RNA–Protein interactions for RNA: ENST00000352483.3

RIPK4-202, Transcript of receptor interacting serine/threonine kinase 4, humanhuman

TSL 5 BASIC

Gene RIPK4, Length 4,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4-202ENST00000352483 CASTOR2A6NHX0 329 aa13.7□□□□□ -0.22
RIPK4-202ENST00000352483 RBP3P10745 1247 aa13.7□□□□□ -0.22
RIPK4-202ENST00000352483 CCDC130P13994 396 aa13.7□□□□□ -0.22
RIPK4-202ENST00000352483 RFC5P40937 340 aa13.7□□□□□ -0.22
RIPK4-202ENST00000352483 PSMD6Q15008 389 aa13.7□□□□□ -0.22
RIPK4-202ENST00000352483 PPP2R5EQ16537 467 aa13.7□□□□□ -0.22
RIPK4-202ENST00000352483 CCL14Q16627 93 aa13.7□□□□□ -0.22
RIPK4-202ENST00000352483 EML3Q32P44 896 aa13.7□□□□□ -0.22
RIPK4-202ENST00000352483 FAM117BQ6P1L5 589 aa13.7□□□□□ -0.22
RIPK4-202ENST00000352483 APBB1IPQ7Z5R6 666 aaPredicted RBP13.7□□□□□ -0.22
RIPK4-202ENST00000352483 SAMD3Q8N6K7 520 aa13.7□□□□□ -0.22
RIPK4-202ENST00000352483 ACTL9Q8TC94 416 aa13.7□□□□□ -0.22
RIPK4-202ENST00000352483 TMC2Q8TDI7 906 aa13.7□□□□□ -0.22
RIPK4-202ENST00000352483 FAF2Q96CS3 445 aa13.7□□□□□ -0.22
RIPK4-202ENST00000352483 FAM167BQ9BTA0 163 aa13.7□□□□□ -0.22
RIPK4-202ENST00000352483 TMEM120BA0PK00 339 aa13.7□□□□□ -0.22
RIPK4-202ENST00000352483 ZBED1O96006 694 aa13.7□□□□□ -0.22
RIPK4-202ENST00000352483 EIF3EP60228 445 aaKnown RBP13.7□□□□□ -0.22
RIPK4-202ENST00000352483 RUNDC3BQ96NL0 473 aa13.7□□□□□ -0.22
RIPK4-202ENST00000352483 C2orf40Q9H1Z8 148 aa13.7□□□□□ -0.22
RIPK4-202ENST00000352483 C12orf65Q9H3J6 166 aaKnown RBP13.7□□□□□ -0.22
RIPK4-202ENST00000352483 NXF3Q9H4D5 531 aaKnown RBP13.7□□□□□ -0.22
RIPK4-202ENST00000352483 IP6K2Q9UHH9 426 aa13.7□□□□□ -0.22
RIPK4-202ENST00000352483 PODXLO00592 558 aa13.69□□□□□ -0.22
RIPK4-202ENST00000352483 DDX3YO15523 660 aaKnown RBP13.69□□□□□ -0.22
RIPK4-202ENST00000352483 KCNN4O15554 427 aa13.69□□□□□ -0.22
RIPK4-202ENST00000352483 CD48P09326 243 aa13.69□□□□□ -0.22
RIPK4-202ENST00000352483 C6orf118Q5T5N4 469 aa13.69□□□□□ -0.22
RIPK4-202ENST00000352483 RWDD4Q6NW29 188 aaKnown RBP13.69□□□□□ -0.22
RIPK4-202ENST00000352483 XRRA1Q6P2D8 792 aa13.69□□□□□ -0.22
RIPK4-202ENST00000352483 CTU1Q7Z7A3 348 aaKnown RBP13.69□□□□□ -0.22
RIPK4-202ENST00000352483 HIPK4Q8NE63 616 aa13.69□□□□□ -0.22
RIPK4-202ENST00000352483 LMO3Q8TAP4 145 aa13.69□□□□□ -0.22
RIPK4-202ENST00000352483 GRK7Q8WTQ7 553 aa13.69□□□□□ -0.22
RIPK4-202ENST00000352483 L3MBTL3Q96JM7 780 aaPredicted RBP13.69□□□□□ -0.22
RIPK4-202ENST00000352483 ZFP42Q96MM3 310 aa13.69□□□□□ -0.22
RIPK4-202ENST00000352483 NOCTQ9UK39 431 aaKnown RBP13.69□□□□□ -0.22
RIPK4-202ENST00000352483 A0A0B4J269 797 aa13.69□□□□□ -0.22
RIPK4-202ENST00000352483 E5RJQ4 531 aa13.69□□□□□ -0.22
RIPK4-202ENST00000352483 LCA5LO95447 670 aa13.69□□□□□ -0.22
RIPK4-202ENST00000352483 ATP2A2P16615 1042 aaKnown RBP13.69□□□□□ -0.22
RIPK4-202ENST00000352483 SDC4P31431 198 aa13.69□□□□□ -0.22
RIPK4-202ENST00000352483 SESN2P58004 480 aaPredicted RBP13.69□□□□□ -0.22
RIPK4-202ENST00000352483 PTENP60484 403 aa13.69□□□□□ -0.22
RIPK4-202ENST00000352483 YWHAEP62258 255 aaKnown RBP13.69□□□□□ -0.22
RIPK4-202ENST00000352483 OTUD4Q01804 1114 aaKnown RBP13.69□□□□□ -0.22
RIPK4-202ENST00000352483 MAMLD1Q13495 774 aa13.69□□□□□ -0.22
RIPK4-202ENST00000352483 DCAF6Q58WW2 860 aa13.69□□□□□ -0.22
RIPK4-202ENST00000352483 TMC3Q7Z5M5 1100 aa13.69□□□□□ -0.22
RIPK4-202ENST00000352483 SLC9A9Q8IVB4 645 aa13.69□□□□□ -0.22
RIPK4-202ENST00000352483 PPM1NQ8N819 430 aa13.69□□□□□ -0.22
RIPK4-202ENST00000352483 CCDC110Q8TBZ0 833 aa13.69□□□□□ -0.22
RIPK4-202ENST00000352483 AGR3Q8TD06 166 aa13.69□□□□□ -0.22
RIPK4-202ENST00000352483 USP33Q8TEY7 942 aa13.69□□□□□ -0.22
RIPK4-202ENST00000352483 TGS1Q96RS0 853 aaKnown RBP13.69□□□□□ -0.22
RIPK4-202ENST00000352483 ACO2Q99798 780 aaKnown RBP13.69□□□□□ -0.22
RIPK4-202ENST00000352483 GCOM2Q9BZD3 368 aaPredicted RBP13.69□□□□□ -0.22
RIPK4-202ENST00000352483 C17orf75Q9HAS0 396 aa13.69□□□□□ -0.22
RIPK4-202ENST00000352483 SMYD2Q9NRG4 433 aa13.69□□□□□ -0.22
RIPK4-202ENST00000352483 SCAMP3O14828 347 aaKnown RBP13.69□□□□□ -0.22
RIPK4-202ENST00000352483 PPEF2O14830 753 aa13.69□□□□□ -0.22
RIPK4-202ENST00000352483 POMCP01189 267 aa13.69□□□□□ -0.22
RIPK4-202ENST00000352483 CALB1P05937 261 aa13.69□□□□□ -0.22
RIPK4-202ENST00000352483 SRGAP2BP0DMP2 458 aa13.69□□□□□ -0.22
RIPK4-202ENST00000352483 SLMAPQ14BN4 828 aa13.69□□□□□ -0.22
RIPK4-202ENST00000352483 MDH1BQ5I0G3 518 aa13.69□□□□□ -0.22
RIPK4-202ENST00000352483 ATL2Q8NHH9 583 aa13.69□□□□□ -0.22
RIPK4-202ENST00000352483 P3H4Q92791 437 aa13.69□□□□□ -0.22
RIPK4-202ENST00000352483 TRIM11Q96F44 468 aa13.69□□□□□ -0.22
RIPK4-202ENST00000352483 XPO6Q96QU8 1125 aaKnown RBP13.69□□□□□ -0.22
RIPK4-202ENST00000352483 TIPINQ9BVW5 301 aa13.69□□□□□ -0.22
RIPK4-202ENST00000352483 DHX33Q9H6R0 707 aaKnown RBP13.69□□□□□ -0.22
RIPK4-202ENST00000352483 NMRK2Q9NPI5 230 aa13.69□□□□□ -0.22
RIPK4-202ENST00000352483 RAB6BQ9NRW1 208 aa13.69□□□□□ -0.22
RIPK4-202ENST00000352483 TSPAN16Q9UKR8 245 aa13.69□□□□□ -0.22
RIPK4-202ENST00000352483 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.69□□□□□ -0.22
RIPK4-202ENST00000352483 NEU2Q9Y3R4 380 aa13.69□□□□□ -0.22
RIPK4-202ENST00000352483 POLR2AP24928 1970 aaKnown RBP13.69□□□□□ -0.22
RIPK4-202ENST00000352483 IQCA1LA6NCM1 817 aa13.68□□□□□ -0.22
RIPK4-202ENST00000352483 MED7O43513 233 aa13.68□□□□□ -0.22
RIPK4-202ENST00000352483 PLA2G6O60733 806 aa13.68□□□□□ -0.22
RIPK4-202ENST00000352483 GZMAP12544 262 aa13.68□□□□□ -0.22
RIPK4-202ENST00000352483 RFX1P22670 979 aa13.68□□□□□ -0.22
RIPK4-202ENST00000352483 HNRNPH1P31943 449 aaKnown RBP13.68□□□□□ -0.22
RIPK4-202ENST00000352483 ADCY2Q08462 1091 aa13.68□□□□□ -0.22
RIPK4-202ENST00000352483 APOL2Q9BQE5 337 aa13.68□□□□□ -0.22
RIPK4-202ENST00000352483 TULP2O00295 520 aa13.68□□□□□ -0.22
RIPK4-202ENST00000352483 CLDN5O00501 218 aa13.68□□□□□ -0.22
RIPK4-202ENST00000352483 P4HA2O15460 535 aa13.68□□□□□ -0.22
RIPK4-202ENST00000352483 ATXN1P54253 815 aaKnown RBP13.68□□□□□ -0.22
RIPK4-202ENST00000352483 DNAJC3Q13217 504 aa13.68□□□□□ -0.22
RIPK4-202ENST00000352483 CHADLQ6NUI6 762 aa13.68□□□□□ -0.22
RIPK4-202ENST00000352483 GLIS1Q8NBF1 620 aa13.68□□□□□ -0.22
RIPK4-202ENST00000352483 RDM1Q8NG50 284 aa13.68□□□□□ -0.22
RIPK4-202ENST00000352483 N4BP2L2Q92802 583 aaPredicted RBP13.68□□□□□ -0.22
RIPK4-202ENST00000352483 RSRC1Q96IZ7 334 aaKnown RBP13.68□□□□□ -0.22
RIPK4-202ENST00000352483 TWNKQ96RR1 684 aa13.68□□□□□ -0.22
RIPK4-202ENST00000352483 GDF3Q9NR23 364 aa13.68□□□□□ -0.22
RIPK4-202ENST00000352483 HUS1O60921 280 aa13.68□□□□□ -0.22
RIPK4-202ENST00000352483 BAG2O95816 211 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms