RNA–Protein interactions for RNA: ENST00000359440.5

TMC3-201, Transcript of transmembrane channel like 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TMC3, Length 4,641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC3-201ENST00000359440 SPC25Q9HBM1 224 aa11.8□□□□□ -0.52
TMC3-201ENST00000359440 AGPSO00116 658 aa11.8□□□□□ -0.52
TMC3-201ENST00000359440 ICAM1P05362 532 aa11.8□□□□□ -0.52
TMC3-201ENST00000359440 PAEPP09466 180 aa11.8□□□□□ -0.52
TMC3-201ENST00000359440 THRAP10827 490 aa11.8□□□□□ -0.52
TMC3-201ENST00000359440 MYL2P10916 166 aa11.8□□□□□ -0.52
TMC3-201ENST00000359440 SERPINB3P29508 390 aa11.8□□□□□ -0.52
TMC3-201ENST00000359440 STAT5BP51692 787 aa11.8□□□□□ -0.52
TMC3-201ENST00000359440 PRKCEQ02156 737 aa11.8□□□□□ -0.52
TMC3-201ENST00000359440 PDK1Q15118 436 aa11.8□□□□□ -0.52
TMC3-201ENST00000359440 PCNX4Q63HM2 1172 aa11.8□□□□□ -0.52
TMC3-201ENST00000359440 PID1Q7Z2X4 250 aa11.8□□□□□ -0.52
TMC3-201ENST00000359440 KATNAL2Q8IYT4 538 aa11.8□□□□□ -0.52
TMC3-201ENST00000359440 ABRAQ8N0Z2 381 aa11.8□□□□□ -0.52
TMC3-201ENST00000359440 PCYOX1LQ8NBM8 494 aa11.8□□□□□ -0.52
TMC3-201ENST00000359440 EME1Q96AY2 570 aa11.8□□□□□ -0.52
TMC3-201ENST00000359440 TNIP3Q96KP6 325 aa11.8□□□□□ -0.52
TMC3-201ENST00000359440 ZDHHC15Q96MV8 337 aa11.8□□□□□ -0.52
TMC3-201ENST00000359440 DTNAQ9Y4J8 743 aa11.8□□□□□ -0.52
TMC3-201ENST00000359440 BAZ2BQ9UIF8 2168 aaKnown RBP11.8□□□□□ -0.52
TMC3-201ENST00000359440 ABCE1P61221 599 aaKnown RBP11.8□□□□□ -0.52
TMC3-201ENST00000359440 NFIL3Q16649 462 aa11.8□□□□□ -0.52
TMC3-201ENST00000359440 KBTBD12Q3ZCT8 623 aa11.8□□□□□ -0.52
TMC3-201ENST00000359440 SNX30Q5VWJ9 437 aa11.8□□□□□ -0.52
TMC3-201ENST00000359440 HGSNATQ68CP4 663 aa11.8□□□□□ -0.52
TMC3-201ENST00000359440 TMEM120AQ9BXJ8 343 aa11.8□□□□□ -0.52
TMC3-201ENST00000359440 ABCF3Q9NUQ8 709 aa11.8□□□□□ -0.52
TMC3-201ENST00000359440 PKD2L2Q9NZM6 624 aa11.8□□□□□ -0.52
TMC3-201ENST00000359440 ACADSBP45954 432 aa11.79□□□□□ -0.52
TMC3-201ENST00000359440 IER5Q5VY09 327 aa11.79□□□□□ -0.52
TMC3-201ENST00000359440 CATSPER4Q7RTX7 472 aa11.79□□□□□ -0.52
TMC3-201ENST00000359440 SLC5A5Q92911 643 aa11.79□□□□□ -0.52
TMC3-201ENST00000359440 KLF6Q99612 283 aaPredicted RBP11.79□□□□□ -0.52
TMC3-201ENST00000359440 FSD1LQ9BXM9 530 aa11.79□□□□□ -0.52
TMC3-201ENST00000359440 TEX13BQ9BXU2 312 aa11.79□□□□□ -0.52
TMC3-201ENST00000359440 KCTD10Q9H3F6 313 aa11.79□□□□□ -0.52
TMC3-201ENST00000359440 TBC1D23Q9NUY8 699 aa11.79□□□□□ -0.52
TMC3-201ENST00000359440 SLCO1B7G3V0H7 640 aa11.79□□□□□ -0.52
TMC3-201ENST00000359440 CYP1A2P05177 515 aa11.79□□□□□ -0.52
TMC3-201ENST00000359440 HNRNPCP07910 306 aaKnown RBP eCLIP11.79□□□□□ -0.52
TMC3-201ENST00000359440 GNAT1P11488 350 aa11.79□□□□□ -0.52
TMC3-201ENST00000359440 PMLP29590 882 aa11.79□□□□□ -0.52
TMC3-201ENST00000359440 CCDC15Q0P6D6 951 aa11.79□□□□□ -0.52
TMC3-201ENST00000359440 PRKG1Q13976 671 aa11.79□□□□□ -0.52
TMC3-201ENST00000359440 SLC47A2Q86VL8 602 aa11.79□□□□□ -0.52
TMC3-201ENST00000359440 FAM71DQ8N9W8 422 aa11.79□□□□□ -0.52
TMC3-201ENST00000359440 AGAP11Q8TF27 550 aa11.79□□□□□ -0.52
TMC3-201ENST00000359440 PGBD4Q96DM1 585 aa11.79□□□□□ -0.52
TMC3-201ENST00000359440 TSPAN17Q96FV3 270 aa11.79□□□□□ -0.52
TMC3-201ENST00000359440 CGRRF1Q99675 332 aa11.79□□□□□ -0.52
TMC3-201ENST00000359440 MMTAG2Q9BU76 263 aaKnown RBP11.79□□□□□ -0.52
TMC3-201ENST00000359440 MARCOQ9UEW3 520 aaPredicted RBP11.79□□□□□ -0.52
TMC3-201ENST00000359440 BCS1LQ9Y276 419 aa11.79□□□□□ -0.52
TMC3-201ENST00000359440 RIMS1Q86UR5 1692 aaKnown RBP11.79□□□□□ -0.52
TMC3-201ENST00000359440 COL5A2P05997 1499 aaPredicted RBP11.79□□□□□ -0.52
TMC3-201ENST00000359440 UBTFL6P0CB48 400 aaPredicted RBP11.79□□□□□ -0.52
TMC3-201ENST00000359440 HSPA1AP0DMV8 641 aaKnown RBP11.79□□□□□ -0.52
TMC3-201ENST00000359440 HSPA1BP0DMV9 641 aaKnown RBP11.79□□□□□ -0.52
TMC3-201ENST00000359440 ARHGDIAP52565 204 aa11.79□□□□□ -0.52
TMC3-201ENST00000359440 PSMC6P62333 389 aa11.79□□□□□ -0.52
TMC3-201ENST00000359440 LRRC38Q5VT99 294 aa11.79□□□□□ -0.52
TMC3-201ENST00000359440 SV2AQ7L0J3 742 aa11.79□□□□□ -0.52
TMC3-201ENST00000359440 SULF1Q8IWU6 871 aa11.79□□□□□ -0.52
TMC3-201ENST00000359440 TAS1R2Q8TE23 839 aa11.79□□□□□ -0.52
TMC3-201ENST00000359440 THAP11Q96EK4 314 aa11.79□□□□□ -0.52
TMC3-201ENST00000359440 XRN1Q8IZH2 1706 aaKnown RBP11.79□□□□□ -0.52
TMC3-201ENST00000359440 FMN2Q9NZ56 1722 aa11.79□□□□□ -0.52
TMC3-201ENST00000359440 ZNF263O14978 683 aa11.79□□□□□ -0.52
TMC3-201ENST00000359440 NPTX2P47972 431 aa11.79□□□□□ -0.52
TMC3-201ENST00000359440 SESN2P58004 480 aaPredicted RBP11.79□□□□□ -0.52
TMC3-201ENST00000359440 CDC42EP1Q00587 391 aa11.79□□□□□ -0.52
TMC3-201ENST00000359440 EFHC1Q5JVL4 640 aa11.79□□□□□ -0.52
TMC3-201ENST00000359440 PRELID2Q8N945 189 aa11.79□□□□□ -0.52
TMC3-201ENST00000359440 RNF139Q8WU17 664 aa11.79□□□□□ -0.52
TMC3-201ENST00000359440 APOPT1Q96IL0 206 aa11.79□□□□□ -0.52
TMC3-201ENST00000359440 MED15Q96RN5 788 aa11.79□□□□□ -0.52
TMC3-201ENST00000359440 CORO1CQ9ULV4 474 aaPredicted RBP11.79□□□□□ -0.52
TMC3-201ENST00000359440 CDYLQ9Y232 598 aa11.79□□□□□ -0.52
TMC3-201ENST00000359440 MRC1P22897 1456 aa11.78□□□□□ -0.52
TMC3-201ENST00000359440 ADGRA3Q8IWK6 1321 aa11.78□□□□□ -0.52
TMC3-201ENST00000359440 C16orf96A6NNT2 1141 aa11.78□□□□□ -0.52
TMC3-201ENST00000359440 ESRRBO95718 433 aa11.78□□□□□ -0.52
TMC3-201ENST00000359440 NAMPTP43490 491 aa11.78□□□□□ -0.52
TMC3-201ENST00000359440 OTUD4Q01804 1114 aaKnown RBP11.78□□□□□ -0.52
TMC3-201ENST00000359440 OVGP1Q12889 678 aa11.78□□□□□ -0.52
TMC3-201ENST00000359440 STX5Q13190 355 aa11.78□□□□□ -0.52
TMC3-201ENST00000359440 RNF149Q8NC42 400 aa11.78□□□□□ -0.52
TMC3-201ENST00000359440 FAR2Q96K12 515 aa11.78□□□□□ -0.52
TMC3-201ENST00000359440 EPAS1Q99814 870 aa11.78□□□□□ -0.52
TMC3-201ENST00000359440 MCM8Q9UJA3 840 aa11.78□□□□□ -0.52
TMC3-201ENST00000359440 CPSF3Q9UKF6 684 aaKnown RBP11.78□□□□□ -0.52
TMC3-201ENST00000359440 DRG1Q9Y295 367 aaKnown RBP11.78□□□□□ -0.52
TMC3-201ENST00000359440 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.78□□□□□ -0.52
TMC3-201ENST00000359440 CHD2O14647 1828 aaKnown RBP11.78□□□□□ -0.52
TMC3-201ENST00000359440 DCAF8L1A6NGE4 600 aa11.78□□□□□ -0.52
TMC3-201ENST00000359440 TRPC5OSA6NMA1 111 aa11.78□□□□□ -0.52
TMC3-201ENST00000359440 CACNA2D1P54289 1103 aa11.78□□□□□ -0.52
TMC3-201ENST00000359440 PLA2G4FQ68DD2 849 aa11.78□□□□□ -0.52
TMC3-201ENST00000359440 OTOP1Q7RTM1 612 aa11.78□□□□□ -0.52
TMC3-201ENST00000359440 SEPT1Q8WYJ6 367 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms