RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 MCAMP43121 646 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 IREB2P48200 963 aaKnown RBP6.32□□□□□ -1.4
VPS13B-203ENST00000358544 VAMP7P51809 220 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 BFSP2Q13515 415 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 MTHFD1LQ6UB35 978 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 HDDC2Q7Z4H3 204 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 AMIGO2Q86SJ2 522 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 KBTBD2Q8IY47 623 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 L3MBTL3Q96JM7 780 aaPredicted RBP6.32□□□□□ -1.4
VPS13B-203ENST00000358544 PHF20Q9BVI0 1012 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 DHX36Q9H2U1 1008 aaKnown RBP6.32□□□□□ -1.4
VPS13B-203ENST00000358544 KMT5AQ9NQR1 393 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 PDXKO00764 312 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 H2AFYO75367 372 aaKnown RBP6.32□□□□□ -1.4
VPS13B-203ENST00000358544 IFNEQ86WN2 208 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 C1orf131Q8NDD1 294 aaKnown RBP6.32□□□□□ -1.4
VPS13B-203ENST00000358544 MSTO1Q9BUK6 570 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 CHID1Q9BWS9 393 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 SEMA6AQ9H2E6 1030 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 SHOC2Q9UQ13 582 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 NAALADL1Q9UQQ1 740 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 ERBB3P21860 1342 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 LYNP07948 512 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 DLG4P78352 724 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 LIN52Q52LA3 116 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 RNF19BQ6ZMZ0 732 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 FAR2Q96K12 515 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 MED10Q9BTT4 135 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 CDC42EP4Q9H3Q1 356 aaKnown RBP6.32□□□□□ -1.4
VPS13B-203ENST00000358544 MAGED2Q9UNF1 606 aaPredicted RBP6.32□□□□□ -1.4
VPS13B-203ENST00000358544 TMED5Q9Y3A6 229 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 CKAP5Q14008 2032 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 UTYO14607 1347 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 ABCB11O95342 1321 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 NBPF26B4DH59 902 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 SLC26A4O43511 780 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 EIF3EP60228 445 aaKnown RBP6.32□□□□□ -1.4
VPS13B-203ENST00000358544 PSMC6P62333 389 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 LRRC47Q8N1G4 583 aaKnown RBP6.32□□□□□ -1.4
VPS13B-203ENST00000358544 NBPF15Q8N660 670 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 ZNF75CPQ92670 426 aaPredicted RBP6.32□□□□□ -1.4
VPS13B-203ENST00000358544 HSPBP1Q9NZL4 362 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 RAD23AP54725 363 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 ST3GAL1Q11201 340 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 TMEM53Q6P2H8 277 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 PDXDC2PQ6P474 469 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 SFRP1Q8N474 314 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 FAM13CQ8NE31 585 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 KCTD14Q9BQ13 255 aaPredicted RBP6.32□□□□□ -1.4
VPS13B-203ENST00000358544 FANCEQ9HB96 536 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 MBD2Q9UBB5 411 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 A0A0U1RQJ8 604 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 LRRIQ4A6NIV6 560 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 TRIM64CA6NLI5 447 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 BTN3A3O00478 584 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 TBC1D12O60347 775 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 MAPK10P53779 464 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 QPCTQ16769 361 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 PDCD4Q53EL6 469 aaKnown RBP6.32□□□□□ -1.4
VPS13B-203ENST00000358544 C3orf62Q6ZUJ4 267 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 FBXO25Q8TCJ0 367 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 HPS1Q92902 700 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 SPATA16Q9BXB7 569 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 NYXQ9GZU5 481 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 ARMCX1Q9P291 453 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 AP4B1Q9Y6B7 739 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 HEATR9A2RTY3 570 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 NOTOA8MTQ0 251 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 LZTS3O60299 673 aaPredicted RBP6.32□□□□□ -1.4
VPS13B-203ENST00000358544 HADHAP40939 763 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 ILDR1Q86SU0 546 aaPredicted RBP6.32□□□□□ -1.4
VPS13B-203ENST00000358544 RYBPQ8N488 228 aaPredicted RBP6.32□□□□□ -1.4
VPS13B-203ENST00000358544 SENP7Q9BQF6 1050 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 ILKAPQ9H0C8 392 aaPredicted RBP6.32□□□□□ -1.4
VPS13B-203ENST00000358544 DCDC2Q9UHG0 476 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 SLC12A4Q9UP95 1085 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 ALOX12P18054 663 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 MAGEA8P43361 318 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 FMO5P49326 533 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 COG2Q14746 738 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 NDUFAF2Q8N183 169 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 PTPRN2Q92932 1015 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 SETDB2Q96T68 719 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 PAGR1Q9BTK6 254 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 TBCCD1Q9NVR7 557 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 RBMX2Q9Y388 322 aaKnown RBP6.32□□□□□ -1.4
VPS13B-203ENST00000358544 AP3B1O00203 1094 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 TUBA4AP68366 448 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 ZNF846Q147U1 533 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 TAB1Q15750 504 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 PKN2Q16513 984 aaKnown RBP6.32□□□□□ -1.4
VPS13B-203ENST00000358544 GIPC3Q8TF64 312 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 KCNK4Q9NYG8 393 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 GTF3C4Q9UKN8 822 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 E2F8A0AVK6 867 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 BAIAP3O94812 1187 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 RPL10AP62906 217 aaKnown RBP6.32□□□□□ -1.4
VPS13B-203ENST00000358544 DPYSQ14117 519 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 ITPRIPL1Q6GPH6 555 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 PPP1R18Q6NYC8 613 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms