RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 UBA3Q8TBC4 463 aa27.16■■□□□ 1.94
CLK2-201ENST00000355560 LCMT1Q9UIC8 334 aa27.16■■□□□ 1.94
CLK2-201ENST00000355560 NME7Q9Y5B8 376 aa27.16■■□□□ 1.94
CLK2-201ENST00000355560 KPNA7A9QM74 516 aa27.16■■□□□ 1.94
CLK2-201ENST00000355560 CYP3A5P20815 502 aa27.16■■□□□ 1.94
CLK2-201ENST00000355560 PNPLA4P41247 253 aa27.16■■□□□ 1.94
CLK2-201ENST00000355560 LLGL1Q15334 1064 aa27.16■■□□□ 1.94
CLK2-201ENST00000355560 LCLAT1Q6UWP7 414 aa27.16■■□□□ 1.94
CLK2-201ENST00000355560 ACOT1Q86TX2 421 aa27.16■■□□□ 1.94
CLK2-201ENST00000355560 OR6B3Q8NGW1 331 aa27.16■■□□□ 1.94
CLK2-201ENST00000355560 CHST12Q9NRB3 414 aa27.16■■□□□ 1.94
CLK2-201ENST00000355560 MTUS1Q9ULD2 1270 aa27.16■■□□□ 1.94
CLK2-201ENST00000355560 MEIS3P2A8K0S8 358 aa27.15■■□□□ 1.94
CLK2-201ENST00000355560 PTGESO14684 152 aa27.15■■□□□ 1.94
CLK2-201ENST00000355560 SPTLC1O15269 473 aa27.15■■□□□ 1.94
CLK2-201ENST00000355560 GJC1P36383 396 aa27.15■■□□□ 1.94
CLK2-201ENST00000355560 APLP1P51693 650 aa27.15■■□□□ 1.94
CLK2-201ENST00000355560 DR1Q01658 176 aa27.15■■□□□ 1.94
CLK2-201ENST00000355560 XYLT1Q86Y38 959 aa27.15■■□□□ 1.94
CLK2-201ENST00000355560 AGO3Q9H9G7 860 aaKnown RBP27.15■■□□□ 1.94
CLK2-201ENST00000355560 GPR182O15218 404 aa27.14■■□□□ 1.94
CLK2-201ENST00000355560 KRT3P12035 628 aa27.14■■□□□ 1.94
CLK2-201ENST00000355560 TAF6P49848 677 aa27.14■■□□□ 1.94
CLK2-201ENST00000355560 GSCP56915 257 aaPredicted RBP27.14■■□□□ 1.94
CLK2-201ENST00000355560 ITGA7Q13683 1181 aa27.14■■□□□ 1.94
CLK2-201ENST00000355560 SMC1AQ14683 1233 aaKnown RBP27.14■■□□□ 1.94
CLK2-201ENST00000355560 WDR35Q9P2L0 1181 aa27.14■■□□□ 1.94
CLK2-201ENST00000355560 CEP350Q5VT06 3117 aa27.14■■□□□ 1.94
CLK2-201ENST00000355560 CHRNA3P32297 505 aa27.14■■□□□ 1.93
CLK2-201ENST00000355560 STILQ15468 1287 aa27.14■■□□□ 1.93
CLK2-201ENST00000355560 GOLGA7BQ2TAP0 167 aa27.14■■□□□ 1.93
CLK2-201ENST00000355560 MAGOHBQ96A72 148 aaKnown RBP27.14■■□□□ 1.93
CLK2-201ENST00000355560 VIPAS39Q9H9C1 493 aa27.14■■□□□ 1.93
CLK2-201ENST00000355560 ST7Q9NRC1 585 aa27.14■■□□□ 1.93
CLK2-201ENST00000355560 SLTMQ9NWH9 1034 aaKnown RBP eCLIP27.14■■□□□ 1.93
CLK2-201ENST00000355560 NOD1Q9Y239 953 aa27.14■■□□□ 1.93
CLK2-201ENST00000355560 SIGLEC16A6NMB1 481 aa27.13■■□□□ 1.93
CLK2-201ENST00000355560 F8VP50 259 aa27.13■■□□□ 1.93
CLK2-201ENST00000355560 PIGHQ14442 188 aaPredicted RBP27.13■■□□□ 1.93
CLK2-201ENST00000355560 SIX1Q15475 284 aaPredicted RBP27.13■■□□□ 1.93
CLK2-201ENST00000355560 PPP1R26Q5T8A7 1209 aaPredicted RBP27.13■■□□□ 1.93
CLK2-201ENST00000355560 UNC93AQ86WB7 457 aa27.13■■□□□ 1.93
CLK2-201ENST00000355560 CCDC50Q8IVM0 306 aa27.13■■□□□ 1.93
CLK2-201ENST00000355560 KATNAL2Q8IYT4 538 aa27.13■■□□□ 1.93
CLK2-201ENST00000355560 PPP1R10Q96QC0 940 aaKnown RBP27.13■■□□□ 1.93
CLK2-201ENST00000355560 OSBPL7Q9BZF2 842 aa27.13■■□□□ 1.93
CLK2-201ENST00000355560 TRMT13Q9NUP7 481 aaKnown RBP27.13■■□□□ 1.93
CLK2-201ENST00000355560 FAM49BQ9NUQ9 324 aa27.13■■□□□ 1.93
CLK2-201ENST00000355560 GDAP2Q9NXN4 497 aa27.13■■□□□ 1.93
CLK2-201ENST00000355560 UTP11Q9Y3A2 253 aaKnown RBP27.13■■□□□ 1.93
CLK2-201ENST00000355560 A8MXQ7 604 aa27.13■■□□□ 1.93
CLK2-201ENST00000355560 RARAP10276 462 aa27.13■■□□□ 1.93
CLK2-201ENST00000355560 TCF4P15884 667 aa27.13■■□□□ 1.93
CLK2-201ENST00000355560 RFC1P35251 1148 aaPredicted RBP27.13■■□□□ 1.93
CLK2-201ENST00000355560 MLH1P40692 756 aa27.13■■□□□ 1.93
CLK2-201ENST00000355560 GABRB2P47870 512 aa27.13■■□□□ 1.93
CLK2-201ENST00000355560 ACLYP53396 1101 aa27.13■■□□□ 1.93
CLK2-201ENST00000355560 CUL1Q13616 776 aa27.13■■□□□ 1.93
CLK2-201ENST00000355560 DHX34Q14147 1143 aaKnown RBP27.13■■□□□ 1.93
CLK2-201ENST00000355560 SV2CQ496J9 727 aa27.13■■□□□ 1.93
CLK2-201ENST00000355560 HACE1Q8IYU2 909 aa27.13■■□□□ 1.93
CLK2-201ENST00000355560 IPO4Q8TEX9 1081 aaKnown RBP27.13■■□□□ 1.93
CLK2-201ENST00000355560 CAVIN3Q969G5 261 aa27.13■■□□□ 1.93
CLK2-201ENST00000355560 ZBTB9Q96C00 473 aa27.13■■□□□ 1.93
CLK2-201ENST00000355560 TRIM51Q9BSJ1 452 aa27.13■■□□□ 1.93
CLK2-201ENST00000355560 UBXN6Q9BZV1 441 aa27.13■■□□□ 1.93
CLK2-201ENST00000355560 METTL5Q9NRN9 209 aaKnown RBP27.13■■□□□ 1.93
CLK2-201ENST00000355560 HPCAL4Q9UM19 191 aa27.13■■□□□ 1.93
CLK2-201ENST00000355560 BHMG1C9JSJ3 638 aaPredicted RBP27.12■■□□□ 1.93
CLK2-201ENST00000355560 FSCN2O14926 492 aa27.12■■□□□ 1.93
CLK2-201ENST00000355560 GHRP10912 638 aa27.12■■□□□ 1.93
CLK2-201ENST00000355560 HLTFQ14527 1009 aaKnown RBP eCLIP27.12■■□□□ 1.934e-7■□□□□ 8.9
CLK2-201ENST00000355560 ZNF268Q14587 947 aaPredicted RBP27.12■■□□□ 1.93
CLK2-201ENST00000355560 NIPA2Q8N8Q9 360 aa27.12■■□□□ 1.93
CLK2-201ENST00000355560 JOSD2Q8TAC2 188 aa27.12■■□□□ 1.93
CLK2-201ENST00000355560 PXYLP1Q8TE99 480 aa27.12■■□□□ 1.93
CLK2-201ENST00000355560 KBTBD7Q8WVZ9 684 aa27.12■■□□□ 1.93
CLK2-201ENST00000355560 HCRTO43612 131 aa27.11■■□□□ 1.93
CLK2-201ENST00000355560 CABYRO75952 493 aa27.11■■□□□ 1.93
CLK2-201ENST00000355560 CD52P31358 61 aa27.11■■□□□ 1.93
CLK2-201ENST00000355560 CYP1B1Q16678 543 aa27.11■■□□□ 1.93
CLK2-201ENST00000355560 DDX42Q86XP3 938 aaKnown RBP eCLIP27.11■■□□□ 1.939e-6■□□□□ 9.6
CLK2-201ENST00000355560 ACBD3Q9H3P7 528 aa27.11■■□□□ 1.93
CLK2-201ENST00000355560 DPEP3Q9H4B8 488 aa27.11■■□□□ 1.93
CLK2-201ENST00000355560 PADI3Q9ULW8 664 aa27.11■■□□□ 1.93
CLK2-201ENST00000355560 PFKMP08237 780 aa27.11■■□□□ 1.93
CLK2-201ENST00000355560 LRPAP1P30533 357 aa27.11■■□□□ 1.93
CLK2-201ENST00000355560 GPS2Q13227 327 aa27.11■■□□□ 1.93
CLK2-201ENST00000355560 TTC27Q6P3X3 843 aa27.11■■□□□ 1.93
CLK2-201ENST00000355560 CCDC137Q6PK04 289 aaKnown RBP27.11■■□□□ 1.93
CLK2-201ENST00000355560 EIF1ADQ8N9N8 165 aaKnown RBP27.11■■□□□ 1.93
CLK2-201ENST00000355560 APPL2Q8NEU8 664 aa27.11■■□□□ 1.93
CLK2-201ENST00000355560 LPPQ93052 612 aa27.11■■□□□ 1.93
CLK2-201ENST00000355560 GAD1Q99259 594 aa27.11■■□□□ 1.93
CLK2-201ENST00000355560 RAB17Q9H0T7 212 aa27.11■■□□□ 1.93
CLK2-201ENST00000355560 FAM153BP0C7A2 387 aa27.1■■□□□ 1.93
CLK2-201ENST00000355560 PSMA2P25787 234 aa27.1■■□□□ 1.93
CLK2-201ENST00000355560 LILRA4P59901 499 aa27.1■■□□□ 1.93
CLK2-201ENST00000355560 PTK7Q13308 1070 aa27.1■■□□□ 1.93
CLK2-201ENST00000355560 FAM153CQ494X1 144 aa27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms