RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 EML3Q32P44 896 aa14.28□□□□□ -0.12
TRIM4-203ENST00000355947 SLC45A4Q5BKX6 768 aa14.28□□□□□ -0.12
TRIM4-203ENST00000355947 IRGCQ6NXR0 463 aa14.28□□□□□ -0.12
TRIM4-203ENST00000355947 OGFOD1Q8N543 542 aa14.28□□□□□ -0.12
TRIM4-203ENST00000355947 DNAJC1Q96KC8 554 aaKnown RBP14.28□□□□□ -0.12
TRIM4-203ENST00000355947 TMEM8AQ9HCN3 771 aa14.28□□□□□ -0.12
TRIM4-203ENST00000355947 PCMTD2Q9NV79 361 aa14.28□□□□□ -0.12
TRIM4-203ENST00000355947 CLIC5Q9NZA1 410 aa14.28□□□□□ -0.12
TRIM4-203ENST00000355947 NYAP2Q9P242 653 aa14.28□□□□□ -0.12
TRIM4-203ENST00000355947 TRIM49D1C9J1S8 452 aa14.28□□□□□ -0.12
TRIM4-203ENST00000355947 H7C0C1 242 aa14.28□□□□□ -0.12
TRIM4-203ENST00000355947 LIASO43766 372 aa14.28□□□□□ -0.12
TRIM4-203ENST00000355947 LMNAP02545 664 aaKnown RBP14.28□□□□□ -0.12
TRIM4-203ENST00000355947 WEE2P0C1S8 567 aa14.28□□□□□ -0.12
TRIM4-203ENST00000355947 ACADSP16219 412 aa14.28□□□□□ -0.12
TRIM4-203ENST00000355947 ATP5OP48047 213 aa14.28□□□□□ -0.12
TRIM4-203ENST00000355947 AQP5P55064 265 aa14.28□□□□□ -0.12
TRIM4-203ENST00000355947 MCL1Q07820 350 aa14.28□□□□□ -0.12
TRIM4-203ENST00000355947 MTMR1Q13613 665 aa14.28□□□□□ -0.12
TRIM4-203ENST00000355947 ACVR2BQ13705 512 aa14.28□□□□□ -0.12
TRIM4-203ENST00000355947 CHI3L2Q15782 390 aa14.28□□□□□ -0.12
TRIM4-203ENST00000355947 SCYL2Q6P3W7 929 aa14.28□□□□□ -0.12
TRIM4-203ENST00000355947 MOXD1Q6UVY6 613 aa14.28□□□□□ -0.12
TRIM4-203ENST00000355947 CDR2LQ86X02 465 aaPredicted RBP14.28□□□□□ -0.12
TRIM4-203ENST00000355947 ATP11CQ8NB49 1132 aa14.28□□□□□ -0.12
TRIM4-203ENST00000355947 ZNF184Q99676 751 aaPredicted RBP14.28□□□□□ -0.12
TRIM4-203ENST00000355947 LGALS13Q9UHV8 139 aa14.28□□□□□ -0.12
TRIM4-203ENST00000355947 TBX20Q9UMR3 447 aa14.28□□□□□ -0.12
TRIM4-203ENST00000355947 EXOC7Q9UPT5 735 aa14.28□□□□□ -0.12
TRIM4-203ENST00000355947 HEY1Q9Y5J3 304 aa14.28□□□□□ -0.12
TRIM4-203ENST00000355947 AK5Q9Y6K8 562 aa14.28□□□□□ -0.12
TRIM4-203ENST00000355947 H0YIN7 160 aa14.27□□□□□ -0.12
TRIM4-203ENST00000355947 KRT19P08727 400 aa14.27□□□□□ -0.12
TRIM4-203ENST00000355947 NCF2P19878 526 aaPredicted RBP14.27□□□□□ -0.12
TRIM4-203ENST00000355947 NT5C2P49902 561 aa14.27□□□□□ -0.12
TRIM4-203ENST00000355947 KBTBD12Q3ZCT8 623 aa14.27□□□□□ -0.12
TRIM4-203ENST00000355947 MROH9Q5TGP6 573 aa14.27□□□□□ -0.12
TRIM4-203ENST00000355947 C1orf228Q6PIY5 440 aa14.27□□□□□ -0.12
TRIM4-203ENST00000355947 RIPOR1Q6ZS17 1223 aa14.27□□□□□ -0.12
TRIM4-203ENST00000355947 SH3BP5LQ7L8J4 393 aa14.27□□□□□ -0.12
TRIM4-203ENST00000355947 C12orf50Q8NA57 414 aaPredicted RBP14.27□□□□□ -0.12
TRIM4-203ENST00000355947 GSTCDQ8NEC7 633 aa14.27□□□□□ -0.12
TRIM4-203ENST00000355947 EPAS1Q99814 870 aa14.27□□□□□ -0.12
TRIM4-203ENST00000355947 CDCA7Q9BWT1 371 aaPredicted RBP14.27□□□□□ -0.12
TRIM4-203ENST00000355947 RAVER2Q9HCJ3 691 aaKnown RBP14.27□□□□□ -0.12
TRIM4-203ENST00000355947 MRPL47Q9HD33 250 aaKnown RBP14.27□□□□□ -0.12
TRIM4-203ENST00000355947 C2CD2LO14523 706 aa14.27□□□□□ -0.13
TRIM4-203ENST00000355947 MSX2P35548 267 aaPredicted RBP14.27□□□□□ -0.13
TRIM4-203ENST00000355947 ELK3P41970 407 aa14.27□□□□□ -0.13
TRIM4-203ENST00000355947 HIRAP54198 1017 aaPredicted RBP14.27□□□□□ -0.13
TRIM4-203ENST00000355947 CENPCQ03188 943 aa14.27□□□□□ -0.13
TRIM4-203ENST00000355947 MAMLD1Q13495 774 aa14.27□□□□□ -0.13
TRIM4-203ENST00000355947 RABGAP1LQ5R372 815 aa14.27□□□□□ -0.13
TRIM4-203ENST00000355947 SCARA3Q6AZY7 606 aa14.27□□□□□ -0.13
TRIM4-203ENST00000355947 USP37Q86T82 979 aa14.27□□□□□ -0.13
TRIM4-203ENST00000355947 ARHGAP24Q8N264 748 aa14.27□□□□□ -0.13
TRIM4-203ENST00000355947 MBOAT7Q96N66 472 aa14.27□□□□□ -0.13
TRIM4-203ENST00000355947 TTC25Q96NG3 672 aa14.27□□□□□ -0.13
TRIM4-203ENST00000355947 RANBP17Q9H2T7 1088 aaKnown RBP14.27□□□□□ -0.13
TRIM4-203ENST00000355947 ACSS2Q9NR19 701 aa14.27□□□□□ -0.13
TRIM4-203ENST00000355947 PCDHB2Q9Y5E7 798 aa14.27□□□□□ -0.13
TRIM4-203ENST00000355947 STK24Q9Y6E0 443 aa14.27□□□□□ -0.13
TRIM4-203ENST00000355947 E5RJQ4 531 aa14.26□□□□□ -0.13
TRIM4-203ENST00000355947 GRAP2O75791 330 aa14.26□□□□□ -0.13
TRIM4-203ENST00000355947 PSMA2P25787 234 aa14.26□□□□□ -0.13
TRIM4-203ENST00000355947 GTF2H1P32780 548 aa14.26□□□□□ -0.13
TRIM4-203ENST00000355947 TCHHL1Q5QJ38 904 aaPredicted RBP14.26□□□□□ -0.13
TRIM4-203ENST00000355947 DARS2Q6PI48 645 aaKnown RBP14.26□□□□□ -0.13
TRIM4-203ENST00000355947 MFN1Q8IWA4 741 aa14.26□□□□□ -0.13
TRIM4-203ENST00000355947 RBM15BQ8NDT2 890 aaKnown RBP14.26□□□□□ -0.13
TRIM4-203ENST00000355947 SNRNP27Q8WVK2 155 aaKnown RBP14.26□□□□□ -0.13
TRIM4-203ENST00000355947 TMEM143Q96AN5 459 aa14.26□□□□□ -0.13
TRIM4-203ENST00000355947 FAM163AQ96GL9 167 aaPredicted RBP14.26□□□□□ -0.13
TRIM4-203ENST00000355947 ATXN7L3BQ96GX2 97 aa14.26□□□□□ -0.13
TRIM4-203ENST00000355947 OXNAD1Q96HP4 312 aaPredicted RBP14.26□□□□□ -0.13
TRIM4-203ENST00000355947 DDX18Q9NVP1 670 aaKnown RBP14.26□□□□□ -0.13
TRIM4-203ENST00000355947 FAM198AQ9UFP1 575 aa14.26□□□□□ -0.13
TRIM4-203ENST00000355947 MRPL11Q9Y3B7 192 aaKnown RBP14.26□□□□□ -0.13
TRIM4-203ENST00000355947 PAPPAQ13219 1627 aa14.26□□□□□ -0.13
TRIM4-203ENST00000355947 MAGEA13PA6NCF6 341 aa14.26□□□□□ -0.13
TRIM4-203ENST00000355947 A6NJR5 290 aa14.26□□□□□ -0.13
TRIM4-203ENST00000355947 SPECC1L-ADORA2AF8WAN1 911 aa14.26□□□□□ -0.13
TRIM4-203ENST00000355947 WFS1O76024 890 aa14.26□□□□□ -0.13
TRIM4-203ENST00000355947 GPX6P59796 221 aa14.26□□□□□ -0.13
TRIM4-203ENST00000355947 PPP2R5DQ14738 602 aa14.26□□□□□ -0.13
TRIM4-203ENST00000355947 TRIP10Q15642 601 aa14.26□□□□□ -0.13
TRIM4-203ENST00000355947 PPP6R3Q5H9R7 873 aaPredicted RBP14.26□□□□□ -0.13
TRIM4-203ENST00000355947 FOXB2Q5VYV0 432 aa14.26□□□□□ -0.13
TRIM4-203ENST00000355947 SYDE1Q6ZW31 735 aaPredicted RBP14.26□□□□□ -0.13
TRIM4-203ENST00000355947 POLNQ7Z5Q5 900 aa14.26□□□□□ -0.13
TRIM4-203ENST00000355947 GALNT15Q8N3T1 639 aa14.26□□□□□ -0.13
TRIM4-203ENST00000355947 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.26□□□□□ -0.13
TRIM4-203ENST00000355947 EZH1Q92800 747 aaPredicted RBP14.26□□□□□ -0.13
TRIM4-203ENST00000355947 PHF12Q96QT6 1004 aa14.26□□□□□ -0.13
TRIM4-203ENST00000355947 MMP19Q99542 508 aa14.26□□□□□ -0.13
TRIM4-203ENST00000355947 WDR35Q9P2L0 1181 aa14.26□□□□□ -0.13
TRIM4-203ENST00000355947 IRS2Q9Y4H2 1338 aa14.26□□□□□ -0.13
TRIM4-203ENST00000355947 BBOX1O75936 387 aa14.26□□□□□ -0.13
TRIM4-203ENST00000355947 SORBS2O94875 1100 aaKnown RBP14.26□□□□□ -0.13
TRIM4-203ENST00000355947 CIITAP33076 1130 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms