RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 ABLIM1O14639 778 aa17.18■□□□□ 0.34
DDX55-202ENST00000354291 TYMPP19971 482 aa17.18■□□□□ 0.34
DDX55-202ENST00000354291 LRPAP1P30533 357 aa17.18■□□□□ 0.34
DDX55-202ENST00000354291 MCM7P33993 719 aa17.18■□□□□ 0.34
DDX55-202ENST00000354291 PTGER3P43115 390 aa17.18■□□□□ 0.34
DDX55-202ENST00000354291 GUCY2FP51841 1108 aa17.18■□□□□ 0.34
DDX55-202ENST00000354291 RASSF3Q86WH2 238 aa17.18■□□□□ 0.34
DDX55-202ENST00000354291 SYT12Q8IV01 421 aa17.18■□□□□ 0.34
DDX55-202ENST00000354291 MDGA1Q8NFP4 955 aa17.18■□□□□ 0.34
DDX55-202ENST00000354291 LRIG1Q96JA1 1093 aa17.18■□□□□ 0.34
DDX55-202ENST00000354291 CNOT6LQ96LI5 555 aaKnown RBP17.18■□□□□ 0.34
DDX55-202ENST00000354291 LLPHQ9BRT6 129 aaKnown RBP17.18■□□□□ 0.34
DDX55-202ENST00000354291 CCDC86Q9H6F5 360 aaKnown RBP17.18■□□□□ 0.34
DDX55-202ENST00000354291 KMT5AQ9NQR1 393 aa17.18■□□□□ 0.34
DDX55-202ENST00000354291 HSFX1Q9UBD0 423 aa17.18■□□□□ 0.34
DDX55-202ENST00000354291 ANTXRLA6NF34 631 aa17.17■□□□□ 0.34
DDX55-202ENST00000354291 UPK3BL1B0FP48 263 aa17.17■□□□□ 0.34
DDX55-202ENST00000354291 UPK3BL2E5RIL1 263 aa17.17■□□□□ 0.34
DDX55-202ENST00000354291 TNFRSF10BO14763 440 aa17.17■□□□□ 0.34
DDX55-202ENST00000354291 CXCL8P10145 99 aa17.17■□□□□ 0.34
DDX55-202ENST00000354291 MATR3P43243 847 aaKnown RBP eCLIP17.17■□□□□ 0.34
DDX55-202ENST00000354291 AARSP49588 968 aaKnown RBP eCLIP17.17■□□□□ 0.34
DDX55-202ENST00000354291 FOSBP53539 338 aa17.17■□□□□ 0.34
DDX55-202ENST00000354291 NLRP12P59046 1061 aa17.17■□□□□ 0.34
DDX55-202ENST00000354291 ZNF423Q2M1K9 1284 aa17.17■□□□□ 0.34
DDX55-202ENST00000354291 RAB44Q7Z6P3 723 aaPredicted RBP17.17■□□□□ 0.34
DDX55-202ENST00000354291 TMEM150AQ86TG1 271 aa17.17■□□□□ 0.34
DDX55-202ENST00000354291 FRMD1Q8N878 549 aa17.17■□□□□ 0.34
DDX55-202ENST00000354291 OR10T2Q8NGX3 314 aa17.17■□□□□ 0.34
DDX55-202ENST00000354291 CCDC26Q8TAB7 109 aa17.17■□□□□ 0.34
DDX55-202ENST00000354291 USP33Q8TEY7 942 aa17.17■□□□□ 0.34
DDX55-202ENST00000354291 SENP8Q96LD8 212 aa17.17■□□□□ 0.34
DDX55-202ENST00000354291 ZSCAN31Q96LW9 406 aaPredicted RBP17.17■□□□□ 0.34
DDX55-202ENST00000354291 KIF9Q9HAQ2 790 aa17.17■□□□□ 0.34
DDX55-202ENST00000354291 ATXN2Q99700 1313 aaKnown RBP17.17■□□□□ 0.34
DDX55-202ENST00000354291 OPHN1O60890 802 aa17.16■□□□□ 0.34
DDX55-202ENST00000354291 F11P03951 625 aa17.16■□□□□ 0.34
DDX55-202ENST00000354291 ODC1P11926 461 aa17.16■□□□□ 0.34
DDX55-202ENST00000354291 DDX6P26196 483 aaKnown RBP eCLIP17.16■□□□□ 0.34
DDX55-202ENST00000354291 CCT6AP40227 531 aaKnown RBP17.16■□□□□ 0.34
DDX55-202ENST00000354291 PI4KAP42356 2102 aa17.16■□□□□ 0.34
DDX55-202ENST00000354291 IFNAR2P48551 515 aa17.16■□□□□ 0.34
DDX55-202ENST00000354291 ST3GAL1Q11201 340 aa17.16■□□□□ 0.34
DDX55-202ENST00000354291 MTF1Q14872 753 aa17.16■□□□□ 0.34
DDX55-202ENST00000354291 NOLC1Q14978 699 aaKnown RBP eCLIP17.16■□□□□ 0.34
DDX55-202ENST00000354291 ECM1Q16610 540 aa17.16■□□□□ 0.34
DDX55-202ENST00000354291 SLC23A3Q6PIS1 610 aa17.16■□□□□ 0.34
DDX55-202ENST00000354291 CCDC83Q8IWF9 413 aa17.16■□□□□ 0.34
DDX55-202ENST00000354291 MRPS31Q92665 395 aaKnown RBP17.16■□□□□ 0.34
DDX55-202ENST00000354291 C8orf76Q96K31 380 aa17.16■□□□□ 0.34
DDX55-202ENST00000354291 FNBP1Q96RU3 617 aa17.16■□□□□ 0.34
DDX55-202ENST00000354291 ARHGAP28Q9P2N2 729 aa17.16■□□□□ 0.34
DDX55-202ENST00000354291 UBQLN1Q9UMX0 589 aaKnown RBP17.16■□□□□ 0.34
DDX55-202ENST00000354291 MAGED2Q9UNF1 606 aaPredicted RBP17.16■□□□□ 0.34
DDX55-202ENST00000354291 RBM19Q9Y4C8 960 aaKnown RBP17.16■□□□□ 0.34
DDX55-202ENST00000354291 WNT6Q9Y6F9 365 aa17.16■□□□□ 0.34
DDX55-202ENST00000354291 CITO14578 2027 aa17.16■□□□□ 0.34
DDX55-202ENST00000354291 APC2O95996 2303 aa17.15■□□□□ 0.34
DDX55-202ENST00000354291 PPEF2O14830 753 aa17.15■□□□□ 0.34
DDX55-202ENST00000354291 SLC16A4O15374 487 aa17.15■□□□□ 0.34
DDX55-202ENST00000354291 HIP1RO75146 1068 aa17.15■□□□□ 0.34
DDX55-202ENST00000354291 TOM1L1O75674 476 aa17.15■□□□□ 0.34
DDX55-202ENST00000354291 ALDH1A2O94788 518 aa17.15■□□□□ 0.34
DDX55-202ENST00000354291 ITPKAP23677 461 aa17.15■□□□□ 0.34
DDX55-202ENST00000354291 LILRA4P59901 499 aa17.15■□□□□ 0.34
DDX55-202ENST00000354291 HMGN5P82970 282 aaKnown RBP17.15■□□□□ 0.34
DDX55-202ENST00000354291 GFPT1Q06210 699 aaPredicted RBP17.15■□□□□ 0.34
DDX55-202ENST00000354291 STRN3Q13033 797 aa17.15■□□□□ 0.34
DDX55-202ENST00000354291 NR1H3Q13133 447 aa17.15■□□□□ 0.34
DDX55-202ENST00000354291 ZBTB6Q15916 424 aa17.15■□□□□ 0.34
DDX55-202ENST00000354291 CRY1Q16526 586 aa17.15■□□□□ 0.34
DDX55-202ENST00000354291 LYSMD4Q5XG99 296 aa17.15■□□□□ 0.34
DDX55-202ENST00000354291 MON1AQ86VX9 555 aa17.15■□□□□ 0.34
DDX55-202ENST00000354291 PNPLA1Q8N8W4 532 aa17.15■□□□□ 0.34
DDX55-202ENST00000354291 OSCP1Q8WVF1 389 aa17.15■□□□□ 0.34
DDX55-202ENST00000354291 ATP2A3Q93084 1043 aa17.15■□□□□ 0.34
DDX55-202ENST00000354291 SPACA7Q96KW9 195 aa17.15■□□□□ 0.34
DDX55-202ENST00000354291 PLEKHA5Q9HAU0 1116 aa17.15■□□□□ 0.34
DDX55-202ENST00000354291 KIAA1024Q9UPX6 916 aa17.15■□□□□ 0.34
DDX55-202ENST00000354291 RAXQ9Y2V3 346 aa17.15■□□□□ 0.34
DDX55-202ENST00000354291 SFI1A8K8P3 1242 aa17.14■□□□□ 0.33
DDX55-202ENST00000354291 LACTBL1A8MY62 500 aa17.14■□□□□ 0.33
DDX55-202ENST00000354291 K7EQS6 105 aa17.14■□□□□ 0.33
DDX55-202ENST00000354291 CLDN3O15551 220 aa17.14■□□□□ 0.33
DDX55-202ENST00000354291 HAPLN1P10915 354 aaPredicted RBP17.14■□□□□ 0.33
DDX55-202ENST00000354291 CYP3A5P20815 502 aa17.14■□□□□ 0.33
DDX55-202ENST00000354291 P2RY2P41231 377 aa17.14■□□□□ 0.33
DDX55-202ENST00000354291 GUCY1B3Q02153 619 aa17.14■□□□□ 0.33
DDX55-202ENST00000354291 TMEM92Q6UXU6 159 aa17.14■□□□□ 0.33
DDX55-202ENST00000354291 DEFB119Q8N690 84 aa17.14■□□□□ 0.33
DDX55-202ENST00000354291 STKLD1Q8NE28 680 aa17.14■□□□□ 0.33
DDX55-202ENST00000354291 OR2I1PQ8NGU4 316 aa17.14■□□□□ 0.33
DDX55-202ENST00000354291 OLIG1Q8TAK6 271 aa17.14■□□□□ 0.33
DDX55-202ENST00000354291 MDM1Q8TC05 714 aa17.14■□□□□ 0.33
DDX55-202ENST00000354291 CAMK1GQ96NX5 476 aa17.14■□□□□ 0.33
DDX55-202ENST00000354291 CYP2S1Q96SQ9 504 aa17.14■□□□□ 0.33
DDX55-202ENST00000354291 ZCWPW1Q9H0M4 648 aa17.14■□□□□ 0.33
DDX55-202ENST00000354291 LINC00597Q9H2U6 94 aa17.14■□□□□ 0.33
DDX55-202ENST00000354291 FOXP1Q9H334 677 aaPredicted RBP17.14■□□□□ 0.33
DDX55-202ENST00000354291 TRPC7Q9HCX4 862 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms