RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 ACAD9Q9H845 621 aa16.68■□□□□ 0.26
COL18A1-203ENST00000359759 TUFT1Q9NNX1 390 aa16.68■□□□□ 0.26
COL18A1-203ENST00000359759 MAP3K6O95382 1288 aa16.67■□□□□ 0.26
COL18A1-203ENST00000359759 KAT2BQ92831 832 aa16.67■□□□□ 0.26
COL18A1-203ENST00000359759 CNGB3Q9NQW8 809 aa16.67■□□□□ 0.26
COL18A1-203ENST00000359759 ATP7AQ04656 1500 aa16.67■□□□□ 0.26
COL18A1-203ENST00000359759 HSD17B3P37058 310 aa16.67■□□□□ 0.26
COL18A1-203ENST00000359759 PSMC6P62333 389 aa16.67■□□□□ 0.26
COL18A1-203ENST00000359759 SHROOM1Q2M3G4 852 aaPredicted RBP16.67■□□□□ 0.26
COL18A1-203ENST00000359759 KRT78Q8N1N4 520 aa16.67■□□□□ 0.26
COL18A1-203ENST00000359759 TTLL6Q8N841 843 aa16.67■□□□□ 0.26
COL18A1-203ENST00000359759 PNKPQ96T60 521 aa16.67■□□□□ 0.26
COL18A1-203ENST00000359759 RNF112Q9ULX5 631 aa16.67■□□□□ 0.26
COL18A1-203ENST00000359759 TRIM49D1C9J1S8 452 aa16.67■□□□□ 0.26
COL18A1-203ENST00000359759 NQO1P15559 274 aaKnown RBP16.67■□□□□ 0.26
COL18A1-203ENST00000359759 GTF2H1P32780 548 aa16.67■□□□□ 0.26
COL18A1-203ENST00000359759 ATP1A4Q13733 1029 aa16.67■□□□□ 0.26
COL18A1-203ENST00000359759 NAB2Q15742 525 aa16.67■□□□□ 0.26
COL18A1-203ENST00000359759 PLA2G4FQ68DD2 849 aa16.67■□□□□ 0.26
COL18A1-203ENST00000359759 FAM25AB3EWG3 89 aa16.67■□□□□ 0.26
COL18A1-203ENST00000359759 FAM25CB3EWG5 89 aa16.67■□□□□ 0.26
COL18A1-203ENST00000359759 FAM25GB3EWG6 89 aa16.67■□□□□ 0.26
COL18A1-203ENST00000359759 FLT3P36888 993 aa16.67■□□□□ 0.26
COL18A1-203ENST00000359759 ATP12AP54707 1039 aa16.67■□□□□ 0.26
COL18A1-203ENST00000359759 OASLQ15646 514 aaKnown RBP16.67■□□□□ 0.26
COL18A1-203ENST00000359759 C12orf60Q5U649 245 aa16.67■□□□□ 0.26
COL18A1-203ENST00000359759 NOA1Q8NC60 698 aaKnown RBP16.67■□□□□ 0.26
COL18A1-203ENST00000359759 OPTNQ96CV9 577 aa16.67■□□□□ 0.26
COL18A1-203ENST00000359759 ROGDIQ9GZN7 287 aa16.67■□□□□ 0.26
COL18A1-203ENST00000359759 HDHD2Q9H0R4 259 aa16.67■□□□□ 0.26
COL18A1-203ENST00000359759 FOXP2O15409 715 aa16.67■□□□□ 0.26
COL18A1-203ENST00000359759 RGS4P49798 205 aa16.67■□□□□ 0.26
COL18A1-203ENST00000359759 KCNB1Q14721 858 aa16.67■□□□□ 0.26
COL18A1-203ENST00000359759 ZNF614Q8N883 585 aa16.67■□□□□ 0.26
COL18A1-203ENST00000359759 KIF2CQ99661 725 aa16.67■□□□□ 0.26
COL18A1-203ENST00000359759 IGSF1Q8N6C5 1336 aa16.67■□□□□ 0.26
COL18A1-203ENST00000359759 H7C1W4 665 aa16.67■□□□□ 0.26
COL18A1-203ENST00000359759 CPSF4O95639 269 aaKnown RBP16.67■□□□□ 0.26
COL18A1-203ENST00000359759 COILP38432 576 aaPredicted RBP16.67■□□□□ 0.26
COL18A1-203ENST00000359759 GLRBP48167 497 aa16.67■□□□□ 0.26
COL18A1-203ENST00000359759 ST13P50502 369 aaKnown RBP16.67■□□□□ 0.26
COL18A1-203ENST00000359759 EPHA7Q15375 998 aa16.67■□□□□ 0.26
COL18A1-203ENST00000359759 KRT77Q7Z794 578 aa16.67■□□□□ 0.26
COL18A1-203ENST00000359759 CASKIN2Q8WXE0 1202 aa16.67■□□□□ 0.26
COL18A1-203ENST00000359759 ZDHHC9Q9Y397 364 aa16.67■□□□□ 0.26
COL18A1-203ENST00000359759 ZFYVE16Q7Z3T8 1539 aa16.67■□□□□ 0.26
COL18A1-203ENST00000359759 CAPN1P07384 714 aa16.66■□□□□ 0.26
COL18A1-203ENST00000359759 GPD1P21695 349 aa16.66■□□□□ 0.26
COL18A1-203ENST00000359759 CSNK2BP67870 215 aa16.66■□□□□ 0.26
COL18A1-203ENST00000359759 COX10Q12887 443 aa16.66■□□□□ 0.26
COL18A1-203ENST00000359759 HIC2Q96JB3 615 aa16.66■□□□□ 0.26
COL18A1-203ENST00000359759 CYP4F12Q9HCS2 524 aa16.66■□□□□ 0.26
COL18A1-203ENST00000359759 TMEM94Q12767 1356 aa16.66■□□□□ 0.26
COL18A1-203ENST00000359759 TRIM13O60858 407 aa16.66■□□□□ 0.26
COL18A1-203ENST00000359759 PBLDP30039 288 aaPredicted RBP16.66■□□□□ 0.26
COL18A1-203ENST00000359759 USP11P51784 963 aa16.66■□□□□ 0.26
COL18A1-203ENST00000359759 NR1I3Q14994 352 aa16.66■□□□□ 0.26
COL18A1-203ENST00000359759 MGAT5BQ3V5L5 792 aa16.66■□□□□ 0.26
COL18A1-203ENST00000359759 ARMCX4Q5H9R4 360 aa16.66■□□□□ 0.26
COL18A1-203ENST00000359759 NLRP9Q7RTR0 991 aa16.66■□□□□ 0.26
COL18A1-203ENST00000359759 CD209Q9NNX6 404 aa16.66■□□□□ 0.26
COL18A1-203ENST00000359759 LSM7Q9UK45 103 aaKnown RBP16.66■□□□□ 0.26
COL18A1-203ENST00000359759 ARAP3Q8WWN8 1544 aa16.66■□□□□ 0.26
COL18A1-203ENST00000359759 TRPC5OSA6NMA1 111 aa16.66■□□□□ 0.26
COL18A1-203ENST00000359759 HSPA13P48723 471 aa16.66■□□□□ 0.26
COL18A1-203ENST00000359759 STAT5BP51692 787 aa16.66■□□□□ 0.26
COL18A1-203ENST00000359759 RBP5P82980 135 aa16.66■□□□□ 0.26
COL18A1-203ENST00000359759 GPAT2Q6NUI2 795 aa16.66■□□□□ 0.26
COL18A1-203ENST00000359759 LDHDQ86WU2 507 aa16.66■□□□□ 0.26
COL18A1-203ENST00000359759 PPIL6Q8IXY8 311 aa16.66■□□□□ 0.26
COL18A1-203ENST00000359759 MRPL39Q9NYK5 338 aaKnown RBP16.66■□□□□ 0.26
COL18A1-203ENST00000359759 PDP2Q9P2J9 529 aa16.66■□□□□ 0.26
COL18A1-203ENST00000359759 HEATR9A2RTY3 570 aa16.66■□□□□ 0.26
COL18A1-203ENST00000359759 MMP10P09238 476 aa16.66■□□□□ 0.26
COL18A1-203ENST00000359759 ALOX15P16050 662 aaPredicted RBP16.66■□□□□ 0.26
COL18A1-203ENST00000359759 CLEC16AQ2KHT3 1053 aa16.66■□□□□ 0.26
COL18A1-203ENST00000359759 USP39Q53GS9 565 aaKnown RBP16.66■□□□□ 0.26
COL18A1-203ENST00000359759 USP38Q8NB14 1042 aa16.66■□□□□ 0.26
COL18A1-203ENST00000359759 C19orf18Q8NEA5 215 aa16.66■□□□□ 0.26
COL18A1-203ENST00000359759 ISCUQ9H1K1 167 aa16.66■□□□□ 0.26
COL18A1-203ENST00000359759 KIAA0556O60303 1618 aa16.66■□□□□ 0.26
COL18A1-203ENST00000359759 GSG1L2A8MUP6 293 aa16.66■□□□□ 0.26
COL18A1-203ENST00000359759 NR5A2O00482 541 aa16.66■□□□□ 0.26
COL18A1-203ENST00000359759 ROPN1BQ9BZX4 212 aaPredicted RBP16.66■□□□□ 0.26
COL18A1-203ENST00000359759 ROPN1Q9HAT0 212 aaPredicted RBP16.66■□□□□ 0.26
COL18A1-203ENST00000359759 ACADSP16219 412 aa16.65■□□□□ 0.26
COL18A1-203ENST00000359759 ORC1Q13415 861 aa16.65■□□□□ 0.26
COL18A1-203ENST00000359759 RSBN1Q5VWQ0 802 aaPredicted RBP16.65■□□□□ 0.26
COL18A1-203ENST00000359759 ERAP2Q6P179 960 aa16.65■□□□□ 0.26
COL18A1-203ENST00000359759 PIPSLA2A3N6 862 aa16.65■□□□□ 0.26
COL18A1-203ENST00000359759 PRR23AA6NEV1 266 aa16.65■□□□□ 0.26
COL18A1-203ENST00000359759 E9PBE3 544 aa16.65■□□□□ 0.26
COL18A1-203ENST00000359759 VWA5AO00534 786 aa16.65■□□□□ 0.26
COL18A1-203ENST00000359759 ZNF682O95780 498 aa16.65■□□□□ 0.26
COL18A1-203ENST00000359759 GSTM1P09488 218 aa16.65■□□□□ 0.26
COL18A1-203ENST00000359759 AMHR2Q16671 573 aa16.65■□□□□ 0.26
COL18A1-203ENST00000359759 LRRC8DQ7L1W4 858 aa16.65■□□□□ 0.26
COL18A1-203ENST00000359759 ZNF512Q96ME7 567 aaPredicted RBP16.65■□□□□ 0.26
COL18A1-203ENST00000359759 TRIM9Q9C026 710 aa16.65■□□□□ 0.26
COL18A1-203ENST00000359759 DNALI1O14645 258 aaPredicted RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms