RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 SETSIPP0DME0 302 aa7.32□□□□□ -1.24
TRIM55-203ENST00000350034 PTPN7P35236 360 aa7.32□□□□□ -1.24
TRIM55-203ENST00000350034 COILP38432 576 aaPredicted RBP7.32□□□□□ -1.24
TRIM55-203ENST00000350034 NDST1P52848 882 aa7.32□□□□□ -1.24
TRIM55-203ENST00000350034 MRPS6P82932 125 aaKnown RBP7.32□□□□□ -1.24
TRIM55-203ENST00000350034 CAP1Q01518 475 aa7.32□□□□□ -1.24
TRIM55-203ENST00000350034 DR1Q01658 176 aa7.32□□□□□ -1.24
TRIM55-203ENST00000350034 MGAT3Q09327 533 aa7.32□□□□□ -1.24
TRIM55-203ENST00000350034 MYO1EQ12965 1108 aa7.32□□□□□ -1.24
TRIM55-203ENST00000350034 PIGHQ14442 188 aaPredicted RBP7.32□□□□□ -1.24
TRIM55-203ENST00000350034 STILQ15468 1287 aa7.32□□□□□ -1.24
TRIM55-203ENST00000350034 TERF2Q15554 542 aa7.32□□□□□ -1.24
TRIM55-203ENST00000350034 NBPF20Q3BBV1 942 aa7.32□□□□□ -1.24
TRIM55-203ENST00000350034 GNASQ5JWF2 1037 aa7.32□□□□□ -1.24
TRIM55-203ENST00000350034 ARHGAP17Q68EM7 881 aa7.32□□□□□ -1.24
TRIM55-203ENST00000350034 SERINC5Q86VE9 423 aa7.32□□□□□ -1.24
TRIM55-203ENST00000350034 FAM228AQ86W67 206 aa7.32□□□□□ -1.24
TRIM55-203ENST00000350034 UNC93AQ86WB7 457 aa7.32□□□□□ -1.24
TRIM55-203ENST00000350034 DDX42Q86XP3 938 aaKnown RBP eCLIP7.32□□□□□ -1.24
TRIM55-203ENST00000350034 XYLT1Q86Y38 959 aa7.32□□□□□ -1.24
TRIM55-203ENST00000350034 REM2Q8IYK8 340 aaPredicted RBP7.32□□□□□ -1.24
TRIM55-203ENST00000350034 MAIP1Q8WWC4 291 aa7.32□□□□□ -1.24
TRIM55-203ENST00000350034 IFT81Q8WYA0 676 aa7.32□□□□□ -1.24
TRIM55-203ENST00000350034 PIK3R5Q8WYR1 880 aa7.32□□□□□ -1.24
TRIM55-203ENST00000350034 MAGOHBQ96A72 148 aaKnown RBP7.32□□□□□ -1.24
TRIM55-203ENST00000350034 C18orf25Q96B23 403 aaPredicted RBP7.32□□□□□ -1.24
TRIM55-203ENST00000350034 C18orf8Q96DM3 657 aa7.32□□□□□ -1.24
TRIM55-203ENST00000350034 GDAP1L1Q96MZ0 367 aa7.32□□□□□ -1.24
TRIM55-203ENST00000350034 CPXM1Q96SM3 734 aa7.32□□□□□ -1.24
TRIM55-203ENST00000350034 ERP44Q9BS26 406 aa7.32□□□□□ -1.24
TRIM55-203ENST00000350034 HERPUD2Q9BSE4 406 aa7.32□□□□□ -1.24
TRIM55-203ENST00000350034 TRIM51Q9BSJ1 452 aa7.32□□□□□ -1.24
TRIM55-203ENST00000350034 NT5C1AQ9BXI3 368 aa7.32□□□□□ -1.24
TRIM55-203ENST00000350034 CFHR5Q9BXR6 569 aa7.32□□□□□ -1.24
TRIM55-203ENST00000350034 RAB17Q9H0T7 212 aa7.32□□□□□ -1.24
TRIM55-203ENST00000350034 NEUROG2Q9H2A3 272 aa7.32□□□□□ -1.24
TRIM55-203ENST00000350034 PLEKHA4Q9H4M7 779 aa7.32□□□□□ -1.24
TRIM55-203ENST00000350034 ZDHHC18Q9NUE0 388 aa7.32□□□□□ -1.24
TRIM55-203ENST00000350034 GDAP2Q9NXN4 497 aa7.32□□□□□ -1.24
TRIM55-203ENST00000350034 TJP2Q9UDY2 1190 aa7.32□□□□□ -1.24
TRIM55-203ENST00000350034 TUBGCP4Q9UGJ1 667 aa7.32□□□□□ -1.24
TRIM55-203ENST00000350034 ABT1Q9ULW3 272 aaKnown RBP7.32□□□□□ -1.24
TRIM55-203ENST00000350034 PIN4Q9Y237 131 aaKnown RBP7.32□□□□□ -1.24
TRIM55-203ENST00000350034 GINS2Q9Y248 185 aa7.32□□□□□ -1.24
TRIM55-203ENST00000350034 UTP11Q9Y3A2 253 aaKnown RBP7.32□□□□□ -1.24
TRIM55-203ENST00000350034 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.32□□□□□ -1.24
TRIM55-203ENST00000350034 HES2Q9Y543 173 aa7.32□□□□□ -1.24
TRIM55-203ENST00000350034 TRPV2Q9Y5S1 764 aa7.32□□□□□ -1.24
TRIM55-203ENST00000350034 F8VP50 259 aa7.31□□□□□ -1.24
TRIM55-203ENST00000350034 DAPK3O43293 454 aa7.31□□□□□ -1.24
TRIM55-203ENST00000350034 XPOTO43592 962 aaKnown RBP7.31□□□□□ -1.24
TRIM55-203ENST00000350034 PGK1P00558 417 aa7.31□□□□□ -1.24
TRIM55-203ENST00000350034 RARBP10826 455 aa7.31□□□□□ -1.24
TRIM55-203ENST00000350034 VCANP13611 3396 aa7.31□□□□□ -1.24
TRIM55-203ENST00000350034 LRPAP1P30533 357 aa7.31□□□□□ -1.24
TRIM55-203ENST00000350034 GBP1P32455 592 aa7.31□□□□□ -1.24
TRIM55-203ENST00000350034 RFC1P35251 1148 aaPredicted RBP7.31□□□□□ -1.24
TRIM55-203ENST00000350034 GGCXP38435 758 aa7.31□□□□□ -1.24
TRIM55-203ENST00000350034 PNPLA4P41247 253 aa7.31□□□□□ -1.24
TRIM55-203ENST00000350034 RPL34P49207 117 aaKnown RBP7.31□□□□□ -1.24
TRIM55-203ENST00000350034 COPS2P61201 443 aa7.31□□□□□ -1.24
TRIM55-203ENST00000350034 PSMC1P62191 440 aaKnown RBP7.31□□□□□ -1.24
TRIM55-203ENST00000350034 PRKCZQ05513 592 aa7.31□□□□□ -1.24
TRIM55-203ENST00000350034 CACNB2Q08289 660 aaPredicted RBP7.31□□□□□ -1.24
TRIM55-203ENST00000350034 TRIM32Q13049 653 aa7.31□□□□□ -1.24
TRIM55-203ENST00000350034 NOGQ13253 232 aa7.31□□□□□ -1.24
TRIM55-203ENST00000350034 PDCLQ13371 301 aa7.31□□□□□ -1.24
TRIM55-203ENST00000350034 ORC1Q13415 861 aa7.31□□□□□ -1.24
TRIM55-203ENST00000350034 TAZQ16635 292 aa7.31□□□□□ -1.24
TRIM55-203ENST00000350034 SOWAHAQ2M3V2 549 aa7.31□□□□□ -1.24
TRIM55-203ENST00000350034 SGO2Q562F6 1265 aa7.31□□□□□ -1.24
TRIM55-203ENST00000350034 SPDYCQ5MJ68 293 aa7.31□□□□□ -1.24
TRIM55-203ENST00000350034 CYP4A22Q5TCH4 519 aa7.31□□□□□ -1.24
TRIM55-203ENST00000350034 GDF6Q6KF10 455 aaPredicted RBP7.31□□□□□ -1.24
TRIM55-203ENST00000350034 CCDC137Q6PK04 289 aaKnown RBP7.31□□□□□ -1.24
TRIM55-203ENST00000350034 ZDHHC24Q6UX98 284 aa7.31□□□□□ -1.24
TRIM55-203ENST00000350034 CXCL17Q6UXB2 119 aa7.31□□□□□ -1.24
TRIM55-203ENST00000350034 SYDE1Q6ZW31 735 aaPredicted RBP7.31□□□□□ -1.24
TRIM55-203ENST00000350034 POLNQ7Z5Q5 900 aa7.31□□□□□ -1.24
TRIM55-203ENST00000350034 ANKS1BQ7Z6G8 1248 aa7.31□□□□□ -1.24
TRIM55-203ENST00000350034 ADAT2Q7Z6V5 191 aaKnown RBP7.31□□□□□ -1.24
TRIM55-203ENST00000350034 RCOR2Q8IZ40 523 aa7.31□□□□□ -1.24
TRIM55-203ENST00000350034 CRYBG2Q8N1P7 616 aa7.31□□□□□ -1.24
TRIM55-203ENST00000350034 ARFGAP1Q8N6T3 406 aa7.31□□□□□ -1.24
TRIM55-203ENST00000350034 ARRDC4Q8NCT1 418 aa7.31□□□□□ -1.24
TRIM55-203ENST00000350034 STK32AQ8WU08 396 aa7.31□□□□□ -1.24
TRIM55-203ENST00000350034 WNT8BQ93098 351 aa7.31□□□□□ -1.24
TRIM55-203ENST00000350034 HEXIM2Q96MH2 286 aaKnown RBP7.31□□□□□ -1.24
TRIM55-203ENST00000350034 MCEEQ96PE7 176 aa7.31□□□□□ -1.24
TRIM55-203ENST00000350034 MRPL45Q9BRJ2 306 aaKnown RBP7.31□□□□□ -1.24
TRIM55-203ENST00000350034 SLC4A5Q9BY07 1137 aa7.31□□□□□ -1.24
TRIM55-203ENST00000350034 FAM129AQ9BZQ8 928 aa7.31□□□□□ -1.24
TRIM55-203ENST00000350034 DCLK3Q9C098 648 aa7.31□□□□□ -1.24
TRIM55-203ENST00000350034 SENP6Q9GZR1 1112 aaPredicted RBP7.31□□□□□ -1.24
TRIM55-203ENST00000350034 CHST12Q9NRB3 414 aa7.31□□□□□ -1.24
TRIM55-203ENST00000350034 HOMER3Q9NSC5 361 aa7.31□□□□□ -1.24
TRIM55-203ENST00000350034 GRHL1Q9NZI5 618 aa7.31□□□□□ -1.24
TRIM55-203ENST00000350034 RASAL2Q9UJF2 1139 aa7.31□□□□□ -1.24
TRIM55-203ENST00000350034 NEU2Q9Y3R4 380 aa7.31□□□□□ -1.24
TRIM55-203ENST00000350034 IPPQ9Y573 584 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms