RNA–Protein interactions for RNA: ENST00000356660.8

BDNF-202, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,018 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-202ENST00000356660 EFTUD2Q15029 972 aaKnown RBP eCLIP13.15□□□□□ -0.3
BDNF-202ENST00000356660 CHI3L2Q15782 390 aa13.15□□□□□ -0.3
BDNF-202ENST00000356660 GALNTL6Q49A17 601 aa13.15□□□□□ -0.3
BDNF-202ENST00000356660 ETNPPLQ8TBG4 499 aa13.15□□□□□ -0.3
BDNF-202ENST00000356660 SREK1Q8WXA9 508 aaKnown RBP13.15□□□□□ -0.3
BDNF-202ENST00000356660 WWP1Q9H0M0 922 aa13.15□□□□□ -0.3
BDNF-202ENST00000356660 RNF146Q9NTX7 359 aa13.15□□□□□ -0.3
BDNF-202ENST00000356660 SEPT10Q9P0V9 454 aa13.15□□□□□ -0.3
BDNF-202ENST00000356660 HESX1Q9UBX0 185 aa13.15□□□□□ -0.3
BDNF-202ENST00000356660 POLLQ9UGP5 575 aa13.15□□□□□ -0.3
BDNF-202ENST00000356660 XPO7Q9UIA9 1087 aaKnown RBP13.15□□□□□ -0.3
BDNF-202ENST00000356660 APOBEC2Q9Y235 224 aaKnown RBP13.15□□□□□ -0.3
BDNF-202ENST00000356660 ZNF711Q9Y462 761 aa13.15□□□□□ -0.3
BDNF-202ENST00000356660 CST8O60676 142 aa13.14□□□□□ -0.31
BDNF-202ENST00000356660 QARSP47897 775 aaKnown RBP13.14□□□□□ -0.31
BDNF-202ENST00000356660 FAXCQ5TGI0 409 aa13.14□□□□□ -0.31
BDNF-202ENST00000356660 PYDC1Q8WXC3 89 aa13.14□□□□□ -0.31
BDNF-202ENST00000356660 ATP2A3Q93084 1043 aa13.14□□□□□ -0.31
BDNF-202ENST00000356660 PPP1R36Q96LQ0 422 aa13.14□□□□□ -0.31
BDNF-202ENST00000356660 GORASP1Q9BQQ3 440 aa13.14□□□□□ -0.31
BDNF-202ENST00000356660 CADM1Q9BY67 442 aaKnown RBP13.14□□□□□ -0.31
BDNF-202ENST00000356660 TXLNGYQ9BZA5 131 aa13.14□□□□□ -0.31
BDNF-202ENST00000356660 ANLNQ9NQW6 1124 aa13.14□□□□□ -0.31
BDNF-202ENST00000356660 SLC17A7Q9P2U7 560 aa13.14□□□□□ -0.31
BDNF-202ENST00000356660 SLC9A2Q9UBY0 812 aa13.14□□□□□ -0.31
BDNF-202ENST00000356660 PRR12Q9ULL5 1215 aa13.14□□□□□ -0.31
BDNF-202ENST00000356660 KIF1AQ12756 1690 aa13.14□□□□□ -0.31
BDNF-202ENST00000356660 SCN11AQ9UI33 1791 aa13.14□□□□□ -0.31
BDNF-202ENST00000356660 TRIM49D1C9J1S8 452 aa13.14□□□□□ -0.31
BDNF-202ENST00000356660 WFS1O76024 890 aa13.14□□□□□ -0.31
BDNF-202ENST00000356660 P4HBP07237 508 aaKnown RBP13.14□□□□□ -0.31
BDNF-202ENST00000356660 ACSBG2Q5FVE4 666 aa13.14□□□□□ -0.31
BDNF-202ENST00000356660 MFSD7Q6UXD7 560 aa13.14□□□□□ -0.31
BDNF-202ENST00000356660 ICA1LQ8NDH6 482 aa13.14□□□□□ -0.31
BDNF-202ENST00000356660 ZSWIM2Q8NEG5 633 aa13.14□□□□□ -0.31
BDNF-202ENST00000356660 OPTNQ96CV9 577 aa13.14□□□□□ -0.31
BDNF-202ENST00000356660 PCMTD2Q9NV79 361 aa13.14□□□□□ -0.31
BDNF-202ENST00000356660 CLIC5Q9NZA1 410 aa13.14□□□□□ -0.31
BDNF-202ENST00000356660 PCDHB2Q9Y5E7 798 aa13.14□□□□□ -0.31
BDNF-202ENST00000356660 GSC2O15499 205 aa13.14□□□□□ -0.31
BDNF-202ENST00000356660 RHBDL3P58872 404 aa13.14□□□□□ -0.31
BDNF-202ENST00000356660 MCL1Q07820 350 aa13.14□□□□□ -0.31
BDNF-202ENST00000356660 TAF12Q16514 161 aa13.14□□□□□ -0.31
BDNF-202ENST00000356660 SV2AQ7L0J3 742 aa13.14□□□□□ -0.31
BDNF-202ENST00000356660 TTC7BQ86TV6 843 aa13.14□□□□□ -0.31
BDNF-202ENST00000356660 RSPH3Q86UC2 560 aa13.14□□□□□ -0.31
BDNF-202ENST00000356660 MCOLN2Q8IZK6 566 aa13.14□□□□□ -0.31
BDNF-202ENST00000356660 DRAXINQ8NBI3 349 aaPredicted RBP13.14□□□□□ -0.31
BDNF-202ENST00000356660 Q9H521 79 aa13.14□□□□□ -0.31
BDNF-202ENST00000356660 DDX18Q9NVP1 670 aaKnown RBP13.14□□□□□ -0.31
BDNF-202ENST00000356660 IP6K2Q9UHH9 426 aa13.14□□□□□ -0.31
BDNF-202ENST00000356660 MYH1P12882 1939 aa13.13□□□□□ -0.31
BDNF-202ENST00000356660 MYH4Q9Y623 1939 aa13.13□□□□□ -0.31
BDNF-202ENST00000356660 DNALI1O14645 258 aaPredicted RBP13.13□□□□□ -0.31
BDNF-202ENST00000356660 NDC80O14777 642 aa13.13□□□□□ -0.31
BDNF-202ENST00000356660 TBX10O75333 385 aa13.13□□□□□ -0.31
BDNF-202ENST00000356660 ZNF189O75820 626 aaPredicted RBP13.13□□□□□ -0.31
BDNF-202ENST00000356660 POLR2BP30876 1174 aaKnown RBP13.13□□□□□ -0.31
BDNF-202ENST00000356660 AQP5P55064 265 aa13.13□□□□□ -0.31
BDNF-202ENST00000356660 SOX10P56693 466 aa13.13□□□□□ -0.31
BDNF-202ENST00000356660 PTF1AQ7RTS3 328 aa13.13□□□□□ -0.31
BDNF-202ENST00000356660 DPP9Q86TI2 863 aa13.13□□□□□ -0.31
BDNF-202ENST00000356660 FAM71DQ8N9W8 422 aa13.13□□□□□ -0.31
BDNF-202ENST00000356660 PROSCO94903 275 aa13.13□□□□□ -0.31
BDNF-202ENST00000356660 SHMT1P34896 483 aa13.13□□□□□ -0.31
BDNF-202ENST00000356660 ZNF200P98182 395 aaPredicted RBP13.13□□□□□ -0.31
BDNF-202ENST00000356660 GPR162Q16538 588 aa13.13□□□□□ -0.31
BDNF-202ENST00000356660 HSP90AA5PQ58FG0 334 aa13.13□□□□□ -0.31
BDNF-202ENST00000356660 CDCA2Q69YH5 1023 aaPredicted RBP13.13□□□□□ -0.31
BDNF-202ENST00000356660 OTOP1Q7RTM1 612 aa13.13□□□□□ -0.31
BDNF-202ENST00000356660 GALNT15Q8N3T1 639 aa13.13□□□□□ -0.31
BDNF-202ENST00000356660 DTNBP1Q96EV8 351 aa13.13□□□□□ -0.31
BDNF-202ENST00000356660 KREMEN1Q96MU8 473 aa13.13□□□□□ -0.31
BDNF-202ENST00000356660 TRIM56Q9BRZ2 755 aaKnown RBP13.13□□□□□ -0.31
BDNF-202ENST00000356660 MSTO1Q9BUK6 570 aa13.13□□□□□ -0.31
BDNF-202ENST00000356660 FAM49AQ9H0Q0 323 aaPredicted RBP13.13□□□□□ -0.31
BDNF-202ENST00000356660 PDE5AO76074 875 aa13.13□□□□□ -0.31
BDNF-202ENST00000356660 PGM3O95394 542 aa13.13□□□□□ -0.31
BDNF-202ENST00000356660 ASMTLO95671 621 aa13.13□□□□□ -0.31
BDNF-202ENST00000356660 WEE2P0C1S8 567 aa13.13□□□□□ -0.31
BDNF-202ENST00000356660 SCNN1BP51168 640 aa13.13□□□□□ -0.31
BDNF-202ENST00000356660 ALCAMQ13740 583 aa13.13□□□□□ -0.31
BDNF-202ENST00000356660 CYTH1Q15438 398 aa13.13□□□□□ -0.31
BDNF-202ENST00000356660 ALYREFQ86V81 257 aaKnown RBP13.13□□□□□ -0.31
BDNF-202ENST00000356660 RCOR2Q8IZ40 523 aa13.13□□□□□ -0.31
BDNF-202ENST00000356660 ZCCHC9Q8N567 271 aaKnown RBP13.13□□□□□ -0.31
BDNF-202ENST00000356660 LRGUKQ96M69 825 aa13.13□□□□□ -0.31
BDNF-202ENST00000356660 SENP7Q9BQF6 1050 aa13.13□□□□□ -0.31
BDNF-202ENST00000356660 TMEM8AQ9HCN3 771 aa13.13□□□□□ -0.31
BDNF-202ENST00000356660 SAR1AQ9NR31 198 aa13.13□□□□□ -0.31
BDNF-202ENST00000356660 PARVAQ9NVD7 372 aa13.13□□□□□ -0.31
BDNF-202ENST00000356660 KCPQ6ZWJ8 1503 aa13.13□□□□□ -0.31
BDNF-202ENST00000356660 ADGRA3Q8IWK6 1321 aa13.13□□□□□ -0.31
BDNF-202ENST00000356660 YWHABP31946 246 aaKnown RBP13.12□□□□□ -0.31
BDNF-202ENST00000356660 GCLCP48506 637 aaPredicted RBP13.12□□□□□ -0.31
BDNF-202ENST00000356660 TAS2R40P59535 323 aa13.12□□□□□ -0.31
BDNF-202ENST00000356660 BMPR2Q13873 1038 aa13.12□□□□□ -0.31
BDNF-202ENST00000356660 MAPK6Q16659 721 aa13.12□□□□□ -0.31
BDNF-202ENST00000356660 CLEC16AQ2KHT3 1053 aa13.12□□□□□ -0.31
BDNF-202ENST00000356660 EFCAB3Q8N7B9 438 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms