RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 ATP2C1P98194 919 aaPredicted RBP8.34□□□□□ -1.07
HTT-201ENST00000355072 PREPLQ4J6C6 727 aaPredicted RBP8.34□□□□□ -1.07
HTT-201ENST00000355072 FAM167BQ9BTA0 163 aa8.34□□□□□ -1.07
HTT-201ENST00000355072 GOLPH3Q9H4A6 298 aa8.34□□□□□ -1.07
HTT-201ENST00000355072 SNRKQ9NRH2 765 aa8.34□□□□□ -1.07
HTT-201ENST00000355072 COMMD8Q9NX08 183 aa8.34□□□□□ -1.07
HTT-201ENST00000355072 PDE4DIPQ5VU43 2346 aa8.34□□□□□ -1.07
HTT-201ENST00000355072 CCDC154A6NI56 674 aa8.34□□□□□ -1.07
HTT-201ENST00000355072 SRGNP10124 158 aa8.34□□□□□ -1.07
HTT-201ENST00000355072 RCVRNP35243 200 aa8.34□□□□□ -1.07
HTT-201ENST00000355072 ITFG2Q969R8 447 aa8.34□□□□□ -1.07
HTT-201ENST00000355072 NIP7Q9Y221 180 aaKnown RBP eCLIP8.34□□□□□ -1.07
HTT-201ENST00000355072 ARSEP51690 589 aa8.34□□□□□ -1.07
HTT-201ENST00000355072 KDSRQ06136 332 aa8.34□□□□□ -1.07
HTT-201ENST00000355072 BTN2A1Q7KYR7 527 aa8.34□□□□□ -1.07
HTT-201ENST00000355072 VPS45Q9NRW7 570 aa8.34□□□□□ -1.07
HTT-201ENST00000355072 XDHP47989 1333 aa8.34□□□□□ -1.07
HTT-201ENST00000355072 GLRA3O75311 464 aa8.34□□□□□ -1.07
HTT-201ENST00000355072 CHN2P52757 468 aa8.34□□□□□ -1.07
HTT-201ENST00000355072 BCAR1P56945 870 aa8.34□□□□□ -1.07
HTT-201ENST00000355072 NDUFAF6Q330K2 333 aa8.34□□□□□ -1.07
HTT-201ENST00000355072 MROH9Q5TGP6 573 aa8.34□□□□□ -1.07
HTT-201ENST00000355072 MEI1Q5TIA1 1274 aa8.34□□□□□ -1.07
HTT-201ENST00000355072 B3GALT6Q96L58 329 aa8.34□□□□□ -1.07
HTT-201ENST00000355072 UBXN6Q9BZV1 441 aa8.34□□□□□ -1.07
HTT-201ENST00000355072 ARHGEF3Q9NR81 526 aa8.34□□□□□ -1.07
HTT-201ENST00000355072 EURLQ9NYK6 297 aa8.34□□□□□ -1.07
HTT-201ENST00000355072 ZC3H7BQ9UGR2 993 aaKnown RBP8.34□□□□□ -1.07
HTT-201ENST00000355072 PCDHB2Q9Y5E7 798 aa8.34□□□□□ -1.07
HTT-201ENST00000355072 PRAMEP78395 509 aa8.34□□□□□ -1.07
HTT-201ENST00000355072 FOXR2Q6PJQ5 311 aa8.34□□□□□ -1.07
HTT-201ENST00000355072 IFNL3Q8IZI9 196 aa8.34□□□□□ -1.07
HTT-201ENST00000355072 TDRD5Q8NAT2 981 aaKnown RBP8.34□□□□□ -1.07
HTT-201ENST00000355072 PAGR1Q9BTK6 254 aa8.34□□□□□ -1.07
HTT-201ENST00000355072 ZSCAN32Q9NX65 697 aa8.34□□□□□ -1.07
HTT-201ENST00000355072 CYP2C8P10632 490 aa8.34□□□□□ -1.07
HTT-201ENST00000355072 MMP14P50281 582 aa8.34□□□□□ -1.07
HTT-201ENST00000355072 ITKQ08881 620 aa8.34□□□□□ -1.07
HTT-201ENST00000355072 PTPRNQ16849 979 aa8.34□□□□□ -1.07
HTT-201ENST00000355072 THNSL1Q8IYQ7 743 aa8.34□□□□□ -1.07
HTT-201ENST00000355072 FLCNQ8NFG4 579 aa8.34□□□□□ -1.07
HTT-201ENST00000355072 RBM46Q8TBY0 533 aaKnown RBP8.34□□□□□ -1.07
HTT-201ENST00000355072 RRN3Q9NYV6 651 aa8.34□□□□□ -1.07
HTT-201ENST00000355072 CLIC4Q9Y696 253 aa8.34□□□□□ -1.07
HTT-201ENST00000355072 PLCG1P19174 1290 aa8.34□□□□□ -1.07
HTT-201ENST00000355072 GTF2H1P32780 548 aa8.34□□□□□ -1.07
HTT-201ENST00000355072 AKAP14Q86UN6 197 aa8.34□□□□□ -1.07
HTT-201ENST00000355072 IFT43Q96FT9 208 aa8.34□□□□□ -1.07
HTT-201ENST00000355072 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.34□□□□□ -1.07
HTT-201ENST00000355072 TECP42680 631 aa8.34□□□□□ -1.08
HTT-201ENST00000355072 GCLCP48506 637 aaPredicted RBP8.34□□□□□ -1.08
HTT-201ENST00000355072 GANQ9H2C0 597 aa8.34□□□□□ -1.08
HTT-201ENST00000355072 THAP1Q9NVV9 213 aa8.34□□□□□ -1.08
HTT-201ENST00000355072 ADAM22Q9P0K1 906 aa8.34□□□□□ -1.08
HTT-201ENST00000355072 MKLN1Q9UL63 735 aa8.34□□□□□ -1.08
HTT-201ENST00000355072 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.33□□□□□ -1.08
HTT-201ENST00000355072 KCNA2P16389 499 aa8.33□□□□□ -1.08
HTT-201ENST00000355072 ACADSBP45954 432 aa8.33□□□□□ -1.08
HTT-201ENST00000355072 PDIA2Q13087 525 aaKnown RBP8.33□□□□□ -1.08
HTT-201ENST00000355072 PICALMQ13492 652 aa8.33□□□□□ -1.08
HTT-201ENST00000355072 KRT78Q8N1N4 520 aa8.33□□□□□ -1.08
HTT-201ENST00000355072 UBE2QL1A1L167 161 aa8.33□□□□□ -1.08
HTT-201ENST00000355072 LRRIQ4A6NIV6 560 aa8.33□□□□□ -1.08
HTT-201ENST00000355072 H3BQF6 201 aa8.33□□□□□ -1.08
HTT-201ENST00000355072 GSTT1P30711 240 aa8.33□□□□□ -1.08
HTT-201ENST00000355072 SLC34A1Q06495 639 aa8.33□□□□□ -1.08
HTT-201ENST00000355072 DPYSQ14117 519 aa8.33□□□□□ -1.08
HTT-201ENST00000355072 FASTKD1Q53R41 847 aaKnown RBP8.33□□□□□ -1.08
HTT-201ENST00000355072 RBM43Q6ZSC3 357 aaKnown RBP8.33□□□□□ -1.08
HTT-201ENST00000355072 NUDT18Q6ZVK8 323 aa8.33□□□□□ -1.08
HTT-201ENST00000355072 MREGQ8N565 214 aa8.33□□□□□ -1.08
HTT-201ENST00000355072 PARD3BQ8TEW8 1205 aa8.33□□□□□ -1.08
HTT-201ENST00000355072 MED15Q96RN5 788 aa8.33□□□□□ -1.08
HTT-201ENST00000355072 OSBPL6Q9BZF3 934 aa8.33□□□□□ -1.08
HTT-201ENST00000355072 CCSER1Q9C0I3 900 aa8.33□□□□□ -1.08
HTT-201ENST00000355072 RHBDL2Q9NX52 303 aa8.33□□□□□ -1.08
HTT-201ENST00000355072 FBXO2Q9UK22 296 aaPredicted RBP8.33□□□□□ -1.08
HTT-201ENST00000355072 RAB21Q9UL25 225 aa8.33□□□□□ -1.08
HTT-201ENST00000355072 RAD51BO15315 384 aa8.33□□□□□ -1.08
HTT-201ENST00000355072 PRKAR1AP10644 381 aa8.33□□□□□ -1.08
HTT-201ENST00000355072 ZNF18P17022 549 aa8.33□□□□□ -1.08
HTT-201ENST00000355072 PHKA1P46020 1223 aa8.33□□□□□ -1.08
HTT-201ENST00000355072 CDH6P55285 790 aa8.33□□□□□ -1.08
HTT-201ENST00000355072 CDK16Q00536 496 aa8.33□□□□□ -1.08
HTT-201ENST00000355072 ACAP1Q15027 740 aa8.33□□□□□ -1.08
HTT-201ENST00000355072 A0A0D9SFI3 127 aa8.33□□□□□ -1.08
HTT-201ENST00000355072 UNC5CO95185 931 aa8.33□□□□□ -1.08
HTT-201ENST00000355072 MLNP12872 115 aa8.33□□□□□ -1.08
HTT-201ENST00000355072 GPTP24298 496 aa8.33□□□□□ -1.08
HTT-201ENST00000355072 EFHC1Q5JVL4 640 aa8.33□□□□□ -1.08
HTT-201ENST00000355072 SEL1L3Q68CR1 1132 aa8.33□□□□□ -1.08
HTT-201ENST00000355072 CHST3Q7LGC8 479 aa8.33□□□□□ -1.08
HTT-201ENST00000355072 PTF1AQ7RTS3 328 aa8.33□□□□□ -1.08
HTT-201ENST00000355072 ZNF589Q86UQ0 364 aaPredicted RBP8.33□□□□□ -1.08
HTT-201ENST00000355072 JARID2Q92833 1246 aaPredicted RBP8.33□□□□□ -1.08
HTT-201ENST00000355072 BORCS5Q969J3 196 aa8.33□□□□□ -1.08
HTT-201ENST00000355072 CITO14578 2027 aa8.33□□□□□ -1.08
HTT-201ENST00000355072 HUS1O60921 280 aa8.33□□□□□ -1.08
HTT-201ENST00000355072 GUCA1CO95843 209 aa8.33□□□□□ -1.08
HTT-201ENST00000355072 ZNF699Q32M78 642 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms