RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 PRKAA1Q13131 559 aa6.84□□□□□ -1.32
VPS13B-202ENST00000357162 MMRN1Q13201 1228 aa6.84□□□□□ -1.32
VPS13B-202ENST00000357162 ZNF394Q53GI3 561 aa6.84□□□□□ -1.32
VPS13B-202ENST00000357162 AGAP9Q5VTM2 703 aa6.84□□□□□ -1.32
VPS13B-202ENST00000357162 SEL1L3Q68CR1 1132 aa6.84□□□□□ -1.32
VPS13B-202ENST00000357162 ADAT2Q7Z6V5 191 aaKnown RBP6.84□□□□□ -1.32
VPS13B-202ENST00000357162 SLC38A7Q9NVC3 462 aa6.84□□□□□ -1.32
VPS13B-202ENST00000357162 IMPAD1Q9NX62 359 aa6.84□□□□□ -1.32
VPS13B-202ENST00000357162 FETUBQ9UGM5 382 aa6.84□□□□□ -1.32
VPS13B-202ENST00000357162 TULP4Q9NRJ4 1543 aa6.84□□□□□ -1.32
VPS13B-202ENST00000357162 M0R2C6 588 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 FESP07332 822 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 IL12RB1P42701 662 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 PIK3CGP48736 1102 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 KCNK10P57789 538 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 STK4Q13043 487 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 EIF2B5Q13144 721 aaKnown RBP6.83□□□□□ -1.32
VPS13B-202ENST00000357162 ANKRD13AQ8IZ07 590 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 FHDC1Q9C0D6 1143 aaPredicted RBP6.83□□□□□ -1.32
VPS13B-202ENST00000357162 NAGPAQ9UK23 515 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 CCDC88AQ3V6T2 1871 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 SFI1A8K8P3 1242 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 B2RBV5 119 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 MAPTP10636 758 aaKnown RBP6.83□□□□□ -1.32
VPS13B-202ENST00000357162 NPR1P16066 1061 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 ETFBP38117 255 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 CCNG2Q16589 344 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 LRRC74BQ6ZQY2 392 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 TNIP3Q96KP6 325 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 SLC25A23Q9BV35 468 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 PRKD2Q9BZL6 878 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 GOLPH3Q9H4A6 298 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.83□□□□□ -1.322e-6■■■■■ 35.9
VPS13B-202ENST00000357162 NOD1Q9Y239 953 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 ARHGEF17Q96PE2 2063 aaPredicted RBP6.83□□□□□ -1.32
VPS13B-202ENST00000357162 CENPXA8MT69 81 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 NPTXRO95502 500 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 MAD2L1Q13257 205 aaPredicted RBP6.83□□□□□ -1.32
VPS13B-202ENST00000357162 NAPEPLDQ6IQ20 393 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 BORCS5Q969J3 196 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 DOCK10Q96BY6 2186 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 RECQL5O94762 991 aaPredicted RBP6.83□□□□□ -1.32
VPS13B-202ENST00000357162 FBXO31Q5XUX0 539 aaPredicted RBP6.83□□□□□ -1.32
VPS13B-202ENST00000357162 TPCN2Q8NHX9 752 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 CYGBQ8WWM9 190 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 GPAMQ9HCL2 828 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 VPS45Q9NRW7 570 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 UBAP1Q9NZ09 502 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 PRPF19Q9UMS4 504 aaKnown RBP6.83□□□□□ -1.32
VPS13B-202ENST00000357162 HPSEQ9Y251 543 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 PPLO60437 1756 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 H7C1W4 665 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 ANXA9O76027 345 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 QARSP47897 775 aaKnown RBP6.83□□□□□ -1.32
VPS13B-202ENST00000357162 ENPEPQ07075 957 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 TFDP3Q5H9I0 405 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 SNX30Q5VWJ9 437 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 UGT3A1Q6NUS8 523 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 NBPF15Q8N660 670 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 PDCD6IPQ8WUM4 868 aaKnown RBP6.83□□□□□ -1.32
VPS13B-202ENST00000357162 MLXIPQ9HAP2 919 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 ADAM28Q9UKQ2 775 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 CORO2BQ9UQ03 480 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 TPRKBQ9Y3C4 175 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 ABCC3O15438 1527 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 CASP2P42575 452 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 SLC18A1P54219 525 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 SHC4Q6S5L8 630 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 TTC30AQ86WT1 665 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 NIM1KQ8IY84 436 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 CCDC36Q8IYA8 594 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 TTC30BQ8N4P2 665 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 HEG1Q9ULI3 1381 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 PAEPP09466 180 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 TRIM65Q6PJ69 517 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 CCNYL1Q8N7R7 359 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 PPHLN1Q8NEY8 458 aaKnown RBP6.83□□□□□ -1.32
VPS13B-202ENST00000357162 OSBP2Q969R2 916 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 RUBCNLQ9H714 662 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 DYRK4Q9NR20 520 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 ERAP1Q9NZ08 941 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 PCDHGC5Q9Y5F6 944 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 ESYT3A0FGR9 886 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 PHKG2P15735 406 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 ERMARDQ5T6L9 678 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 NET1Q7Z628 596 aaPredicted RBP6.83□□□□□ -1.32
VPS13B-202ENST00000357162 UNC45BQ8IWX7 931 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 CLEC4FQ8N1N0 589 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 SNX19Q92543 992 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 HSPH1Q92598 858 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 ULK4Q96C45 1275 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 TMEM8AQ9HCN3 771 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 PTTG2Q9NZH5 202 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 POLD2P49005 469 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 SCNN1DP51172 638 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 DAB2P98082 770 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 LPAR1Q92633 364 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 MLPHQ9BV36 600 aaPredicted RBP6.83□□□□□ -1.32
VPS13B-202ENST00000357162 CD320Q9NPF0 282 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 RRN3Q9NYV6 651 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms