RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 FAM81BQ96LP2 452 aa13.38□□□□□ -0.27
GGPS1-202ENST00000358966 MCEEQ96PE7 176 aa13.38□□□□□ -0.27
GGPS1-202ENST00000358966 KATNAL1Q9BW62 490 aa13.38□□□□□ -0.27
GGPS1-202ENST00000358966 TRIM31Q9BZY9 425 aa13.38□□□□□ -0.27
GGPS1-202ENST00000358966 FAM49BQ9NUQ9 324 aa13.38□□□□□ -0.27
GGPS1-202ENST00000358966 STIM2Q9P246 746 aa13.38□□□□□ -0.27
GGPS1-202ENST00000358966 TMEM59LQ9UK28 342 aa13.38□□□□□ -0.27
GGPS1-202ENST00000358966 IPPQ9Y573 584 aa13.38□□□□□ -0.27
GGPS1-202ENST00000358966 SART1O43290 800 aaKnown RBP13.38□□□□□ -0.27
GGPS1-202ENST00000358966 CHRNA1P02708 482 aa13.38□□□□□ -0.27
GGPS1-202ENST00000358966 PYGLP06737 847 aa13.38□□□□□ -0.27
GGPS1-202ENST00000358966 PEX5P50542 639 aa13.38□□□□□ -0.27
GGPS1-202ENST00000358966 TAS2R40P59535 323 aa13.38□□□□□ -0.27
GGPS1-202ENST00000358966 OGDHQ02218 1023 aa13.38□□□□□ -0.27
GGPS1-202ENST00000358966 ACTN3Q08043 901 aaPredicted RBP13.38□□□□□ -0.27
GGPS1-202ENST00000358966 WDR93Q6P2C0 686 aa13.38□□□□□ -0.27
GGPS1-202ENST00000358966 SMG8Q8ND04 991 aaKnown RBP13.38□□□□□ -0.27
GGPS1-202ENST00000358966 ACTRT1Q8TDG2 376 aa13.38□□□□□ -0.27
GGPS1-202ENST00000358966 MTG1Q9BT17 334 aaPredicted RBP13.38□□□□□ -0.27
GGPS1-202ENST00000358966 SELENOOQ9BVL4 669 aa13.38□□□□□ -0.27
GGPS1-202ENST00000358966 KDM4CQ9H3R0 1056 aa13.38□□□□□ -0.27
GGPS1-202ENST00000358966 AGO3Q9H9G7 860 aaKnown RBP13.38□□□□□ -0.27
GGPS1-202ENST00000358966 L1RE1Q9UN81 338 aa13.38□□□□□ -0.27
GGPS1-202ENST00000358966 CDH23Q9H251 3354 aa13.37□□□□□ -0.27
GGPS1-202ENST00000358966 SPTLC1O15269 473 aa13.37□□□□□ -0.27
GGPS1-202ENST00000358966 TTI1O43156 1089 aa13.37□□□□□ -0.27
GGPS1-202ENST00000358966 CILPO75339 1184 aa13.37□□□□□ -0.27
GGPS1-202ENST00000358966 TOMM70O94826 608 aa13.37□□□□□ -0.27
GGPS1-202ENST00000358966 CYP3A5P20815 502 aa13.37□□□□□ -0.27
GGPS1-202ENST00000358966 MMP8P22894 467 aa13.37□□□□□ -0.27
GGPS1-202ENST00000358966 HADHBP55084 474 aaKnown RBP13.37□□□□□ -0.27
GGPS1-202ENST00000358966 DCAF4L1Q3SXM0 396 aa13.37□□□□□ -0.27
GGPS1-202ENST00000358966 HEXIM2Q96MH2 286 aaKnown RBP13.37□□□□□ -0.27
GGPS1-202ENST00000358966 CPXM1Q96SM3 734 aa13.37□□□□□ -0.27
GGPS1-202ENST00000358966 TRIM51Q9BSJ1 452 aa13.37□□□□□ -0.27
GGPS1-202ENST00000358966 DPEP3Q9H4B8 488 aa13.37□□□□□ -0.27
GGPS1-202ENST00000358966 UVRAGQ9P2Y5 699 aa13.37□□□□□ -0.27
GGPS1-202ENST00000358966 NFU1Q9UMS0 254 aa13.37□□□□□ -0.27
GGPS1-202ENST00000358966 C2CD2Q9Y426 696 aa13.37□□□□□ -0.27
GGPS1-202ENST00000358966 SMIM28A0A1B0GU29 152 aa13.37□□□□□ -0.27
GGPS1-202ENST00000358966 ENO4A6NNW6 628 aa13.37□□□□□ -0.27
GGPS1-202ENST00000358966 TLR3O15455 904 aaKnown RBP13.37□□□□□ -0.27
GGPS1-202ENST00000358966 MTA2O94776 668 aa13.37□□□□□ -0.27
GGPS1-202ENST00000358966 FAM153BP0C7A2 387 aa13.37□□□□□ -0.27
GGPS1-202ENST00000358966 HOXC8P31273 242 aa13.37□□□□□ -0.27
GGPS1-202ENST00000358966 YARSP54577 528 aaKnown RBP13.37□□□□□ -0.27
GGPS1-202ENST00000358966 TNNC1P63316 161 aa13.37□□□□□ -0.27
GGPS1-202ENST00000358966 PTPN11Q06124 597 aaPredicted RBP13.37□□□□□ -0.27
GGPS1-202ENST00000358966 ZNF252P-AS1Q0IIN9 211 aa13.37□□□□□ -0.27
GGPS1-202ENST00000358966 FAM153CQ494X1 144 aa13.37□□□□□ -0.27
GGPS1-202ENST00000358966 TXNRD3NBQ6F5E7 133 aa13.37□□□□□ -0.27
GGPS1-202ENST00000358966 ANKS1BQ7Z6G8 1248 aa13.37□□□□□ -0.27
GGPS1-202ENST00000358966 RASGEF1CQ8N431 466 aa13.37□□□□□ -0.27
GGPS1-202ENST00000358966 EMC1Q8N766 993 aa13.37□□□□□ -0.27
GGPS1-202ENST00000358966 DRAXINQ8NBI3 349 aaPredicted RBP13.37□□□□□ -0.27
GGPS1-202ENST00000358966 C3orf20Q8ND61 904 aa13.37□□□□□ -0.27
GGPS1-202ENST00000358966 PIWIL1Q96J94 861 aaKnown RBP13.37□□□□□ -0.27
GGPS1-202ENST00000358966 SUDS3Q9H7L9 328 aaPredicted RBP13.37□□□□□ -0.27
GGPS1-202ENST00000358966 FAM153AQ9UHL3 310 aa13.37□□□□□ -0.27
GGPS1-202ENST00000358966 ZNF232Q9UNY5 417 aa13.37□□□□□ -0.27
GGPS1-202ENST00000358966 Q9Y3F1 56 aa13.37□□□□□ -0.27
GGPS1-202ENST00000358966 F8VP50 259 aa13.36□□□□□ -0.27
GGPS1-202ENST00000358966 M0QYV0 167 aa13.36□□□□□ -0.27
GGPS1-202ENST00000358966 THPOP40225 353 aa13.36□□□□□ -0.27
GGPS1-202ENST00000358966 FNTAP49354 379 aa13.36□□□□□ -0.27
GGPS1-202ENST00000358966 CRYBB1P53674 252 aaPredicted RBP13.36□□□□□ -0.27
GGPS1-202ENST00000358966 CASP8Q14790 479 aa13.36□□□□□ -0.27
GGPS1-202ENST00000358966 PDCD2Q16342 344 aaPredicted RBP13.36□□□□□ -0.27
GGPS1-202ENST00000358966 CCNI2Q6ZMN8 369 aaPredicted RBP13.36□□□□□ -0.27
GGPS1-202ENST00000358966 ACOT1Q86TX2 421 aa13.36□□□□□ -0.27
GGPS1-202ENST00000358966 RNF169Q8NCN4 708 aa13.36□□□□□ -0.27
GGPS1-202ENST00000358966 C18orf8Q96DM3 657 aa13.36□□□□□ -0.27
GGPS1-202ENST00000358966 CREBZFQ9NS37 354 aa13.36□□□□□ -0.27
GGPS1-202ENST00000358966 G3BP2Q9UN86 482 aaKnown RBP13.36□□□□□ -0.27
GGPS1-202ENST00000358966 ST3GAL5Q9UNP4 418 aa13.36□□□□□ -0.27
GGPS1-202ENST00000358966 PPFIA2O75334 1257 aa13.36□□□□□ -0.27
GGPS1-202ENST00000358966 PDGFRBP09619 1106 aa13.36□□□□□ -0.27
GGPS1-202ENST00000358966 GHRP10912 638 aa13.36□□□□□ -0.27
GGPS1-202ENST00000358966 MRPS6P82932 125 aaKnown RBP13.36□□□□□ -0.27
GGPS1-202ENST00000358966 RBP5P82980 135 aa13.36□□□□□ -0.27
GGPS1-202ENST00000358966 ITIH3Q06033 890 aa13.36□□□□□ -0.27
GGPS1-202ENST00000358966 PHF13Q86YI8 300 aaPredicted RBP13.36□□□□□ -0.27
GGPS1-202ENST00000358966 CASKIN2Q8WXE0 1202 aa13.36□□□□□ -0.27
GGPS1-202ENST00000358966 HEMGNQ9BXL5 484 aa13.36□□□□□ -0.27
GGPS1-202ENST00000358966 CARD9Q9H257 536 aa13.36□□□□□ -0.27
GGPS1-202ENST00000358966 PCDH10Q9P2E7 1040 aa13.36□□□□□ -0.27
GGPS1-202ENST00000358966 ITGA11Q9UKX5 1188 aa13.36□□□□□ -0.27
GGPS1-202ENST00000358966 TARSL2A2RTX5 802 aaKnown RBP13.35□□□□□ -0.27
GGPS1-202ENST00000358966 PI4K2BG5E9Z4 385 aa13.35□□□□□ -0.27
GGPS1-202ENST00000358966 MICAL2O94851 1124 aa13.35□□□□□ -0.27
GGPS1-202ENST00000358966 CTNNA1P35221 906 aaKnown RBP13.35□□□□□ -0.27
GGPS1-202ENST00000358966 MLH1P40692 756 aa13.35□□□□□ -0.27
GGPS1-202ENST00000358966 KCNJ1P48048 391 aa13.35□□□□□ -0.27
GGPS1-202ENST00000358966 RGS7P49802 495 aa13.35□□□□□ -0.27
GGPS1-202ENST00000358966 RAB27AP51159 221 aa13.35□□□□□ -0.27
GGPS1-202ENST00000358966 FAM182AQ5T1J6 154 aa13.35□□□□□ -0.27
GGPS1-202ENST00000358966 CEP57Q86XR8 500 aa13.35□□□□□ -0.27
GGPS1-202ENST00000358966 SPDYE1Q8NFV5 336 aaPredicted RBP13.35□□□□□ -0.27
GGPS1-202ENST00000358966 JOSD2Q8TAC2 188 aa13.35□□□□□ -0.27
GGPS1-202ENST00000358966 RIN2Q8WYP3 895 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms