RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 MYH7P12883 1935 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 SDR42E2A6NKP2 422 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 CRCPO75575 148 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 NFKBIAP25963 317 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 SERPINB1P30740 379 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 PACS1Q6VY07 963 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 ASRGL1Q7L266 308 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 CNTD1Q8N815 330 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 OSBPL6Q9BZF3 934 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 PLEKHA5Q9HAU0 1116 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 MEIS1O00470 390 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 RARBP10826 455 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 CEP55Q53EZ4 464 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 TTC33Q6PID6 262 aaPredicted RBP4.29□□□□□ -1.72
SYNE2-204ENST00000358025 LCORLQ8N3X6 602 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 PABPN1LA6NDY0 278 aaKnown RBP4.29□□□□□ -1.72
SYNE2-204ENST00000358025 UAP1Q16222 522 aaPredicted RBP4.29□□□□□ -1.72
SYNE2-204ENST00000358025 SYDE2Q5VT97 1194 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 HAUS6Q7Z4H7 955 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 PRPF39Q86UA1 669 aaKnown RBP4.29□□□□□ -1.72
SYNE2-204ENST00000358025 ART4Q93070 314 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 CNOT8Q9UFF9 292 aaKnown RBP4.29□□□□□ -1.72
SYNE2-204ENST00000358025 DBR1Q9UK59 544 aaKnown RBP4.29□□□□□ -1.72
SYNE2-204ENST00000358025 PSMD13Q9UNM6 376 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 CHADO15335 359 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 FOXN1O15353 648 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 PLA2G6O60733 806 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 RFTN1Q14699 578 aaPredicted RBP4.29□□□□□ -1.72
SYNE2-204ENST00000358025 LRRC24Q50LG9 513 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 EFHC1Q5JVL4 640 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 ZBTB49Q6ZSB9 765 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 LRRC49Q8IUZ0 686 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 ZNF333Q96JL9 665 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 RTKNQ9BST9 563 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 PHTF1Q9UMS5 762 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 MYH3P11055 1940 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 APRTP07741 180 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 PDHBP11177 359 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 GNAZP19086 355 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 MROH9Q5TGP6 573 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 C4orf50Q6ZRC1 276 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 STAMQ92783 540 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 C2orf40Q9H1Z8 148 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 FOXR1Q6PIV2 292 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 FBXL13Q8NEE6 735 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 FAF2Q96CS3 445 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 EIF2AK1Q9BQI3 630 aaKnown RBP4.29□□□□□ -1.72
SYNE2-204ENST00000358025 ASPSCR1Q9BZE9 553 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 SEPT9Q9UHD8 586 aaPredicted RBP4.29□□□□□ -1.72
SYNE2-204ENST00000358025 SYCE1LA8MT33 242 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 MRPS14O60783 128 aaKnown RBP4.29□□□□□ -1.72
SYNE2-204ENST00000358025 NTRK1P04629 796 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 CD44P16070 742 aaKnown RBP4.29□□□□□ -1.72
SYNE2-204ENST00000358025 CYP11B2P19099 503 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 SLC12A3P55017 1021 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 AUHQ13825 339 aaKnown RBP4.29□□□□□ -1.72
SYNE2-204ENST00000358025 IZUMO3Q5VZ72 239 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 SVOPQ8N4V2 548 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 FLAD1Q8NFF5 587 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 CEP70Q8NHQ1 597 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 C17orf50Q8WW18 174 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 EME1Q96AY2 570 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 SPATA16Q9BXB7 569 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 RAD54BQ9Y620 910 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 GSC2O15499 205 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 GLRA3O75311 464 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 NCF2P19878 526 aaPredicted RBP4.29□□□□□ -1.72
SYNE2-204ENST00000358025 RXRGP48443 463 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 TRAP1Q12931 704 aaKnown RBP4.29□□□□□ -1.72
SYNE2-204ENST00000358025 GRB10Q13322 594 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 RGS21Q2M5E4 152 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 OR6Y1Q8NGX8 325 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 SPATA18Q8TC71 538 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 MAML1Q92585 1016 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 RIOX1Q9H6W3 641 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 SLC38A10Q9HBR0 1119 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 DDX18Q9NVP1 670 aaKnown RBP4.29□□□□□ -1.72
SYNE2-204ENST00000358025 DDX43Q9NXZ2 648 aaKnown RBP4.29□□□□□ -1.72
SYNE2-204ENST00000358025 CLEC11AQ9Y240 323 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 ARL4AP40617 200 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 DUOXA2Q1HG44 320 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 DEPDC1BQ8WUY9 529 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 KAZALD1Q96I82 304 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 ERI2A8K979 691 aaKnown RBP4.29□□□□□ -1.72
SYNE2-204ENST00000358025 VWA5AO00534 786 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 AP1G1O43747 822 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 RARAP10276 462 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 SP100P23497 879 aaPredicted RBP4.29□□□□□ -1.72
SYNE2-204ENST00000358025 EIF4BP23588 611 aaKnown RBP4.29□□□□□ -1.72
SYNE2-204ENST00000358025 QARSP47897 775 aaKnown RBP4.29□□□□□ -1.72
SYNE2-204ENST00000358025 GPC3P51654 580 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 RAB25P57735 213 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 PTK6Q13882 451 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 ARHGAP44Q17R89 818 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 TRIM50Q86XT4 487 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 SUPT20HQ8NEM7 779 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 ACTRT2Q8TDY3 377 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 SPIRE2Q8WWL2 714 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 TXLNGYQ9BZA5 131 aa4.29□□□□□ -1.72
SYNE2-204ENST00000358025 STAT3P40763 770 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms