RNA–Protein interactions for RNA: ENST00000357276.8

SMARCAL1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SMARCAL1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-201ENST00000357276 KLHL23Q8NBE8 558 aa12.72□□□□□ -0.37
SMARCAL1-201ENST00000357276 RBM15BQ8NDT2 890 aaKnown RBP12.72□□□□□ -0.37
SMARCAL1-201ENST00000357276 RBM17Q96I25 401 aaKnown RBP12.72□□□□□ -0.37
SMARCAL1-201ENST00000357276 NT5C1BQ96P26 610 aa12.72□□□□□ -0.37
SMARCAL1-201ENST00000357276 SLITRK1Q96PX8 696 aa12.72□□□□□ -0.37
SMARCAL1-201ENST00000357276 LXNQ9BS40 222 aa12.72□□□□□ -0.37
SMARCAL1-201ENST00000357276 C1orf21Q9H246 121 aa12.72□□□□□ -0.37
SMARCAL1-201ENST00000357276 PPME1Q9Y570 386 aa12.72□□□□□ -0.37
SMARCAL1-201ENST00000357276 SPATA31D3P0C874 917 aa12.72□□□□□ -0.37
SMARCAL1-201ENST00000357276 TAL1P17542 331 aaPredicted RBP12.72□□□□□ -0.37
SMARCAL1-201ENST00000357276 GRIA2P42262 883 aa12.72□□□□□ -0.37
SMARCAL1-201ENST00000357276 NOP14P78316 857 aaKnown RBP12.72□□□□□ -0.37
SMARCAL1-201ENST00000357276 MAMLD1Q13495 774 aa12.72□□□□□ -0.37
SMARCAL1-201ENST00000357276 TFDP1Q14186 410 aa12.72□□□□□ -0.37
SMARCAL1-201ENST00000357276 MYBPC3Q14896 1274 aa12.72□□□□□ -0.37
SMARCAL1-201ENST00000357276 ARMC3Q5W041 872 aa12.72□□□□□ -0.37
SMARCAL1-201ENST00000357276 PLEKHA7Q6IQ23 1121 aa12.72□□□□□ -0.37
SMARCAL1-201ENST00000357276 PADI6Q6TGC4 694 aa12.72□□□□□ -0.37
SMARCAL1-201ENST00000357276 SPATA31D4Q6ZUB0 917 aa12.72□□□□□ -0.37
SMARCAL1-201ENST00000357276 ENOSF1Q7L5Y1 443 aa12.72□□□□□ -0.37
SMARCAL1-201ENST00000357276 LCA5Q86VQ0 697 aa12.72□□□□□ -0.37
SMARCAL1-201ENST00000357276 SCUBE1Q8IWY4 988 aa12.72□□□□□ -0.37
SMARCAL1-201ENST00000357276 FBXL13Q8NEE6 735 aa12.72□□□□□ -0.37
SMARCAL1-201ENST00000357276 TAS1R2Q8TE23 839 aa12.72□□□□□ -0.37
SMARCAL1-201ENST00000357276 CAMKK2Q96RR4 588 aa12.72□□□□□ -0.37
SMARCAL1-201ENST00000357276 WDR11Q9BZH6 1224 aa12.72□□□□□ -0.37
SMARCAL1-201ENST00000357276 PCDH9Q9HC56 1237 aa12.72□□□□□ -0.37
SMARCAL1-201ENST00000357276 KCNQ5Q9NR82 932 aa12.72□□□□□ -0.37
SMARCAL1-201ENST00000357276 RAB20Q9NX57 234 aa12.72□□□□□ -0.37
SMARCAL1-201ENST00000357276 CHCHD3Q9NX63 227 aaKnown RBP12.72□□□□□ -0.37
SMARCAL1-201ENST00000357276 SLC7A8Q9UHI5 535 aa12.72□□□□□ -0.37
SMARCAL1-201ENST00000357276 SNCAIPQ9Y6H5 919 aa12.72□□□□□ -0.37
SMARCAL1-201ENST00000357276 ARHGEF35A5YM69 484 aa12.71□□□□□ -0.37
SMARCAL1-201ENST00000357276 AP1G1O43747 822 aa12.71□□□□□ -0.37
SMARCAL1-201ENST00000357276 ATP9BO43861 1147 aa12.71□□□□□ -0.37
SMARCAL1-201ENST00000357276 CALCAP01258 141 aa12.71□□□□□ -0.37
SMARCAL1-201ENST00000357276 SLURP2P0DP57 97 aa12.71□□□□□ -0.37
SMARCAL1-201ENST00000357276 MYL2P10916 166 aa12.71□□□□□ -0.37
SMARCAL1-201ENST00000357276 IMPDH2P12268 514 aa12.71□□□□□ -0.37
SMARCAL1-201ENST00000357276 TSHRP16473 764 aa12.71□□□□□ -0.37
SMARCAL1-201ENST00000357276 CD58P19256 250 aa12.71□□□□□ -0.37
SMARCAL1-201ENST00000357276 GTF2H1P32780 548 aa12.71□□□□□ -0.37
SMARCAL1-201ENST00000357276 AP2B1P63010 937 aa12.71□□□□□ -0.37
SMARCAL1-201ENST00000357276 SHROOM1Q2M3G4 852 aaPredicted RBP12.71□□□□□ -0.37
SMARCAL1-201ENST00000357276 KLHL38Q2WGJ6 581 aa12.71□□□□□ -0.37
SMARCAL1-201ENST00000357276 CBWD2Q8IUF1 395 aa12.71□□□□□ -0.37
SMARCAL1-201ENST00000357276 ULK2Q8IYT8 1036 aa12.71□□□□□ -0.37
SMARCAL1-201ENST00000357276 RCOR2Q8IZ40 523 aa12.71□□□□□ -0.37
SMARCAL1-201ENST00000357276 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.71□□□□□ -0.37
SMARCAL1-201ENST00000357276 NAT14Q8WUY8 206 aa12.71□□□□□ -0.37
SMARCAL1-201ENST00000357276 CPA5Q8WXQ8 436 aa12.71□□□□□ -0.37
SMARCAL1-201ENST00000357276 FAM161BQ96MY7 647 aa12.71□□□□□ -0.37
SMARCAL1-201ENST00000357276 ADAM33Q9BZ11 813 aa12.71□□□□□ -0.37
SMARCAL1-201ENST00000357276 MIS12Q9H081 205 aa12.71□□□□□ -0.37
SMARCAL1-201ENST00000357276 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.71□□□□□ -0.37
SMARCAL1-201ENST00000357276 KCNK4Q9NYG8 393 aa12.71□□□□□ -0.37
SMARCAL1-201ENST00000357276 PPM1HQ9ULR3 514 aa12.71□□□□□ -0.37
SMARCAL1-201ENST00000357276 B2RBV5 119 aa12.71□□□□□ -0.38
SMARCAL1-201ENST00000357276 E5RJQ4 531 aa12.71□□□□□ -0.38
SMARCAL1-201ENST00000357276 GAS7O60861 476 aa12.71□□□□□ -0.38
SMARCAL1-201ENST00000357276 BBOX1O75936 387 aa12.71□□□□□ -0.38
SMARCAL1-201ENST00000357276 VCPP55072 806 aaKnown RBP12.71□□□□□ -0.38
SMARCAL1-201ENST00000357276 ENPEPQ07075 957 aa12.71□□□□□ -0.38
SMARCAL1-201ENST00000357276 SNRNP35Q16560 246 aaKnown RBP12.71□□□□□ -0.38
SMARCAL1-201ENST00000357276 MSS51Q4VC12 460 aa12.71□□□□□ -0.38
SMARCAL1-201ENST00000357276 CIAPIN1Q6FI81 312 aa12.71□□□□□ -0.38
SMARCAL1-201ENST00000357276 AAGABQ6PD74 315 aa12.71□□□□□ -0.38
SMARCAL1-201ENST00000357276 RBM12BQ8IXT5 1001 aaKnown RBP12.71□□□□□ -0.38
SMARCAL1-201ENST00000357276 TMC2Q8TDI7 906 aa12.71□□□□□ -0.38
SMARCAL1-201ENST00000357276 VCPIP1Q96JH7 1222 aa12.71□□□□□ -0.38
SMARCAL1-201ENST00000357276 MFSD14AQ96MC6 490 aa12.71□□□□□ -0.38
SMARCAL1-201ENST00000357276 FBXL18Q96ME1 805 aa12.71□□□□□ -0.38
SMARCAL1-201ENST00000357276 NDE1Q9NXR1 346 aa12.71□□□□□ -0.38
SMARCAL1-201ENST00000357276 C2orf71A6NGG8 1288 aa12.7□□□□□ -0.38
SMARCAL1-201ENST00000357276 ATP2A1O14983 1001 aa12.7□□□□□ -0.38
SMARCAL1-201ENST00000357276 BANF1O75531 89 aa12.7□□□□□ -0.38
SMARCAL1-201ENST00000357276 SSTR1P30872 391 aa12.7□□□□□ -0.38
SMARCAL1-201ENST00000357276 PHBP35232 272 aa12.7□□□□□ -0.38
SMARCAL1-201ENST00000357276 RPL26P61254 145 aaKnown RBP12.7□□□□□ -0.38
SMARCAL1-201ENST00000357276 HIF1AQ16665 826 aa12.7□□□□□ -0.38
SMARCAL1-201ENST00000357276 ATP11CQ8NB49 1132 aa12.7□□□□□ -0.38
SMARCAL1-201ENST00000357276 APOPT1Q96IL0 206 aa12.7□□□□□ -0.38
SMARCAL1-201ENST00000357276 EBF3Q9H4W6 596 aa12.7□□□□□ -0.38
SMARCAL1-201ENST00000357276 GGA1Q9UJY5 639 aa12.7□□□□□ -0.38
SMARCAL1-201ENST00000357276 GMEB1Q9Y692 573 aa12.7□□□□□ -0.38
SMARCAL1-201ENST00000357276 ZC3H11AO75152 810 aaKnown RBP eCLIP12.7□□□□□ -0.38
SMARCAL1-201ENST00000357276 FKBP6O75344 327 aa12.7□□□□□ -0.38
SMARCAL1-201ENST00000357276 CSDE1O75534 798 aaKnown RBP12.7□□□□□ -0.38
SMARCAL1-201ENST00000357276 DSG3P32926 999 aa12.7□□□□□ -0.38
SMARCAL1-201ENST00000357276 NCKAP1LP55160 1127 aa12.7□□□□□ -0.38
SMARCAL1-201ENST00000357276 ZBTB16Q05516 673 aa12.7□□□□□ -0.38
SMARCAL1-201ENST00000357276 CAPN12Q6ZSI9 719 aa12.7□□□□□ -0.38
SMARCAL1-201ENST00000357276 ALYREFQ86V81 257 aaKnown RBP12.7□□□□□ -0.38
SMARCAL1-201ENST00000357276 NAT8LQ8N9F0 302 aa12.7□□□□□ -0.38
SMARCAL1-201ENST00000357276 FAM172AQ8WUF8 416 aa12.7□□□□□ -0.38
SMARCAL1-201ENST00000357276 CCDC106Q9BWC9 280 aa12.7□□□□□ -0.38
SMARCAL1-201ENST00000357276 ARMCX1Q9P291 453 aa12.7□□□□□ -0.38
SMARCAL1-201ENST00000357276 HSFX1Q9UBD0 423 aa12.7□□□□□ -0.38
SMARCAL1-201ENST00000357276 ZNF148Q9UQR1 794 aa12.7□□□□□ -0.38
SMARCAL1-201ENST00000357276 PCDHB2Q9Y5E7 798 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms