEQ6IPM2 695 aa20.43■□□□□ 0.86
HLA-DRB1-201ENST00000360004 LRRTM3Q86VH5 581 aa20.43■□□□□ 0.86
HLA-DRB1-201ENST00000360004 B3GALNT2Q8NCR0 500 aa20.43■□□□□ 0.86
HLA-DRB1-201ENST00000360004 CMASQ8NFW8 434 aaPredicted RBP20.43■□□□□ 0.86
HLA-DRB1-201ENST00000360004 MYLPFQ96A32 169 aa20.43■□□□□ 0.86
HLA-DRB1-201ENST00000360004 PCMTD1Q96MG8 357 aaPredicted RBP20.43■□□□□ 0.86
HLA-DRB1-201ENST00000360004 NECTIN4Q96NY8 510 aa20.43■□□□□ 0.86
HLA-DRB1-201ENST00000360004 NT5C1AQ9BXI3 368 aa20.43■□□□□ 0.86
HLA-DRB1-201ENST00000360004 PRKD2Q9BZL6 878 aa20.43■□□□□ 0.86
HLA-DRB1-201ENST00000360004 DPEP3Q9H4B8 488 aa20.43■□□□□ 0.86
HLA-DRB1-201ENST00000360004 YIPF1Q9Y548 306 aa20.43■□□□□ 0.86
HLA-DRB1-201ENST00000360004 MYBPHLA2RUH7 354 aa20.42■□□□□ 0.86
HLA-DRB1-201ENST00000360004 GTPBP10A4D1E9 387 aaKnown RBP20.42■□□□□ 0.86
HLA-DRB1-201ENST00000360004 SLC34A2O95436 690 aa20.42■□□□□ 0.86
HLA-DRB1-201ENST00000360004 HOXA9P31269 272 aa20.42■□□□□ 0.86
HLA-DRB1-201ENST00000360004 KCNQ1P51787 676 aa20.42■□□□□ 0.86
HLA-DRB1-201ENST00000360004 ORC1Q13415 861 aa20.42■□□□□ 0.86
HLA-DRB1-201ENST00000360004 ZNF394Q53GI3 561 aa20.42■□□□□ 0.86
HLA-DRB1-201ENST00000360004 CYP26C1Q6V0L0 522 aa20.42■□□□□ 0.86
HLA-DRB1-201ENST00000360004 GPR149Q86SP6 731 aa20.42■□□□□ 0.86
HLA-DRB1-201ENST00000360004 ACOT1Q86TX2 421 aa20.42■□□□□ 0.86
HLA-DRB1-201ENST00000360004 SCN4BQ8IWT1 228 aa20.42■□□□□ 0.86
HLA-DRB1-201ENST00000360004 DHX40Q8IX18 779 aaKnown RBP20.42■□□□□ 0.86
HLA-DRB1-201ENST00000360004 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.42■□□□□ 0.86
HLA-DRB1-201ENST00000360004 MYCBPAPQ8TBZ2 947 aa20.42■□□□□ 0.86
HLA-DRB1-201ENST00000360004 ZNF512Q96ME7 567 aaPredicted RBP20.42■□□□□ 0.86
HLA-DRB1-201ENST00000360004 ASB2Q96Q27 587 aa20.42■□□□□ 0.86
HLA-DRB1-201ENST00000360004 CBX8Q9HC52 389 aa20.42■□□□□ 0.86
HLA-DRB1-201ENST00000360004 CISHQ9NSE2 258 aa20.42■□□□□ 0.86
HLA-DRB1-201ENST00000360004 TMLHEQ9NVH6 421 aa20.42■□□□□ 0.86
HLA-DRB1-201ENST00000360004 ANXA13P27216 316 aa20.41■□□□□ 0.86
HLA-DRB1-201ENST00000360004 COPB1P53618 953 aaKnown RBP20.41■□□□□ 0.86
HLA-DRB1-201ENST00000360004 RPL10AP62906 217 aaKnown RBP20.41■□□□□ 0.86
HLA-DRB1-201ENST00000360004 CBX2Q14781 532 aaPredicted RBP20.41■□□□□ 0.86
HLA-DRB1-201ENST00000360004 NCAPHQ15003 741 aa20.41■□□□□ 0.86
HLA-DRB1-201ENST00000360004 FILIP1LQ4L180 1135 aa20.41■□□□□ 0.86
HLA-DRB1-201ENST00000360004 LRSAM1Q6UWE0 723 aa20.41■□□□□ 0.86
HLA-DRB1-201ENST00000360004 RRAGAQ7L523 313 aa20.41■□□□□ 0.86
HLA-DRB1-201ENST00000360004 FAM81BQ96LP2 452 aa20.41■□□□□ 0.86
HLA-DRB1-201ENST00000360004 ARID3AQ99856 593 aa20.41■□□□□ 0.86
HLA-DRB1-201ENST00000360004 S1PR5Q9H228 398 aa20.41■□□□□ 0.86
HLA-DRB1-201ENST00000360004 UBE2TQ9NPD8 197 aaPredicted RBP20.41■□□□□ 0.86
HLA-DRB1-201ENST00000360004 CRTAC1Q9NQ79 661 aa20.41■□□□□ 0.86
HLA-DRB1-201ENST00000360004 PCDHB4Q9Y5E5 795 aa20.41■□□□□ 0.86
HLA-DRB1-201ENST00000360004 GRXCR2A6NFK2 248 aa20.4■□□□□ 0.86
HLA-DRB1-201ENST00000360004 SOAT2O75908 522 aa20.4■□□□□ 0.86
HLA-DRB1-201ENST00000360004 SLC9A1P19634 815 aa20.4■□□□□ 0.86
HLA-DRB1-201ENST00000360004 MFAP3P55082 362 aa20.4■□□□□ 0.86
HLA-DRB1-201ENST00000360004 INCA1Q0VD86 236 aa20.4■□□□□ 0.86
HLA-DRB1-201ENST00000360004 MIIPQ5JXC2 388 aa20.4■□□□□ 0.86
HLA-DRB1-201ENST00000360004 TRIM65Q6PJ69 517 aa20.4■□□□□ 0.86
HLA-DRB1-201ENST00000360004 ITIH5Q86UX2 942 aa20.4■□□□□ 0.86
HLA-DRB1-201ENST00000360004 LUZP1Q86V48 1076 aa20.4■□□□□ 0.86
HLA-DRB1-201ENST00000360004 FUBP3Q96I24 572 aaKnown RBP eCLIP20.4■□□□□ 0.86
HLA-DRB1-201ENST00000360004 HEXIM2Q96MH2 286 aaKnown RBP20.4■□□□□ 0.86
HLA-DRB1-201ENST00000360004 FAM124BQ9H5Z6 455 aaPredicted RBP20.4■□□□□ 0.86
HLA-DRB1-201ENST00000360004 ABCB6Q9NP58 842 aa20.4■□□□□ 0.86
HLA-DRB1-201ENST00000360004 HSFX1Q9UBD0 423 aa20.4■□□□□ 0.86
HLA-DRB1-201ENST00000360004 HMGXB4Q9UGU5 601 aa20.4■□□□□ 0.86
HLA-DRB1-201ENST00000360004 LIMA1Q9UHB6 759 aaKnown RBP20.4■□□□□ 0.86
HLA-DRB1-201ENST00000360004 CILPO75339 1184 aa20.39■□□□□ 0.85
HLA-DRB1-201ENST00000360004 SERPINC1P01008 464 aa20.39■□□□□ 0.85
HLA-DRB1-201ENST00000360004 HAPLN1P10915 354 aaPredicted RBP20.39■□□□□ 0.85
HLA-DRB1-201ENST00000360004 KRT5P13647 590 aa20.39■□□□□ 0.85
HLA-DRB1-201ENST00000360004 PTPN2P17706 415 aa20.39■□□□□ 0.85
HLA-DRB1-201ENST00000360004 BDNFP23560 247 aa20.39■□□□□ 0.85
HLA-DRB1-201ENST00000360004 CYP2F1P24903 491 aa20.39■□□□□ 0.85
HLA-DRB1-201ENST00000360004 GRIK1P39086 918 aa20.39■□□□□ 0.85
HLA-DRB1-201ENST00000360004 CCDC142Q17RM4 750 aa20.39■□□□□ 0.85
HLA-DRB1-201ENST00000360004 FAM171BQ6P995 826 aa20.39■□□□□ 0.85
HLA-DRB1-201ENST00000360004 GRASPQ7Z6J2 395 aaPredicted RBP20.39■□□□□ 0.85
HLA-DRB1-201ENST00000360004 ARHGEF19Q8IW93 802 aa20.39■□□□□ 0.85
HLA-DRB1-201ENST00000360004 TTC9BQ8N6N2 239 aa20.39■□□□□ 0.85
HLA-DRB1-201ENST00000360004 PCED1BQ96HM7 432 aa20.39■□□□□ 0.85
HLA-DRB1-201ENST00000360004 LPIN3Q9BQK8 851 aa20.39■□□□□ 0.85
HLA-DRB1-201ENST00000360004 CORO1BQ9BR76 489 aa20.39■□□□□ 0.85
HLA-DRB1-201ENST00000360004 LSM14BQ9BX40 385 aaKnown RBP20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms