RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 F8W810 466 aa11.47□□□□□ -0.57
GTF3C1-201ENST00000356183 EEF2KO00418 725 aaKnown RBP11.47□□□□□ -0.57
GTF3C1-201ENST00000356183 GRAP2O75791 330 aa11.47□□□□□ -0.57
GTF3C1-201ENST00000356183 RALAP11233 206 aa11.47□□□□□ -0.57
GTF3C1-201ENST00000356183 CDK17Q00537 523 aa11.47□□□□□ -0.57
GTF3C1-201ENST00000356183 INAQ16352 499 aa11.47□□□□□ -0.57
GTF3C1-201ENST00000356183 DPY19L2Q6NUT2 758 aa11.47□□□□□ -0.57
GTF3C1-201ENST00000356183 ELMSAN1Q6PJG2 1045 aa11.47□□□□□ -0.57
GTF3C1-201ENST00000356183 UTS2BQ765I0 119 aa11.47□□□□□ -0.57
GTF3C1-201ENST00000356183 EFHBQ8N7U6 833 aa11.47□□□□□ -0.57
GTF3C1-201ENST00000356183 TRIM63Q969Q1 353 aa11.47□□□□□ -0.57
GTF3C1-201ENST00000356183 MEI4A8MW99 385 aa11.47□□□□□ -0.57
GTF3C1-201ENST00000356183 PEX1O43933 1283 aa11.47□□□□□ -0.57
GTF3C1-201ENST00000356183 RRM2P31350 389 aa11.47□□□□□ -0.57
GTF3C1-201ENST00000356183 ETFBP38117 255 aa11.47□□□□□ -0.57
GTF3C1-201ENST00000356183 HSD17B4P51659 736 aa11.47□□□□□ -0.57
GTF3C1-201ENST00000356183 PUDPQ08623 228 aa11.47□□□□□ -0.57
GTF3C1-201ENST00000356183 CDC16Q13042 620 aa11.47□□□□□ -0.57
GTF3C1-201ENST00000356183 AP3B2Q13367 1082 aa11.47□□□□□ -0.57
GTF3C1-201ENST00000356183 PTRHD1Q6GMV3 140 aaKnown RBP11.47□□□□□ -0.57
GTF3C1-201ENST00000356183 KRCC1Q9NPI7 259 aaPredicted RBP11.47□□□□□ -0.57
GTF3C1-201ENST00000356183 STK39Q9UEW8 545 aa11.47□□□□□ -0.57
GTF3C1-201ENST00000356183 KLHL20Q9Y2M5 609 aa11.47□□□□□ -0.57
GTF3C1-201ENST00000356183 TRPC5OSA6NMA1 111 aa11.47□□□□□ -0.57
GTF3C1-201ENST00000356183 RAD17O75943 681 aa11.47□□□□□ -0.57
GTF3C1-201ENST00000356183 CYP19A1P11511 503 aaPredicted RBP11.47□□□□□ -0.57
GTF3C1-201ENST00000356183 ADRM1Q16186 407 aa11.47□□□□□ -0.57
GTF3C1-201ENST00000356183 ZRANB3Q5FWF4 1079 aa11.47□□□□□ -0.57
GTF3C1-201ENST00000356183 KLHL24Q6TFL4 600 aa11.47□□□□□ -0.57
GTF3C1-201ENST00000356183 IPMKQ8NFU5 416 aa11.47□□□□□ -0.57
GTF3C1-201ENST00000356183 LXNQ9BS40 222 aa11.47□□□□□ -0.57
GTF3C1-201ENST00000356183 DCUN1D5Q9BTE7 237 aa11.47□□□□□ -0.57
GTF3C1-201ENST00000356183 ROPN1BQ9BZX4 212 aaPredicted RBP11.47□□□□□ -0.57
GTF3C1-201ENST00000356183 ROPN1Q9HAT0 212 aaPredicted RBP11.47□□□□□ -0.57
GTF3C1-201ENST00000356183 NR5A2O00482 541 aa11.47□□□□□ -0.57
GTF3C1-201ENST00000356183 BCL10O95999 233 aa11.47□□□□□ -0.57
GTF3C1-201ENST00000356183 CRKLP46109 303 aaKnown RBP11.47□□□□□ -0.57
GTF3C1-201ENST00000356183 RFX3P48380 749 aa11.47□□□□□ -0.57
GTF3C1-201ENST00000356183 GALCP54803 685 aa11.47□□□□□ -0.57
GTF3C1-201ENST00000356183 IL5RAQ01344 420 aa11.47□□□□□ -0.57
GTF3C1-201ENST00000356183 NDUFA5Q16718 116 aa11.47□□□□□ -0.57
GTF3C1-201ENST00000356183 TYW3Q6IPR3 259 aaKnown RBP11.47□□□□□ -0.57
GTF3C1-201ENST00000356183 SETD3Q86TU7 594 aaPredicted RBP11.47□□□□□ -0.57
GTF3C1-201ENST00000356183 CASKIN2Q8WXE0 1202 aa11.47□□□□□ -0.57
GTF3C1-201ENST00000356183 RIC8BQ9NVN3 520 aa11.47□□□□□ -0.57
GTF3C1-201ENST00000356183 AGO2Q9UKV8 859 aaKnown RBP11.47□□□□□ -0.57
GTF3C1-201ENST00000356183 PVALEFA0A1B0GWK0 134 aa11.47□□□□□ -0.57
GTF3C1-201ENST00000356183 GOLGA8TH3BQL2 631 aa11.47□□□□□ -0.57
GTF3C1-201ENST00000356183 ZBTB5O15062 677 aa11.47□□□□□ -0.57
GTF3C1-201ENST00000356183 FOXP2O15409 715 aa11.47□□□□□ -0.57
GTF3C1-201ENST00000356183 SPRP35270 261 aaPredicted RBP11.47□□□□□ -0.57
GTF3C1-201ENST00000356183 TRAF2Q12933 501 aa11.47□□□□□ -0.57
GTF3C1-201ENST00000356183 ISLR2Q6UXK2 745 aa11.47□□□□□ -0.57
GTF3C1-201ENST00000356183 ARID3BQ8IVW6 561 aaPredicted RBP11.47□□□□□ -0.57
GTF3C1-201ENST00000356183 UNC45BQ8IWX7 931 aa11.47□□□□□ -0.57
GTF3C1-201ENST00000356183 RMDN3Q96TC7 470 aa11.47□□□□□ -0.57
GTF3C1-201ENST00000356183 MUC3BQ9H195 1237 aa11.47□□□□□ -0.57
GTF3C1-201ENST00000356183 CPB1P15086 417 aa11.47□□□□□ -0.57
GTF3C1-201ENST00000356183 CCT3P49368 545 aaKnown RBP11.47□□□□□ -0.57
GTF3C1-201ENST00000356183 PRIM2P49643 509 aa11.47□□□□□ -0.57
GTF3C1-201ENST00000356183 POU4F1Q01851 419 aa11.47□□□□□ -0.57
GTF3C1-201ENST00000356183 USP13Q92995 863 aaPredicted RBP11.47□□□□□ -0.57
GTF3C1-201ENST00000356183 MAGEB18Q96M61 343 aa11.47□□□□□ -0.57
GTF3C1-201ENST00000356183 KIFC1Q9BW19 673 aa11.47□□□□□ -0.57
GTF3C1-201ENST00000356183 LY9Q9HBG7 655 aa11.47□□□□□ -0.57
GTF3C1-201ENST00000356183 POLBP06746 335 aa11.46□□□□□ -0.57
GTF3C1-201ENST00000356183 RC3H1Q5TC82 1133 aaKnown RBP11.46□□□□□ -0.57
GTF3C1-201ENST00000356183 FAM71DQ8N9W8 422 aa11.46□□□□□ -0.57
GTF3C1-201ENST00000356183 MCPH1Q8NEM0 835 aa11.46□□□□□ -0.57
GTF3C1-201ENST00000356183 SGF29Q96ES7 293 aa11.46□□□□□ -0.57
GTF3C1-201ENST00000356183 AVENQ9NQS1 362 aaPredicted RBP11.46□□□□□ -0.57
GTF3C1-201ENST00000356183 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.46□□□□□ -0.57
GTF3C1-201ENST00000356183 SAC3D1A6NKF1 404 aa11.46□□□□□ -0.57
GTF3C1-201ENST00000356183 TAF5Q15542 800 aa11.46□□□□□ -0.57
GTF3C1-201ENST00000356183 RBM43Q6ZSC3 357 aaKnown RBP11.46□□□□□ -0.57
GTF3C1-201ENST00000356183 KRT78Q8N1N4 520 aa11.46□□□□□ -0.57
GTF3C1-201ENST00000356183 ISCUQ9H1K1 167 aa11.46□□□□□ -0.57
GTF3C1-201ENST00000356183 HPS5Q9UPZ3 1129 aa11.46□□□□□ -0.57
GTF3C1-201ENST00000356183 F8VZ95 297 aa11.46□□□□□ -0.57
GTF3C1-201ENST00000356183 STX7O15400 261 aaKnown RBP11.46□□□□□ -0.57
GTF3C1-201ENST00000356183 ZNF682O95780 498 aa11.46□□□□□ -0.57
GTF3C1-201ENST00000356183 GSTM1P09488 218 aa11.46□□□□□ -0.57
GTF3C1-201ENST00000356183 NMT1P30419 496 aaKnown RBP11.46□□□□□ -0.57
GTF3C1-201ENST00000356183 KCNJ1P48048 391 aa11.46□□□□□ -0.57
GTF3C1-201ENST00000356183 ADARP55265 1226 aaKnown RBP11.46□□□□□ -0.57
GTF3C1-201ENST00000356183 C21orf59P57076 290 aa11.46□□□□□ -0.57
GTF3C1-201ENST00000356183 TRIM32Q13049 653 aa11.46□□□□□ -0.57
GTF3C1-201ENST00000356183 NEDD8Q15843 81 aa11.46□□□□□ -0.57
GTF3C1-201ENST00000356183 SLC18A3Q16572 532 aa11.46□□□□□ -0.57
GTF3C1-201ENST00000356183 ENOSF1Q7L5Y1 443 aa11.46□□□□□ -0.57
GTF3C1-201ENST00000356183 JADE3Q92613 823 aa11.46□□□□□ -0.57
GTF3C1-201ENST00000356183 CHORDC1Q9UHD1 332 aaPredicted RBP11.46□□□□□ -0.57
GTF3C1-201ENST00000356183 STKLD1Q8NE28 680 aa11.46□□□□□ -0.58
GTF3C1-201ENST00000356183 VMP1Q96GC9 406 aa11.46□□□□□ -0.58
GTF3C1-201ENST00000356183 CPSF4O95639 269 aaKnown RBP11.46□□□□□ -0.58
GTF3C1-201ENST00000356183 ZNF618Q5T7W0 954 aa11.46□□□□□ -0.58
GTF3C1-201ENST00000356183 BNC2Q6ZN30 1099 aaPredicted RBP11.46□□□□□ -0.58
GTF3C1-201ENST00000356183 KCTD14Q9BQ13 255 aaPredicted RBP11.46□□□□□ -0.58
GTF3C1-201ENST00000356183 TMEM120AQ9BXJ8 343 aa11.46□□□□□ -0.58
GTF3C1-201ENST00000356183 TALDO1P37837 337 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms