RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 MAGEA10P43363 369 aaPredicted RBP1.88□□□□□ -2.11
BRCA1-202ENST00000354071 LIMS1P48059 325 aa1.88□□□□□ -2.11
BRCA1-202ENST00000354071 BCAT1P54687 386 aa1.88□□□□□ -2.11
BRCA1-202ENST00000354071 CASP6P55212 293 aa1.88□□□□□ -2.11
BRCA1-202ENST00000354071 RAP2BP61225 183 aa1.88□□□□□ -2.11
BRCA1-202ENST00000354071 THEMIS2Q5TEJ8 643 aa1.88□□□□□ -2.11
BRCA1-202ENST00000354071 FASTKD5Q7L8L6 764 aaKnown RBP1.88□□□□□ -2.11
BRCA1-202ENST00000354071 OR14K1Q8NGZ2 314 aa1.88□□□□□ -2.11
BRCA1-202ENST00000354071 ZNF480Q8WV37 535 aa1.88□□□□□ -2.11
BRCA1-202ENST00000354071 ZCCHC14Q8WYQ9 949 aaKnown RBP1.88□□□□□ -2.11
BRCA1-202ENST00000354071 ST8SIA4Q92187 359 aa1.88□□□□□ -2.11
BRCA1-202ENST00000354071 RPL10LQ96L21 214 aaKnown RBP1.88□□□□□ -2.11
BRCA1-202ENST00000354071 PWWP2AQ96N64 755 aa1.88□□□□□ -2.11
BRCA1-202ENST00000354071 C11orf54Q9H0W9 315 aaPredicted RBP1.88□□□□□ -2.11
BRCA1-202ENST00000354071 ACAD9Q9H845 621 aa1.88□□□□□ -2.11
BRCA1-202ENST00000354071 LANCL2Q9NS86 450 aa1.88□□□□□ -2.11
BRCA1-202ENST00000354071 PCDHGB4Q9UN71 923 aa1.88□□□□□ -2.11
BRCA1-202ENST00000354071 SNX11Q9Y5W9 270 aa1.88□□□□□ -2.11
BRCA1-202ENST00000354071 VIRMAQ69YN4 1812 aaKnown RBP1.88□□□□□ -2.11
BRCA1-202ENST00000354071 M0QYT0 321 aa1.88□□□□□ -2.11
BRCA1-202ENST00000354071 TOM1O60784 492 aa1.88□□□□□ -2.11
BRCA1-202ENST00000354071 GRPP07492 148 aa1.88□□□□□ -2.11
BRCA1-202ENST00000354071 RNASE1P07998 156 aaKnown RBP1.88□□□□□ -2.11
BRCA1-202ENST00000354071 EGR1P18146 543 aa1.88□□□□□ -2.11
BRCA1-202ENST00000354071 PSMC6P62333 389 aa1.88□□□□□ -2.11
BRCA1-202ENST00000354071 SP2Q02086 613 aa1.88□□□□□ -2.11
BRCA1-202ENST00000354071 FOXO1Q12778 655 aa1.88□□□□□ -2.11
BRCA1-202ENST00000354071 FSTL1Q12841 308 aa1.88□□□□□ -2.11
BRCA1-202ENST00000354071 FHL3Q13643 280 aa1.88□□□□□ -2.11
BRCA1-202ENST00000354071 RAB39AQ14964 217 aa1.88□□□□□ -2.11
BRCA1-202ENST00000354071 CCDC96Q2M329 555 aa1.88□□□□□ -2.11
BRCA1-202ENST00000354071 TANGO2Q6ICL3 276 aa1.88□□□□□ -2.11
BRCA1-202ENST00000354071 ZNF529Q6P280 563 aa1.88□□□□□ -2.11
BRCA1-202ENST00000354071 PLXDC1Q8IUK5 500 aa1.88□□□□□ -2.11
BRCA1-202ENST00000354071 CNTROBQ8N137 903 aa1.88□□□□□ -2.11
BRCA1-202ENST00000354071 FAM46DQ8NEK8 389 aa1.88□□□□□ -2.11
BRCA1-202ENST00000354071 NUDT10Q8NFP7 164 aa1.88□□□□□ -2.11
BRCA1-202ENST00000354071 KBTBD7Q8WVZ9 684 aa1.88□□□□□ -2.11
BRCA1-202ENST00000354071 NUDT11Q96G61 164 aa1.88□□□□□ -2.11
BRCA1-202ENST00000354071 MAGEB5Q9BZ81 275 aa1.88□□□□□ -2.11
BRCA1-202ENST00000354071 GPR63Q9BZJ6 419 aa1.88□□□□□ -2.11
BRCA1-202ENST00000354071 TINAGL1Q9GZM7 467 aaPredicted RBP1.88□□□□□ -2.11
BRCA1-202ENST00000354071 BCO1Q9HAY6 547 aa1.88□□□□□ -2.11
BRCA1-202ENST00000354071 OLA1Q9NTK5 396 aaKnown RBP1.88□□□□□ -2.11
BRCA1-202ENST00000354071 MBNL3Q9NUK0 354 aaKnown RBP1.88□□□□□ -2.11
BRCA1-202ENST00000354071 NCDNQ9UBB6 729 aa1.88□□□□□ -2.11
BRCA1-202ENST00000354071 ORC3Q9UBD5 711 aaPredicted RBP1.88□□□□□ -2.11
BRCA1-202ENST00000354071 FBXO10Q9UK96 956 aa1.88□□□□□ -2.11
BRCA1-202ENST00000354071 NAALADL1Q9UQQ1 740 aa1.88□□□□□ -2.11
BRCA1-202ENST00000354071 PIAS3Q9Y6X2 628 aa1.88□□□□□ -2.11
BRCA1-202ENST00000354071 NWD1Q149M9 1564 aa1.88□□□□□ -2.11
BRCA1-202ENST00000354071 H0Y3Z8 333 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 J3KTA2 159 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 DCLK1O15075 740 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 P4HA2O15460 535 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 THAP12O43422 761 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 FAM155BO75949 473 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 HPXP02790 462 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 ITGA5P08648 1049 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 TXNP10599 105 aaKnown RBP1.87□□□□□ -2.11
BRCA1-202ENST00000354071 BTF3P20290 206 aaKnown RBP1.87□□□□□ -2.11
BRCA1-202ENST00000354071 ENDOUP21128 410 aaKnown RBP1.87□□□□□ -2.11
BRCA1-202ENST00000354071 IL1R2P27930 398 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 DDIT3P35638 169 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 PTDSS1P48651 473 aaKnown RBP1.87□□□□□ -2.11
BRCA1-202ENST00000354071 POLD2P49005 469 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 GPR15P49685 360 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 CTXN1P60606 82 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 NKX3-2P78367 333 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 POU5F1Q01860 360 aaKnown RBP1.87□□□□□ -2.11
BRCA1-202ENST00000354071 GALNTL6Q49A17 601 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 PLA1AQ53H76 456 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 UTP14CQ5TAP6 766 aaKnown RBP1.87□□□□□ -2.11
BRCA1-202ENST00000354071 KIAA1324Q6UXG2 1013 aaKnown RBP1.87□□□□□ -2.11
BRCA1-202ENST00000354071 KRTAP1-3Q8IUG1 177 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 ANKRD53Q8N9V6 530 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 CYP2W1Q8TAV3 490 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 TBC1D22AQ8WUA7 517 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 MYLIPQ8WY64 445 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 SYTL4Q96C24 671 aaPredicted RBP1.87□□□□□ -2.11
BRCA1-202ENST00000354071 PAWRQ96IZ0 340 aaKnown RBP1.87□□□□□ -2.11
BRCA1-202ENST00000354071 ZBTB45Q96K62 511 aaPredicted RBP1.87□□□□□ -2.11
BRCA1-202ENST00000354071 KATNBL1Q9H079 304 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 WDCPQ9H6R7 721 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 DLL4Q9NR61 685 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 PCDHB16Q9NRJ7 776 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 RASSF1Q9NS23 344 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 GIMAP2Q9UG22 337 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 MTO1Q9Y2Z2 717 aaKnown RBP1.87□□□□□ -2.11
BRCA1-202ENST00000354071 NUB1Q9Y5A7 615 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 OAS3Q9Y6K5 1087 aaKnown RBP1.87□□□□□ -2.11
BRCA1-202ENST00000354071 ZNF608Q9ULD9 1512 aaPredicted RBP1.87□□□□□ -2.11
BRCA1-202ENST00000354071 LRP6O75581 1613 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 LRRC7Q96NW7 1537 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 A0A0G2JNJ9 132 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 CLCA1A8K7I4 914 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 RTN3O95197 1032 aaPredicted RBP1.87□□□□□ -2.11
BRCA1-202ENST00000354071 VNN1O95497 513 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 DNTTP04053 509 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 ANXA1P04083 346 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms