RNA–Protein interactions for RNA: ENST00000355301.8

NPHP1-202, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 1,932 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-202ENST00000355301 DNAJB4Q9UDY4 337 aa10.19□□□□□ -0.78
NPHP1-202ENST00000355301 TSPAN16Q9UKR8 245 aa10.19□□□□□ -0.78
NPHP1-202ENST00000355301 COG5Q9UP83 839 aa10.19□□□□□ -0.78
NPHP1-202ENST00000355301 JRKLQ9Y4A0 524 aa10.19□□□□□ -0.78
NPHP1-202ENST00000355301 ALPK3Q96L96 1907 aa10.19□□□□□ -0.78
NPHP1-202ENST00000355301 MYH10P35580 1976 aa10.19□□□□□ -0.78
NPHP1-202ENST00000355301 GRID2IPA4D2P6 1211 aa10.19□□□□□ -0.78
NPHP1-202ENST00000355301 F8W810 466 aa10.19□□□□□ -0.78
NPHP1-202ENST00000355301 PALMO75781 387 aa10.19□□□□□ -0.78
NPHP1-202ENST00000355301 DGKIO75912 1065 aa10.19□□□□□ -0.78
NPHP1-202ENST00000355301 GPD2P43304 727 aa10.19□□□□□ -0.78
NPHP1-202ENST00000355301 BRCC3P46736 316 aa10.19□□□□□ -0.78
NPHP1-202ENST00000355301 OR1G1P47890 313 aa10.19□□□□□ -0.78
NPHP1-202ENST00000355301 MMS22LQ6ZRQ5 1243 aa10.19□□□□□ -0.78
NPHP1-202ENST00000355301 LRRC43Q8N309 656 aa10.19□□□□□ -0.78
NPHP1-202ENST00000355301 B3GALNT2Q8NCR0 500 aa10.19□□□□□ -0.78
NPHP1-202ENST00000355301 HASPINQ8TF76 798 aa10.19□□□□□ -0.78
NPHP1-202ENST00000355301 TOP1MTQ969P6 601 aa10.19□□□□□ -0.78
NPHP1-202ENST00000355301 NAPGQ99747 312 aaPredicted RBP10.19□□□□□ -0.78
NPHP1-202ENST00000355301 C11orf70Q9BRQ4 267 aa10.19□□□□□ -0.78
NPHP1-202ENST00000355301 DDX43Q9NXZ2 648 aaKnown RBP10.19□□□□□ -0.78
NPHP1-202ENST00000355301 CTTNBP2NLQ9P2B4 639 aa10.19□□□□□ -0.78
NPHP1-202ENST00000355301 CNOT8Q9UFF9 292 aaKnown RBP10.19□□□□□ -0.78
NPHP1-202ENST00000355301 TIMM13Q9Y5L4 95 aaPredicted RBP10.19□□□□□ -0.78
NPHP1-202ENST00000355301 TBKBP1A7MCY6 615 aa10.18□□□□□ -0.78
NPHP1-202ENST00000355301 I3L4J1 428 aa10.18□□□□□ -0.78
NPHP1-202ENST00000355301 M0QYV0 167 aa10.18□□□□□ -0.78
NPHP1-202ENST00000355301 NRP1O14786 923 aa10.18□□□□□ -0.78
NPHP1-202ENST00000355301 ATMINO43313 823 aaPredicted RBP10.18□□□□□ -0.78
NPHP1-202ENST00000355301 BAIAP3O94812 1187 aa10.18□□□□□ -0.78
NPHP1-202ENST00000355301 CALB1P05937 261 aa10.18□□□□□ -0.78
NPHP1-202ENST00000355301 TYMPP19971 482 aa10.18□□□□□ -0.78
NPHP1-202ENST00000355301 RRM1P23921 792 aa10.18□□□□□ -0.78
NPHP1-202ENST00000355301 PKDCCQ504Y2 493 aa10.18□□□□□ -0.78
NPHP1-202ENST00000355301 LIN9Q5TKA1 542 aa10.18□□□□□ -0.78
NPHP1-202ENST00000355301 SLFN11Q7Z7L1 901 aa10.18□□□□□ -0.78
NPHP1-202ENST00000355301 TMEM175Q9BSA9 504 aa10.18□□□□□ -0.78
NPHP1-202ENST00000355301 NUP85Q9BW27 656 aa10.18□□□□□ -0.78
NPHP1-202ENST00000355301 IL23AQ9NPF7 189 aa10.18□□□□□ -0.78
NPHP1-202ENST00000355301 FAM49BQ9NUQ9 324 aa10.18□□□□□ -0.78
NPHP1-202ENST00000355301 CYTH4Q9UIA0 394 aa10.18□□□□□ -0.78
NPHP1-202ENST00000355301 COL4A6Q14031 1691 aa10.18□□□□□ -0.78
NPHP1-202ENST00000355301 ENC1O14682 589 aa10.17□□□□□ -0.78
NPHP1-202ENST00000355301 TRAPPC3O43617 180 aa10.17□□□□□ -0.78
NPHP1-202ENST00000355301 CAPN15O75808 1086 aa10.17□□□□□ -0.78
NPHP1-202ENST00000355301 UPP2O95045 317 aa10.17□□□□□ -0.78
NPHP1-202ENST00000355301 AMHP03971 560 aa10.17□□□□□ -0.78
NPHP1-202ENST00000355301 ATP1A1P05023 1023 aaKnown RBP10.17□□□□□ -0.78
NPHP1-202ENST00000355301 ALDH2P05091 517 aa10.17□□□□□ -0.78
NPHP1-202ENST00000355301 PTPN1P18031 435 aaKnown RBP10.17□□□□□ -0.78
NPHP1-202ENST00000355301 PCSK1P29120 753 aa10.17□□□□□ -0.78
NPHP1-202ENST00000355301 WDR5P61964 334 aaKnown RBP10.17□□□□□ -0.78
NPHP1-202ENST00000355301 PDCLQ13371 301 aa10.17□□□□□ -0.78
NPHP1-202ENST00000355301 GOLGA7BQ2TAP0 167 aa10.17□□□□□ -0.78
NPHP1-202ENST00000355301 PTPN20Q4JDL3 420 aa10.17□□□□□ -0.78
NPHP1-202ENST00000355301 C2CD6Q53TS8 623 aa10.17□□□□□ -0.78
NPHP1-202ENST00000355301 KIAA0319Q5VV43 1072 aa10.17□□□□□ -0.78
NPHP1-202ENST00000355301 PAPD7Q5XG87 772 aaKnown RBP10.17□□□□□ -0.78
NPHP1-202ENST00000355301 PLEKHA7Q6IQ23 1121 aa10.17□□□□□ -0.78
NPHP1-202ENST00000355301 TTC30AQ86WT1 665 aa10.17□□□□□ -0.78
NPHP1-202ENST00000355301 ERICH1Q86X53 443 aa10.17□□□□□ -0.78
NPHP1-202ENST00000355301 METTL23Q86XA0 190 aa10.17□□□□□ -0.78
NPHP1-202ENST00000355301 SYCE1Q8N0S2 351 aa10.17□□□□□ -0.78
NPHP1-202ENST00000355301 ANKRD52Q8NB46 1076 aa10.17□□□□□ -0.78
NPHP1-202ENST00000355301 ZNF564Q8TBZ8 553 aaPredicted RBP10.17□□□□□ -0.78
NPHP1-202ENST00000355301 HNRNPABQ99729 332 aaKnown RBP10.17□□□□□ -0.78
NPHP1-202ENST00000355301 ACBD6Q9BR61 282 aa10.17□□□□□ -0.78
NPHP1-202ENST00000355301 L2HGDHQ9H9P8 463 aa10.17□□□□□ -0.78
NPHP1-202ENST00000355301 RC3H2Q9HBD1 1191 aaKnown RBP10.17□□□□□ -0.78
NPHP1-202ENST00000355301 MRPL47Q9HD33 250 aaKnown RBP10.17□□□□□ -0.78
NPHP1-202ENST00000355301 HESX1Q9UBX0 185 aa10.17□□□□□ -0.78
NPHP1-202ENST00000355301 PRKAG2Q9UGJ0 569 aa10.17□□□□□ -0.78
NPHP1-202ENST00000355301 CHORDC1Q9UHD1 332 aaPredicted RBP10.17□□□□□ -0.78
NPHP1-202ENST00000355301 ADAM28Q9UKQ2 775 aa10.17□□□□□ -0.78
NPHP1-202ENST00000355301 CDH9Q9ULB4 789 aa10.17□□□□□ -0.78
NPHP1-202ENST00000355301 STRIP2Q9ULQ0 834 aa10.17□□□□□ -0.78
NPHP1-202ENST00000355301 PCDHB8Q9UN66 801 aa10.17□□□□□ -0.78
NPHP1-202ENST00000355301 PRG3Q9Y2Y8 225 aaPredicted RBP10.17□□□□□ -0.78
NPHP1-202ENST00000355301 SCINQ9Y6U3 715 aa10.17□□□□□ -0.78
NPHP1-202ENST00000355301 TCRBV5S1A1TA0A578 114 aa10.17□□□□□ -0.78
NPHP1-202ENST00000355301 BUB1BO60566 1050 aaPredicted RBP10.17□□□□□ -0.78
NPHP1-202ENST00000355301 ATP2C2O75185 946 aa10.17□□□□□ -0.78
NPHP1-202ENST00000355301 TADA2AO75478 443 aa10.17□□□□□ -0.78
NPHP1-202ENST00000355301 URI1O94763 535 aaPredicted RBP10.17□□□□□ -0.78
NPHP1-202ENST00000355301 GALTP07902 379 aa10.17□□□□□ -0.78
NPHP1-202ENST00000355301 SETSIPP0DME0 302 aa10.17□□□□□ -0.78
NPHP1-202ENST00000355301 ACRP10323 421 aa10.17□□□□□ -0.78
NPHP1-202ENST00000355301 CCDC130P13994 396 aa10.17□□□□□ -0.78
NPHP1-202ENST00000355301 ACAT1P24752 427 aaKnown RBP10.17□□□□□ -0.78
NPHP1-202ENST00000355301 GABRB2P47870 512 aa10.17□□□□□ -0.78
NPHP1-202ENST00000355301 BCAT1P54687 386 aa10.17□□□□□ -0.78
NPHP1-202ENST00000355301 GSCP56915 257 aaPredicted RBP10.17□□□□□ -0.78
NPHP1-202ENST00000355301 PSMC1P62191 440 aaKnown RBP10.17□□□□□ -0.78
NPHP1-202ENST00000355301 AMPD2Q01433 879 aa10.17□□□□□ -0.78
NPHP1-202ENST00000355301 MEI1Q5TIA1 1274 aa10.17□□□□□ -0.78
NPHP1-202ENST00000355301 DAAM2Q86T65 1068 aa10.17□□□□□ -0.78
NPHP1-202ENST00000355301 FUKQ8N0W3 1084 aa10.17□□□□□ -0.78
NPHP1-202ENST00000355301 MSANTD4Q8NCY6 345 aa10.17□□□□□ -0.78
NPHP1-202ENST00000355301 UBA3Q8TBC4 463 aa10.17□□□□□ -0.78
NPHP1-202ENST00000355301 SLC2A14Q8TDB8 520 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms