RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 TM7SF2O76062 418 aa8□□□□□ -1.13
BRCA1-201ENST00000352993 CAMTA2O94983 1202 aa8□□□□□ -1.13
BRCA1-201ENST00000352993 CYP1A2P05177 515 aa8□□□□□ -1.13
BRCA1-201ENST00000352993 AKR1B1P15121 316 aa8□□□□□ -1.13
BRCA1-201ENST00000352993 CYP11B1P15538 503 aa8□□□□□ -1.13
BRCA1-201ENST00000352993 SMARCA1P28370 1054 aa8□□□□□ -1.13
BRCA1-201ENST00000352993 HOXA13P31271 388 aaPredicted RBP8□□□□□ -1.13
BRCA1-201ENST00000352993 SLC1A1P43005 524 aa8□□□□□ -1.13
BRCA1-201ENST00000352993 CRKLP46109 303 aaKnown RBP8□□□□□ -1.13
BRCA1-201ENST00000352993 AQP5P55064 265 aa8□□□□□ -1.13
BRCA1-201ENST00000352993 KRT72Q14CN4 511 aa8□□□□□ -1.13
BRCA1-201ENST00000352993 EFHC1Q5JVL4 640 aa8□□□□□ -1.13
BRCA1-201ENST00000352993 ARPINQ7Z6K5 226 aa8□□□□□ -1.13
BRCA1-201ENST00000352993 ZNF554Q86TJ5 538 aa8□□□□□ -1.13
BRCA1-201ENST00000352993 GADD45GIP1Q8TAE8 222 aaPredicted RBP8□□□□□ -1.13
BRCA1-201ENST00000352993 CYP2W1Q8TAV3 490 aa8□□□□□ -1.13
BRCA1-201ENST00000352993 GSDMBQ8TAX9 411 aa8□□□□□ -1.13
BRCA1-201ENST00000352993 LZICQ8WZA0 190 aa8□□□□□ -1.13
BRCA1-201ENST00000352993 SKA1Q96BD8 255 aa8□□□□□ -1.13
BRCA1-201ENST00000352993 ACSF2Q96CM8 615 aaPredicted RBP8□□□□□ -1.13
BRCA1-201ENST00000352993 ANKRD2Q9GZV1 360 aa8□□□□□ -1.13
BRCA1-201ENST00000352993 VPS11Q9H270 941 aa8□□□□□ -1.13
BRCA1-201ENST00000352993 SLC24A2Q9UI40 661 aa8□□□□□ -1.13
BRCA1-201ENST00000352993 ADCY3O60266 1144 aa8□□□□□ -1.13
BRCA1-201ENST00000352993 MAGEC1O60732 1142 aa8□□□□□ -1.13
BRCA1-201ENST00000352993 OATP04181 439 aa8□□□□□ -1.13
BRCA1-201ENST00000352993 FUT4P22083 530 aa8□□□□□ -1.13
BRCA1-201ENST00000352993 RFX1P22670 979 aa8□□□□□ -1.13
BRCA1-201ENST00000352993 YWHAGP61981 247 aaKnown RBP eCLIP8□□□□□ -1.13
BRCA1-201ENST00000352993 MAP3K10Q02779 954 aa8□□□□□ -1.13
BRCA1-201ENST00000352993 FOLH1Q04609 750 aa8□□□□□ -1.13
BRCA1-201ENST00000352993 DCTN2Q13561 401 aaKnown RBP8□□□□□ -1.13
BRCA1-201ENST00000352993 UBAP2LQ14157 1087 aaKnown RBP8□□□□□ -1.13
BRCA1-201ENST00000352993 BMT2Q1RMZ1 405 aa8□□□□□ -1.13
BRCA1-201ENST00000352993 ATP13A4Q4VNC1 1196 aa8□□□□□ -1.13
BRCA1-201ENST00000352993 TCHHL1Q5QJ38 904 aaPredicted RBP8□□□□□ -1.13
BRCA1-201ENST00000352993 C16orf86Q6ZW13 317 aa8□□□□□ -1.13
BRCA1-201ENST00000352993 HSPBAP1Q96EW2 488 aa8□□□□□ -1.13
BRCA1-201ENST00000352993 C11orf70Q9BRQ4 267 aa8□□□□□ -1.13
BRCA1-201ENST00000352993 MECRQ9BV79 373 aa8□□□□□ -1.13
BRCA1-201ENST00000352993 C10orf88Q9H8K7 445 aa8□□□□□ -1.13
BRCA1-201ENST00000352993 S100A14Q9HCY8 104 aa8□□□□□ -1.13
BRCA1-201ENST00000352993 RAB20Q9NX57 234 aa8□□□□□ -1.13
BRCA1-201ENST00000352993 MTMR4Q9NYA4 1195 aa8□□□□□ -1.13
BRCA1-201ENST00000352993 EURLQ9NYK6 297 aa8□□□□□ -1.13
BRCA1-201ENST00000352993 PTTG2Q9NZH5 202 aa8□□□□□ -1.13
BRCA1-201ENST00000352993 PKD2L1Q9P0L9 805 aa8□□□□□ -1.13
BRCA1-201ENST00000352993 DLEC1Q9Y238 1755 aa8□□□□□ -1.13
BRCA1-201ENST00000352993 DCAF8L1A6NGE4 600 aa8□□□□□ -1.13
BRCA1-201ENST00000352993 PRR5-ARHGAP8B1AHC4 643 aa8□□□□□ -1.13
BRCA1-201ENST00000352993 DDX39AO00148 427 aaKnown RBP8□□□□□ -1.13
BRCA1-201ENST00000352993 COPEO14579 308 aa8□□□□□ -1.13
BRCA1-201ENST00000352993 KRT1P04264 644 aa8□□□□□ -1.13
BRCA1-201ENST00000352993 PMLP29590 882 aa8□□□□□ -1.13
BRCA1-201ENST00000352993 NSFP46459 744 aaKnown RBP8□□□□□ -1.13
BRCA1-201ENST00000352993 SERPINB8P50452 374 aa8□□□□□ -1.13
BRCA1-201ENST00000352993 RAP1GDS1P52306 607 aa8□□□□□ -1.13
BRCA1-201ENST00000352993 ARHGAP8P85298 464 aa8□□□□□ -1.13
BRCA1-201ENST00000352993 PPIDQ08752 370 aaKnown RBP8□□□□□ -1.13
BRCA1-201ENST00000352993 ZNF543Q08ER8 600 aa8□□□□□ -1.13
BRCA1-201ENST00000352993 PDE1CQ14123 709 aaPredicted RBP8□□□□□ -1.13
BRCA1-201ENST00000352993 QRICH1Q2TAL8 776 aa8□□□□□ -1.13
BRCA1-201ENST00000352993 ACAD10Q6JQN1 1059 aa8□□□□□ -1.13
BRCA1-201ENST00000352993 KLHDC10Q6PID8 442 aa8□□□□□ -1.13
BRCA1-201ENST00000352993 TSHZ1Q6ZSZ6 1077 aa8□□□□□ -1.13
BRCA1-201ENST00000352993 PDSS2Q86YH6 399 aa8□□□□□ -1.13
BRCA1-201ENST00000352993 RHOT1Q8IXI2 618 aa8□□□□□ -1.13
BRCA1-201ENST00000352993 ATP11CQ8NB49 1132 aa8□□□□□ -1.13
BRCA1-201ENST00000352993 CAMKK2Q96RR4 588 aa8□□□□□ -1.13
BRCA1-201ENST00000352993 TMEM121Q9BTD3 319 aa8□□□□□ -1.13
BRCA1-201ENST00000352993 MRPL1Q9BYD6 325 aaKnown RBP8□□□□□ -1.13
BRCA1-201ENST00000352993 WWP1Q9H0M0 922 aa8□□□□□ -1.13
BRCA1-201ENST00000352993 ZNF395Q9H8N7 513 aaPredicted RBP8□□□□□ -1.13
BRCA1-201ENST00000352993 STK32BQ9NY57 414 aa8□□□□□ -1.13
BRCA1-201ENST00000352993 LZTS1Q9Y250 596 aa8□□□□□ -1.13
BRCA1-201ENST00000352993 GMEB1Q9Y692 573 aa8□□□□□ -1.13
BRCA1-201ENST00000352993 TNS2Q63HR2 1409 aa8□□□□□ -1.13
BRCA1-201ENST00000352993 LOC100653049A0A140TA62 436 aa7.99□□□□□ -1.13
BRCA1-201ENST00000352993 ARHGAP10A1A4S6 786 aa7.99□□□□□ -1.13
BRCA1-201ENST00000352993 ARHGEF35A5YM69 484 aa7.99□□□□□ -1.13
BRCA1-201ENST00000352993 CAPN8A6NHC0 703 aa7.99□□□□□ -1.13
BRCA1-201ENST00000352993 EML1O00423 815 aa7.99□□□□□ -1.13
BRCA1-201ENST00000352993 TM9SF1O15321 606 aa7.99□□□□□ -1.13
BRCA1-201ENST00000352993 EIF3DO15371 548 aaKnown RBP eCLIP7.99□□□□□ -1.13
BRCA1-201ENST00000352993 KRT34O76011 436 aa7.99□□□□□ -1.13
BRCA1-201ENST00000352993 DLDP09622 509 aaKnown RBP7.99□□□□□ -1.13
BRCA1-201ENST00000352993 RAG1P15918 1043 aa7.99□□□□□ -1.13
BRCA1-201ENST00000352993 TAL1P17542 331 aaPredicted RBP7.99□□□□□ -1.13
BRCA1-201ENST00000352993 RPL5P46777 297 aaKnown RBP7.99□□□□□ -1.13
BRCA1-201ENST00000352993 UBXN2AP68543 259 aa7.99□□□□□ -1.13
BRCA1-201ENST00000352993 PTK7Q13308 1070 aa7.99□□□□□ -1.13
BRCA1-201ENST00000352993 CNGA3Q16281 694 aa7.99□□□□□ -1.13
BRCA1-201ENST00000352993 KCTD21Q4G0X4 260 aa7.99□□□□□ -1.13
BRCA1-201ENST00000352993 MAP3K21Q5TCX8 1036 aa7.99□□□□□ -1.13
BRCA1-201ENST00000352993 GRAMD4Q6IC98 578 aa7.99□□□□□ -1.13
BRCA1-201ENST00000352993 CLEC4GQ6UXB4 293 aa7.99□□□□□ -1.13
BRCA1-201ENST00000352993 ANO5Q75V66 913 aa7.99□□□□□ -1.13
BRCA1-201ENST00000352993 ZNF720Q7Z2F6 126 aa7.99□□□□□ -1.13
BRCA1-201ENST00000352993 SHKBP1Q8TBC3 707 aa7.99□□□□□ -1.13
BRCA1-201ENST00000352993 PRPF18Q99633 342 aaKnown RBP7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms