RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 PSMD12O00232 456 aaPredicted RBP5.77□□□□□ -1.49
PTPRD-202ENST00000356435 EXTL3O43909 919 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 HBP1O60381 514 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 NR3C2P08235 984 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 CDC27P30260 824 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 TMEM62Q0P6H9 643 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 HIC1Q14526 733 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 STAT4Q14765 748 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 ALX1Q15699 326 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 NT5DC1Q5TFE4 455 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 C4orf22Q6V702 233 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 CD302Q8IX05 232 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 GUF1Q8N442 669 aaKnown RBP5.77□□□□□ -1.49
PTPRD-202ENST00000356435 RBBP8NLQ8NC74 664 aaPredicted RBP5.77□□□□□ -1.49
PTPRD-202ENST00000356435 EXD1Q8NHP7 514 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 ARMC7Q9H6L4 198 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 ANKZF1Q9H8Y5 726 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 LY9Q9HBG7 655 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 SENP2Q9HC62 589 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 DAB1O75553 588 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 RHOBTB3O94955 611 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 BMP10O95393 424 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 EIF2S1P05198 315 aaKnown RBP5.77□□□□□ -1.49
PTPRD-202ENST00000356435 POLBP06746 335 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 CYP19A1P11511 503 aaPredicted RBP5.77□□□□□ -1.49
PTPRD-202ENST00000356435 VCAM1P19320 739 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 FECHP22830 423 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 KPNA1P52294 538 aaPredicted RBP5.77□□□□□ -1.49
PTPRD-202ENST00000356435 NFIXQ14938 502 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 VPS72Q15906 364 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 EZH2Q15910 746 aaKnown RBP5.77□□□□□ -1.49
PTPRD-202ENST00000356435 SNRNP35Q16560 246 aaKnown RBP5.77□□□□□ -1.49
PTPRD-202ENST00000356435 ZNF284Q2VY69 593 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 TBC1D16Q8TBP0 767 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 FAR2Q96K12 515 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 ELAC2Q9BQ52 826 aaKnown RBP5.77□□□□□ -1.49
PTPRD-202ENST00000356435 RMND5AQ9H871 391 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 CYP4F11Q9HBI6 524 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 MYOZ2Q9NPC6 264 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 RAD18Q9NS91 495 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 SMG5Q9UPR3 1016 aaKnown RBP5.77□□□□□ -1.49
PTPRD-202ENST00000356435 A0A1W2PQC6 194 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 POLRMTO00411 1230 aaKnown RBP5.76□□□□□ -1.49
PTPRD-202ENST00000356435 ERN1O75460 977 aaKnown RBP5.76□□□□□ -1.49
PTPRD-202ENST00000356435 ANXA9O76027 345 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 RHOBTB1O94844 696 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 GPD1P21695 349 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 PCYT1AP49585 367 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 RGS7P49802 495 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 RAB27AP51159 221 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 IPMKQ8NFU5 416 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 NIF3L1Q9GZT8 377 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 TASP1Q9H6P5 420 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 RSAD1Q9HA92 442 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 C20orf96Q9NUD7 363 aaPredicted RBP5.76□□□□□ -1.49
PTPRD-202ENST00000356435 FAM49BQ9NUQ9 324 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 ABI2Q9NYB9 513 aaPredicted RBP5.76□□□□□ -1.49
PTPRD-202ENST00000356435 DCTN4Q9UJW0 460 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.76□□□□□ -1.49
PTPRD-202ENST00000356435 SLIT1O75093 1534 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 CEMIPQ8WUJ3 1361 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 STX7O15400 261 aaKnown RBP5.76□□□□□ -1.49
PTPRD-202ENST00000356435 XYLBO75191 536 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 AMHP03971 560 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 ITGALP20701 1170 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 ALDH18A1P54886 795 aaKnown RBP5.76□□□□□ -1.49
PTPRD-202ENST00000356435 PPP2R2AP63151 447 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 GSTA3Q16772 222 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 TRIM71Q2Q1W2 868 aaKnown RBP5.76□□□□□ -1.49
PTPRD-202ENST00000356435 SNX30Q5VWJ9 437 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 ZNF662Q6ZS27 426 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 CARNMT1Q8N4J0 409 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 AGBL3Q8NEM8 1001 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 RDM1Q8NG50 284 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 AGR3Q8TD06 166 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 MAGEB10Q96LZ2 347 aaPredicted RBP5.76□□□□□ -1.49
PTPRD-202ENST00000356435 HPS4Q9NQG7 708 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 GID8Q9NWU2 228 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 EIF3LQ9Y262 564 aaKnown RBP5.76□□□□□ -1.49
PTPRD-202ENST00000356435 ATP11BQ9Y2G3 1177 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 PRR23AA6NEV1 266 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 CYTH3O43739 400 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 SPRP35270 261 aaPredicted RBP5.76□□□□□ -1.49
PTPRD-202ENST00000356435 BAATQ14032 418 aaPredicted RBP5.76□□□□□ -1.49
PTPRD-202ENST00000356435 PTPN21Q16825 1174 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 ZNF280DQ6N043 979 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 POTEAQ6S8J7 498 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 CYP4Z1Q86W10 505 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 MB21D2Q8IYB1 491 aaPredicted RBP5.76□□□□□ -1.49
PTPRD-202ENST00000356435 GPRASP2Q96D09 838 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 STAMBPL1Q96FJ0 436 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 THOC1Q96FV9 657 aaKnown RBP5.76□□□□□ -1.49
PTPRD-202ENST00000356435 PSMC3IPQ9P2W1 217 aaPredicted RBP5.76□□□□□ -1.49
PTPRD-202ENST00000356435 TRMT6Q9UJA5 497 aaKnown RBP5.76□□□□□ -1.49
PTPRD-202ENST00000356435 IFT172Q9UG01 1749 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 F8W810 466 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 TK2O00142 265 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 CYP26A1O43174 497 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 GAS2O43903 313 aaKnown RBP5.76□□□□□ -1.49
PTPRD-202ENST00000356435 VPS26AO75436 327 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms