RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 RNPEPL1Q9HAU8 725 aa11.39□□□□□ -0.59
SND1-201ENST00000354725 PRKAG2Q9UGJ0 569 aa11.39□□□□□ -0.59
SND1-201ENST00000354725 KANSL1LA0AUZ9 987 aa11.38□□□□□ -0.59
SND1-201ENST00000354725 USP17L10C9JJH3 530 aa11.38□□□□□ -0.59
SND1-201ENST00000354725 EIF3DO15371 548 aaKnown RBP eCLIP11.38□□□□□ -0.59
SND1-201ENST00000354725 GDF11O95390 407 aa11.38□□□□□ -0.59
SND1-201ENST00000354725 ASMTLO95671 621 aa11.38□□□□□ -0.59
SND1-201ENST00000354725 PTENP60484 403 aa11.38□□□□□ -0.59
SND1-201ENST00000354725 PSMC6P62333 389 aa11.38□□□□□ -0.59
SND1-201ENST00000354725 BBS9Q3SYG4 887 aa11.38□□□□□ -0.59
SND1-201ENST00000354725 ALKBH5Q6P6C2 394 aaKnown RBP11.38□□□□□ -0.59
SND1-201ENST00000354725 JPH3Q8WXH2 748 aaPredicted RBP11.38□□□□□ -0.59
SND1-201ENST00000354725 LRRC45Q96CN5 670 aa11.38□□□□□ -0.59
SND1-201ENST00000354725 NDEL1Q9GZM8 345 aa11.38□□□□□ -0.59
SND1-201ENST00000354725 GBA3Q9H227 469 aa11.38□□□□□ -0.59
SND1-201ENST00000354725 ECT2Q9H8V3 914 aa11.38□□□□□ -0.59
SND1-201ENST00000354725 ELP3Q9H9T3 547 aa11.38□□□□□ -0.59
SND1-201ENST00000354725 DMAC2Q9NW81 257 aa11.38□□□□□ -0.59
SND1-201ENST00000354725 USP20Q9Y2K6 914 aa11.38□□□□□ -0.59
SND1-201ENST00000354725 LRCH1Q9Y2L9 728 aa11.38□□□□□ -0.59
SND1-201ENST00000354725 BRCA2P51587 3418 aa11.38□□□□□ -0.59
SND1-201ENST00000354725 POM121CA8CG34 1229 aa11.38□□□□□ -0.59
SND1-201ENST00000354725 KCNK3O14649 394 aa11.38□□□□□ -0.59
SND1-201ENST00000354725 CYP3A4P08684 503 aa11.38□□□□□ -0.59
SND1-201ENST00000354725 CHKAP35790 457 aa11.38□□□□□ -0.59
SND1-201ENST00000354725 SREBF1P36956 1147 aa11.38□□□□□ -0.59
SND1-201ENST00000354725 PPARDQ03181 441 aa11.38□□□□□ -0.59
SND1-201ENST00000354725 PRKG1Q13976 671 aa11.38□□□□□ -0.59
SND1-201ENST00000354725 DUPD1Q68J44 220 aa11.38□□□□□ -0.59
SND1-201ENST00000354725 CYP4F22Q6NT55 531 aa11.38□□□□□ -0.59
SND1-201ENST00000354725 GPIHBP1Q8IV16 184 aa11.38□□□□□ -0.59
SND1-201ENST00000354725 GLMNQ92990 594 aa11.38□□□□□ -0.59
SND1-201ENST00000354725 KLHL29Q96CT2 875 aa11.38□□□□□ -0.59
SND1-201ENST00000354725 CCDC17Q96LX7 622 aa11.38□□□□□ -0.59
SND1-201ENST00000354725 ADAM7Q9H2U9 754 aa11.38□□□□□ -0.59
SND1-201ENST00000354725 CCDC134Q9H6E4 229 aa11.38□□□□□ -0.59
SND1-201ENST00000354725 ZNF408Q9H9D4 720 aa11.38□□□□□ -0.59
SND1-201ENST00000354725 ARHGEF3Q9NR81 526 aa11.38□□□□□ -0.59
SND1-201ENST00000354725 SEPT10Q9P0V9 454 aa11.38□□□□□ -0.59
SND1-201ENST00000354725 A0A1W2PQ67 120 aa11.37□□□□□ -0.59
SND1-201ENST00000354725 TJP3O95049 919 aa11.37□□□□□ -0.59
SND1-201ENST00000354725 GH2P01242 217 aa11.37□□□□□ -0.59
SND1-201ENST00000354725 ITGA4P13612 1032 aa11.37□□□□□ -0.59
SND1-201ENST00000354725 DHX9Q08211 1270 aaKnown RBP11.37□□□□□ -0.59
SND1-201ENST00000354725 TBL3Q12788 808 aaKnown RBP11.37□□□□□ -0.59
SND1-201ENST00000354725 MTMR3Q13615 1198 aa11.37□□□□□ -0.59
SND1-201ENST00000354725 EXOC3L4Q17RC7 722 aa11.37□□□□□ -0.59
SND1-201ENST00000354725 DEFB115Q30KQ5 88 aa11.37□□□□□ -0.59
SND1-201ENST00000354725 PDCD4Q53EL6 469 aaKnown RBP11.37□□□□□ -0.59
SND1-201ENST00000354725 HERC4Q5GLZ8 1057 aaPredicted RBP11.37□□□□□ -0.59
SND1-201ENST00000354725 C6orf118Q5T5N4 469 aa11.37□□□□□ -0.59
SND1-201ENST00000354725 TMEM179Q6ZVK1 233 aa11.37□□□□□ -0.59
SND1-201ENST00000354725 CLEC10AQ8IUN9 316 aa11.37□□□□□ -0.59
SND1-201ENST00000354725 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.37□□□□□ -0.598e-7■■■■■ 143.2
SND1-201ENST00000354725 ZNF280CQ8ND82 737 aa11.37□□□□□ -0.59
SND1-201ENST00000354725 ANO3Q9BYT9 981 aa11.37□□□□□ -0.59
SND1-201ENST00000354725 DSEQ9UL01 958 aa11.37□□□□□ -0.59
SND1-201ENST00000354725 UBE4BO95155 1302 aa11.37□□□□□ -0.59
SND1-201ENST00000354725 TTC34A8MYJ7 566 aa11.37□□□□□ -0.59
SND1-201ENST00000354725 TMEM253P0C7T8 217 aa11.37□□□□□ -0.59
SND1-201ENST00000354725 FDX1P10109 184 aa11.37□□□□□ -0.59
SND1-201ENST00000354725 TUBA1BP68363 451 aa11.37□□□□□ -0.59
SND1-201ENST00000354725 KLRC3Q07444 240 aa11.37□□□□□ -0.59
SND1-201ENST00000354725 CCNG2Q16589 344 aa11.37□□□□□ -0.59
SND1-201ENST00000354725 ABCB5Q2M3G0 1257 aa11.37□□□□□ -0.59
SND1-201ENST00000354725 TMEM214Q6NUQ4 689 aaKnown RBP11.37□□□□□ -0.59
SND1-201ENST00000354725 POTEGQ6S5H5 508 aa11.37□□□□□ -0.59
SND1-201ENST00000354725 TUBA1AQ71U36 451 aa11.37□□□□□ -0.59
SND1-201ENST00000354725 NELFCDQ8IXH7 590 aa11.37□□□□□ -0.59
SND1-201ENST00000354725 CLK4Q9HAZ1 481 aaKnown RBP11.37□□□□□ -0.59
SND1-201ENST00000354725 BMP2KQ9NSY1 1161 aaPredicted RBP11.37□□□□□ -0.59
SND1-201ENST00000354725 NDFIP2Q9NV92 336 aa11.37□□□□□ -0.59
SND1-201ENST00000354725 ARMCX3Q9UH62 379 aaPredicted RBP11.37□□□□□ -0.59
SND1-201ENST00000354725 XPO7Q9UIA9 1087 aaKnown RBP11.37□□□□□ -0.59
SND1-201ENST00000354725 CCPG1Q9ULG6 757 aa11.37□□□□□ -0.59
SND1-201ENST00000354725 C2orf81A6NN90 581 aa11.37□□□□□ -0.59
SND1-201ENST00000354725 NBNO60934 754 aa11.37□□□□□ -0.59
SND1-201ENST00000354725 FBXO21O94952 628 aa11.37□□□□□ -0.59
SND1-201ENST00000354725 CCDC159P0C7I6 412 aa11.37□□□□□ -0.59
SND1-201ENST00000354725 TPBGLP0DKB5 382 aa11.37□□□□□ -0.59
SND1-201ENST00000354725 GALK1P51570 392 aa11.37□□□□□ -0.59
SND1-201ENST00000354725 PLS1Q14651 629 aa11.37□□□□□ -0.59
SND1-201ENST00000354725 KIF22Q14807 665 aa11.37□□□□□ -0.59
SND1-201ENST00000354725 SYCE1Q8N0S2 351 aa11.37□□□□□ -0.59
SND1-201ENST00000354725 KIF2BQ8N4N8 673 aa11.37□□□□□ -0.59
SND1-201ENST00000354725 ARL6IP6Q8N6S5 226 aa11.37□□□□□ -0.59
SND1-201ENST00000354725 LMO3Q8TAP4 145 aa11.37□□□□□ -0.59
SND1-201ENST00000354725 ASAP3Q8TDY4 903 aa11.37□□□□□ -0.59
SND1-201ENST00000354725 DCAF4Q8WV16 495 aa11.37□□□□□ -0.59
SND1-201ENST00000354725 ZNF317Q96PQ6 595 aaPredicted RBP11.37□□□□□ -0.59
SND1-201ENST00000354725 MKNK1Q9BUB5 465 aa11.37□□□□□ -0.59
SND1-201ENST00000354725 TMEM109Q9BVC6 243 aa11.37□□□□□ -0.59
SND1-201ENST00000354725 KIAA1683Q9H0B3 1180 aa11.37□□□□□ -0.59
SND1-201ENST00000354725 GOLPH3Q9H4A6 298 aa11.37□□□□□ -0.59
SND1-201ENST00000354725 FAIMQ9NVQ4 179 aa11.37□□□□□ -0.59
SND1-201ENST00000354725 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.37□□□□□ -0.593e-8■■■■□ 21.2
SND1-201ENST00000354725 NYAP2Q9P242 653 aa11.37□□□□□ -0.59
SND1-201ENST00000354725 TMX2Q9Y320 296 aa11.37□□□□□ -0.59
SND1-201ENST00000354725 IGSF9BQ9UPX0 1349 aa11.37□□□□□ -0.59
SND1-201ENST00000354725 GCOM1H8Y6P7 765 aaPredicted RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms