RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 TJP3O95049 919 aa17.63■□□□□ 0.41
SAMM50-201ENST00000350028 ZNF865P0CJ78 1059 aaPredicted RBP17.63■□□□□ 0.41
SAMM50-201ENST00000350028 CYP2C9P11712 490 aa17.63■□□□□ 0.41
SAMM50-201ENST00000350028 FGFR4P22455 802 aa17.63■□□□□ 0.41
SAMM50-201ENST00000350028 AXLP30530 894 aa17.63■□□□□ 0.41
SAMM50-201ENST00000350028 HOXA11P31270 313 aaPredicted RBP17.63■□□□□ 0.41
SAMM50-201ENST00000350028 GABRB2P47870 512 aa17.63■□□□□ 0.41
SAMM50-201ENST00000350028 GNGT1P63211 74 aa17.63■□□□□ 0.41
SAMM50-201ENST00000350028 MFSD10Q14728 455 aa17.63■□□□□ 0.41
SAMM50-201ENST00000350028 ODF2Q5BJF6 829 aa17.63■□□□□ 0.41
SAMM50-201ENST00000350028 ZFYVE27Q5T4F4 411 aa17.63■□□□□ 0.41
SAMM50-201ENST00000350028 POLNQ7Z5Q5 900 aa17.63■□□□□ 0.41
SAMM50-201ENST00000350028 HOOK3Q86VS8 718 aa17.63■□□□□ 0.41
SAMM50-201ENST00000350028 BBOF1Q8ND07 529 aa17.63■□□□□ 0.41
SAMM50-201ENST00000350028 KAT2BQ92831 832 aa17.63■□□□□ 0.41
SAMM50-201ENST00000350028 HEXIM2Q96MH2 286 aaKnown RBP17.63■□□□□ 0.41
SAMM50-201ENST00000350028 EPB41L4BQ9H329 900 aa17.63■□□□□ 0.41
SAMM50-201ENST00000350028 RALGAPA2Q2PPJ7 1873 aa17.63■□□□□ 0.41
SAMM50-201ENST00000350028 PCNTO95613 3336 aa17.63■□□□□ 0.41
SAMM50-201ENST00000350028 DARSP14868 501 aaKnown RBP17.62■□□□□ 0.41
SAMM50-201ENST00000350028 PSMA2P25787 234 aa17.62■□□□□ 0.41
SAMM50-201ENST00000350028 YARSP54577 528 aaKnown RBP17.62■□□□□ 0.41
SAMM50-201ENST00000350028 HUNKP57058 714 aa17.62■□□□□ 0.41
SAMM50-201ENST00000350028 STILQ15468 1287 aa17.62■□□□□ 0.41
SAMM50-201ENST00000350028 KRT71Q3SY84 523 aa17.62■□□□□ 0.41
SAMM50-201ENST00000350028 ATP13A4Q4VNC1 1196 aa17.62■□□□□ 0.41
SAMM50-201ENST00000350028 DNAJC21Q5F1R6 531 aaKnown RBP17.62■□□□□ 0.41
SAMM50-201ENST00000350028 NOTUMQ6P988 496 aa17.62■□□□□ 0.41
SAMM50-201ENST00000350028 DRICH1Q6PGQ1 229 aaPredicted RBP17.62■□□□□ 0.41
SAMM50-201ENST00000350028 SPOCD1Q6ZMY3 1216 aa17.62■□□□□ 0.41
SAMM50-201ENST00000350028 SAPCD2Q86UD0 394 aa17.62■□□□□ 0.41
SAMM50-201ENST00000350028 TLK2Q86UE8 772 aa17.62■□□□□ 0.41
SAMM50-201ENST00000350028 XYLT1Q86Y38 959 aa17.62■□□□□ 0.41
SAMM50-201ENST00000350028 TMEM130Q8N3G9 435 aa17.62■□□□□ 0.41
SAMM50-201ENST00000350028 CCDC114Q96M63 670 aa17.62■□□□□ 0.41
SAMM50-201ENST00000350028 CENPHQ9H3R5 247 aa17.62■□□□□ 0.41
SAMM50-201ENST00000350028 SYNCQ9H7C4 482 aa17.62■□□□□ 0.41
SAMM50-201ENST00000350028 HMGXB4Q9UGU5 601 aa17.62■□□□□ 0.41
SAMM50-201ENST00000350028 Q9Y3F1 56 aa17.62■□□□□ 0.41
SAMM50-201ENST00000350028 HAS3O00219 553 aa17.61■□□□□ 0.41
SAMM50-201ENST00000350028 ATF2P15336 505 aa17.61■□□□□ 0.41
SAMM50-201ENST00000350028 IVDP26440 423 aa17.61■□□□□ 0.41
SAMM50-201ENST00000350028 RFC1P35251 1148 aaPredicted RBP17.61■□□□□ 0.41
SAMM50-201ENST00000350028 PSEN2P49810 448 aa17.61■□□□□ 0.41
SAMM50-201ENST00000350028 NDST1P52848 882 aa17.61■□□□□ 0.41
SAMM50-201ENST00000350028 ACAP1Q15027 740 aa17.61■□□□□ 0.41
SAMM50-201ENST00000350028 TAF1CQ15572 869 aaPredicted RBP17.61■□□□□ 0.41
SAMM50-201ENST00000350028 HADHQ16836 314 aaKnown RBP17.61■□□□□ 0.41
SAMM50-201ENST00000350028 RHBDF2Q6PJF5 856 aa17.61■□□□□ 0.41
SAMM50-201ENST00000350028 MFSD7Q6UXD7 560 aa17.61■□□□□ 0.41
SAMM50-201ENST00000350028 TRMT10CQ7L0Y3 403 aaKnown RBP17.61■□□□□ 0.41
SAMM50-201ENST00000350028 CCDC89Q8N998 374 aa17.61■□□□□ 0.41
SAMM50-201ENST00000350028 USP6NLQ92738 828 aa17.61■□□□□ 0.41
SAMM50-201ENST00000350028 MCRS1Q96EZ8 462 aa17.61■□□□□ 0.41
SAMM50-201ENST00000350028 SNX27Q96L92 541 aa17.61■□□□□ 0.41
SAMM50-201ENST00000350028 CPXM1Q96SM3 734 aa17.61■□□□□ 0.41
SAMM50-201ENST00000350028 NT5C1AQ9BXI3 368 aa17.61■□□□□ 0.41
SAMM50-201ENST00000350028 MIS12Q9H081 205 aa17.61■□□□□ 0.41
SAMM50-201ENST00000350028 NEU2Q9Y3R4 380 aa17.61■□□□□ 0.41
SAMM50-201ENST00000350028 PI4K2BG5E9Z4 385 aa17.61■□□□□ 0.41
SAMM50-201ENST00000350028 M0QYV0 167 aa17.61■□□□□ 0.41
SAMM50-201ENST00000350028 IGF2BP3O00425 579 aaKnown RBP eCLIP17.61■□□□□ 0.41
SAMM50-201ENST00000350028 EIF3HO15372 352 aaKnown RBP eCLIP17.61■□□□□ 0.41
SAMM50-201ENST00000350028 ERBB2P04626 1255 aa17.61■□□□□ 0.41
SAMM50-201ENST00000350028 KRT7P08729 469 aa17.61■□□□□ 0.41
SAMM50-201ENST00000350028 TCF4P15884 667 aa17.61■□□□□ 0.41
SAMM50-201ENST00000350028 GPD2P43304 727 aa17.61■□□□□ 0.41
SAMM50-201ENST00000350028 CPT1AP50416 773 aa17.61■□□□□ 0.41
SAMM50-201ENST00000350028 ADAM17P78536 824 aa17.61■□□□□ 0.41
SAMM50-201ENST00000350028 TMEM62Q0P6H9 643 aa17.61■□□□□ 0.41
SAMM50-201ENST00000350028 ORC1Q13415 861 aa17.61■□□□□ 0.41
SAMM50-201ENST00000350028 OLFML2BQ68BL8 750 aa17.61■□□□□ 0.41
SAMM50-201ENST00000350028 LCLAT1Q6UWP7 414 aa17.61■□□□□ 0.41
SAMM50-201ENST00000350028 ZNF365Q70YC5 407 aa17.61■□□□□ 0.41
SAMM50-201ENST00000350028 ANKS1BQ7Z6G8 1248 aa17.61■□□□□ 0.41
SAMM50-201ENST00000350028 RASAL3Q86YV0 1011 aa17.61■□□□□ 0.41
SAMM50-201ENST00000350028 BEST2Q8NFU1 509 aa17.61■□□□□ 0.41
SAMM50-201ENST00000350028 JOSD2Q8TAC2 188 aa17.61■□□□□ 0.41
SAMM50-201ENST00000350028 TMEM109Q9BVC6 243 aa17.61■□□□□ 0.41
SAMM50-201ENST00000350028 AP5M1Q9H0R1 490 aa17.61■□□□□ 0.41
SAMM50-201ENST00000350028 SEMA4AQ9H3S1 761 aa17.61■□□□□ 0.41
SAMM50-201ENST00000350028 CDHR5Q9HBB8 845 aa17.61■□□□□ 0.41
SAMM50-201ENST00000350028 SNTG2Q9NY99 539 aa17.61■□□□□ 0.41
SAMM50-201ENST00000350028 FLRT1Q9NZU1 646 aa17.61■□□□□ 0.41
SAMM50-201ENST00000350028 BCCIPQ9P287 314 aaKnown RBP eCLIP17.61■□□□□ 0.41
SAMM50-201ENST00000350028 GINS2Q9Y248 185 aa17.61■□□□□ 0.41
SAMM50-201ENST00000350028 DRG1Q9Y295 367 aaKnown RBP17.61■□□□□ 0.41
SAMM50-201ENST00000350028 EFR3BQ9Y2G0 817 aa17.61■□□□□ 0.41
SAMM50-201ENST00000350028 ADCY8P40145 1251 aa17.6■□□□□ 0.41
SAMM50-201ENST00000350028 ATP1A2P50993 1020 aa17.6■□□□□ 0.41
SAMM50-201ENST00000350028 SLC29A2Q14542 456 aa17.6■□□□□ 0.41
SAMM50-201ENST00000350028 ZBTB6Q15916 424 aa17.6■□□□□ 0.41
SAMM50-201ENST00000350028 TFDP3Q5H9I0 405 aa17.6■□□□□ 0.41
SAMM50-201ENST00000350028 LRRC52Q8N7C0 313 aa17.6■□□□□ 0.41
SAMM50-201ENST00000350028 CCHCR1Q8TD31 782 aa17.6■□□□□ 0.41
SAMM50-201ENST00000350028 IPO4Q8TEX9 1081 aaKnown RBP17.6■□□□□ 0.41
SAMM50-201ENST00000350028 TSPAN18Q96SJ8 248 aa17.6■□□□□ 0.41
SAMM50-201ENST00000350028 OSMRQ99650 979 aa17.6■□□□□ 0.41
SAMM50-201ENST00000350028 TRAIPQ9BWF2 469 aa17.6■□□□□ 0.41
SAMM50-201ENST00000350028 KLHL11Q9NVR0 708 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms