RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 AGBL1Q96MI9 1066 aa16.26■□□□□ 0.19
TRAPPC11-202ENST00000357207 TMEM120AQ9BXJ8 343 aa16.26■□□□□ 0.19
TRAPPC11-202ENST00000357207 DIP2AQ14689 1571 aa16.26■□□□□ 0.19
TRAPPC11-202ENST00000357207 C16orf96A6NNT2 1141 aa16.26■□□□□ 0.19
TRAPPC11-202ENST00000357207 KRT16P08779 473 aa16.26■□□□□ 0.19
TRAPPC11-202ENST00000357207 NUDT2P50583 147 aa16.26■□□□□ 0.19
TRAPPC11-202ENST00000357207 HMGCS2P54868 508 aa16.26■□□□□ 0.19
TRAPPC11-202ENST00000357207 TRMT5Q32P41 509 aaKnown RBP16.26■□□□□ 0.19
TRAPPC11-202ENST00000357207 COBLL1Q53SF7 1204 aa16.26■□□□□ 0.19
TRAPPC11-202ENST00000357207 KCNT1Q5JUK3 1230 aa16.26■□□□□ 0.19
TRAPPC11-202ENST00000357207 SLC26A11Q86WA9 606 aa16.26■□□□□ 0.19
TRAPPC11-202ENST00000357207 TMC2Q8TDI7 906 aa16.26■□□□□ 0.19
TRAPPC11-202ENST00000357207 CENPTQ96BT3 561 aa16.26■□□□□ 0.19
TRAPPC11-202ENST00000357207 LRCH1Q9Y2L9 728 aa16.26■□□□□ 0.19
TRAPPC11-202ENST00000357207 PIK3CDO00329 1044 aa16.26■□□□□ 0.19
TRAPPC11-202ENST00000357207 ZBTB39O15060 712 aa16.26■□□□□ 0.19
TRAPPC11-202ENST00000357207 TM9SF1O15321 606 aa16.26■□□□□ 0.19
TRAPPC11-202ENST00000357207 KLRC4O43908 158 aa16.26■□□□□ 0.19
TRAPPC11-202ENST00000357207 GLRA3O75311 464 aa16.26■□□□□ 0.19
TRAPPC11-202ENST00000357207 FKBP6O75344 327 aa16.26■□□□□ 0.19
TRAPPC11-202ENST00000357207 SULT1E1P49888 294 aa16.26■□□□□ 0.19
TRAPPC11-202ENST00000357207 TMEM132DQ14C87 1099 aa16.26■□□□□ 0.19
TRAPPC11-202ENST00000357207 TMEM119Q4V9L6 283 aa16.26■□□□□ 0.19
TRAPPC11-202ENST00000357207 SV2AQ7L0J3 742 aa16.26■□□□□ 0.19
TRAPPC11-202ENST00000357207 TEX2Q8IWB9 1127 aa16.26■□□□□ 0.19
TRAPPC11-202ENST00000357207 PPHLN1Q8NEY8 458 aaKnown RBP16.26■□□□□ 0.19
TRAPPC11-202ENST00000357207 ILKAPQ9H0C8 392 aaPredicted RBP16.26■□□□□ 0.19
TRAPPC11-202ENST00000357207 ABCF3Q9NUQ8 709 aa16.26■□□□□ 0.19
TRAPPC11-202ENST00000357207 UBA3Q8TBC4 463 aa16.25■□□□□ 0.19
TRAPPC11-202ENST00000357207 ACTL9Q8TC94 416 aa16.25■□□□□ 0.19
TRAPPC11-202ENST00000357207 E5RI56 91 aa16.25■□□□□ 0.19
TRAPPC11-202ENST00000357207 H0Y626 953 aa16.25■□□□□ 0.19
TRAPPC11-202ENST00000357207 EPHB6O15197 1021 aa16.25■□□□□ 0.19
TRAPPC11-202ENST00000357207 SNX3O60493 162 aa16.25■□□□□ 0.19
TRAPPC11-202ENST00000357207 TRIM16O95361 564 aa16.25■□□□□ 0.19
TRAPPC11-202ENST00000357207 ARP10275 920 aa16.25■□□□□ 0.19
TRAPPC11-202ENST00000357207 PREPLQ4J6C6 727 aaPredicted RBP16.25■□□□□ 0.19
TRAPPC11-202ENST00000357207 IZUMO2Q6UXV1 221 aa16.25■□□□□ 0.19
TRAPPC11-202ENST00000357207 KDELC2Q7Z4H8 507 aa16.25■□□□□ 0.19
TRAPPC11-202ENST00000357207 RDM1Q8NG50 284 aa16.25■□□□□ 0.19
TRAPPC11-202ENST00000357207 PLEKHA5Q9HAU0 1116 aa16.25■□□□□ 0.19
TRAPPC11-202ENST00000357207 SP110Q9HB58 689 aa16.25■□□□□ 0.19
TRAPPC11-202ENST00000357207 DIP2CQ9Y2E4 1556 aa16.25■□□□□ 0.19
TRAPPC11-202ENST00000357207 DFFAO00273 331 aa16.25■□□□□ 0.19
TRAPPC11-202ENST00000357207 ATP9AO75110 1047 aa16.25■□□□□ 0.19
TRAPPC11-202ENST00000357207 RFC5P40937 340 aa16.25■□□□□ 0.19
TRAPPC11-202ENST00000357207 TSPY1Q01534 308 aa16.25■□□□□ 0.19
TRAPPC11-202ENST00000357207 TXNRD3Q86VQ6 643 aa16.25■□□□□ 0.19
TRAPPC11-202ENST00000357207 NUP93Q8N1F7 819 aa16.25■□□□□ 0.19
TRAPPC11-202ENST00000357207 SHOC2Q9UQ13 582 aa16.25■□□□□ 0.19
TRAPPC11-202ENST00000357207 PCDHA3Q9Y5H8 950 aa16.25■□□□□ 0.19
TRAPPC11-202ENST00000357207 PSMD3O43242 534 aa16.25■□□□□ 0.19
TRAPPC11-202ENST00000357207 PAX7P23759 505 aa16.25■□□□□ 0.19
TRAPPC11-202ENST00000357207 PRKCIP41743 596 aa16.25■□□□□ 0.19
TRAPPC11-202ENST00000357207 HSPA13P48723 471 aa16.25■□□□□ 0.19
TRAPPC11-202ENST00000357207 CACNA2D1P54289 1103 aa16.25■□□□□ 0.19
TRAPPC11-202ENST00000357207 MTMR2Q13614 643 aa16.25■□□□□ 0.19
TRAPPC11-202ENST00000357207 ERMARDQ5T6L9 678 aa16.25■□□□□ 0.19
TRAPPC11-202ENST00000357207 SPOCD1Q6ZMY3 1216 aa16.25■□□□□ 0.19
TRAPPC11-202ENST00000357207 KCNK18Q7Z418 384 aa16.25■□□□□ 0.19
TRAPPC11-202ENST00000357207 LINC00116Q8NCU8 138 aa16.25■□□□□ 0.19
TRAPPC11-202ENST00000357207 DACH2Q96NX9 599 aa16.25■□□□□ 0.19
TRAPPC11-202ENST00000357207 MED15Q96RN5 788 aa16.25■□□□□ 0.19
TRAPPC11-202ENST00000357207 POP1Q99575 1024 aaKnown RBP16.25■□□□□ 0.19
TRAPPC11-202ENST00000357207 DCLK3Q9C098 648 aa16.25■□□□□ 0.19
TRAPPC11-202ENST00000357207 FAM49BQ9NUQ9 324 aa16.25■□□□□ 0.19
TRAPPC11-202ENST00000357207 KDM1AO60341 852 aa16.24■□□□□ 0.19
TRAPPC11-202ENST00000357207 SRP72O76094 671 aaKnown RBP16.24■□□□□ 0.19
TRAPPC11-202ENST00000357207 NPTX2P47972 431 aa16.24■□□□□ 0.19
TRAPPC11-202ENST00000357207 SERPINB10P48595 397 aa16.24■□□□□ 0.19
TRAPPC11-202ENST00000357207 MIIPQ5JXC2 388 aa16.24■□□□□ 0.19
TRAPPC11-202ENST00000357207 SPATA20Q8TB22 786 aa16.24■□□□□ 0.19
TRAPPC11-202ENST00000357207 CYGBQ8WWM9 190 aa16.24■□□□□ 0.19
TRAPPC11-202ENST00000357207 TAGLN3Q9UI15 199 aa16.24■□□□□ 0.19
TRAPPC11-202ENST00000357207 ZNF229Q9UJW7 825 aa16.24■□□□□ 0.19
TRAPPC11-202ENST00000357207 SLC39A10Q9ULF5 831 aa16.24■□□□□ 0.19
TRAPPC11-202ENST00000357207 DEAF1O75398 565 aaPredicted RBP16.24■□□□□ 0.19
TRAPPC11-202ENST00000357207 THRAP10827 490 aa16.24■□□□□ 0.19
TRAPPC11-202ENST00000357207 BGNP21810 368 aa16.24■□□□□ 0.19
TRAPPC11-202ENST00000357207 GARTP22102 1010 aa16.24■□□□□ 0.19
TRAPPC11-202ENST00000357207 HADHAP40939 763 aa16.24■□□□□ 0.19
TRAPPC11-202ENST00000357207 RPS6P62753 249 aaKnown RBP16.24■□□□□ 0.19
TRAPPC11-202ENST00000357207 Q4G0T1 1027 aa16.24■□□□□ 0.19
TRAPPC11-202ENST00000357207 KIAA1841Q6NSI8 718 aa16.24■□□□□ 0.19
TRAPPC11-202ENST00000357207 LAYNQ6UX15 382 aa16.24■□□□□ 0.19
TRAPPC11-202ENST00000357207 FAM151AQ8WW52 585 aa16.24■□□□□ 0.19
TRAPPC11-202ENST00000357207 TSPAN17Q96FV3 270 aa16.24■□□□□ 0.19
TRAPPC11-202ENST00000357207 EGFL8Q99944 293 aa16.24■□□□□ 0.19
TRAPPC11-202ENST00000357207 FBXO28Q9NVF7 368 aa16.24■□□□□ 0.19
TRAPPC11-202ENST00000357207 ARHGEF38Q9NXL2 777 aa16.24■□□□□ 0.19
TRAPPC11-202ENST00000357207 NINJ2Q9NZG7 142 aa16.24■□□□□ 0.19
TRAPPC11-202ENST00000357207 IL1RAPL1Q9NZN1 696 aa16.24■□□□□ 0.19
TRAPPC11-202ENST00000357207 BLOC1S6Q9UL45 172 aa16.24■□□□□ 0.19
TRAPPC11-202ENST00000357207 REXO2Q9Y3B8 237 aaKnown RBP16.24■□□□□ 0.19
TRAPPC11-202ENST00000357207 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.24■□□□□ 0.19
TRAPPC11-202ENST00000357207 PBX1P40424 430 aa16.24■□□□□ 0.19
TRAPPC11-202ENST00000357207 DAB2P98082 770 aa16.24■□□□□ 0.19
TRAPPC11-202ENST00000357207 STX5Q13190 355 aa16.24■□□□□ 0.19
TRAPPC11-202ENST00000357207 CLEC16AQ2KHT3 1053 aa16.24■□□□□ 0.19
TRAPPC11-202ENST00000357207 C6orf10Q5SRN2 563 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms