RNA–Protein interactions for RNA: ENST00000349228.8

TNFSF13-202, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,036 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-202ENST00000349228 DEFB132Q7Z7B7 95 aa16.29■□□□□ 0.2
TNFSF13-202ENST00000349228 TRABD2AQ86V40 505 aa16.29■□□□□ 0.2
TNFSF13-202ENST00000349228 TGS1Q96RS0 853 aaKnown RBP16.29■□□□□ 0.2
TNFSF13-202ENST00000349228 FAM118BQ9BPY3 351 aa16.29■□□□□ 0.2
TNFSF13-202ENST00000349228 NFKBIZQ9BYH8 718 aa16.29■□□□□ 0.2
TNFSF13-202ENST00000349228 BCO2Q9BYV7 579 aa16.29■□□□□ 0.2
TNFSF13-202ENST00000349228 PRKAG3Q9UGI9 489 aa16.29■□□□□ 0.2
TNFSF13-202ENST00000349228 FZD1Q9UP38 647 aa16.29■□□□□ 0.2
TNFSF13-202ENST00000349228 TNFSF13BQ9Y275 285 aa16.29■□□□□ 0.2
TNFSF13-202ENST00000349228 TTLL13PA6NNM8 815 aa16.28■□□□□ 0.2
TNFSF13-202ENST00000349228 NOP56O00567 594 aaKnown RBP16.28■□□□□ 0.2
TNFSF13-202ENST00000349228 PSMA2P25787 234 aa16.28■□□□□ 0.2
TNFSF13-202ENST00000349228 PHBP35232 272 aa16.28■□□□□ 0.2
TNFSF13-202ENST00000349228 PLCB3Q01970 1234 aa16.28■□□□□ 0.2
TNFSF13-202ENST00000349228 MPP2Q14168 576 aa16.28■□□□□ 0.2
TNFSF13-202ENST00000349228 GALNTL6Q49A17 601 aa16.28■□□□□ 0.2
TNFSF13-202ENST00000349228 ZC3H12AQ5D1E8 599 aaKnown RBP16.28■□□□□ 0.2
TNFSF13-202ENST00000349228 ZNF667Q5HYK9 610 aa16.28■□□□□ 0.2
TNFSF13-202ENST00000349228 TREML2Q5T2D2 321 aa16.28■□□□□ 0.2
TNFSF13-202ENST00000349228 CYP4F22Q6NT55 531 aa16.28■□□□□ 0.2
TNFSF13-202ENST00000349228 RGS9BPQ6ZS82 235 aa16.28■□□□□ 0.2
TNFSF13-202ENST00000349228 BBS12Q6ZW61 710 aa16.28■□□□□ 0.2
TNFSF13-202ENST00000349228 TFAP2BQ92481 460 aa16.28■□□□□ 0.2
TNFSF13-202ENST00000349228 TACO1Q9BSH4 297 aaKnown RBP16.28■□□□□ 0.2
TNFSF13-202ENST00000349228 SMARCAD1Q9H4L7 1026 aa16.28■□□□□ 0.2
TNFSF13-202ENST00000349228 RPF1Q9H9Y2 349 aaKnown RBP16.28■□□□□ 0.2
TNFSF13-202ENST00000349228 SSU72Q9NP77 194 aaKnown RBP16.28■□□□□ 0.2
TNFSF13-202ENST00000349228 AGTPBP1Q9UPW5 1226 aa16.28■□□□□ 0.2
TNFSF13-202ENST00000349228 SH3BP1Q9Y3L3 701 aa16.28■□□□□ 0.2
TNFSF13-202ENST00000349228 CSADQ9Y600 493 aa16.28■□□□□ 0.2
TNFSF13-202ENST00000349228 BRCA1P38398 1863 aaKnown RBP16.28■□□□□ 0.2
TNFSF13-202ENST00000349228 A0A1B0GUA9 196 aa16.28■□□□□ 0.2
TNFSF13-202ENST00000349228 C3orf70A6NLC5 250 aaPredicted RBP16.28■□□□□ 0.2
TNFSF13-202ENST00000349228 IRF6O14896 467 aa16.28■□□□□ 0.2
TNFSF13-202ENST00000349228 HBP1O60381 514 aa16.28■□□□□ 0.2
TNFSF13-202ENST00000349228 ATP2C2O75185 946 aa16.28■□□□□ 0.2
TNFSF13-202ENST00000349228 CETPP11597 493 aa16.28■□□□□ 0.2
TNFSF13-202ENST00000349228 ATICP31939 592 aa16.28■□□□□ 0.2
TNFSF13-202ENST00000349228 SLC8A1P32418 973 aa16.28■□□□□ 0.2
TNFSF13-202ENST00000349228 TNFAIP2Q03169 654 aa16.28■□□□□ 0.2
TNFSF13-202ENST00000349228 RIPK1Q13546 671 aa16.28■□□□□ 0.2
TNFSF13-202ENST00000349228 VGLL4Q14135 290 aa16.28■□□□□ 0.2
TNFSF13-202ENST00000349228 MTFR1Q15390 333 aa16.28■□□□□ 0.2
TNFSF13-202ENST00000349228 KYAT1Q16773 422 aa16.28■□□□□ 0.2
TNFSF13-202ENST00000349228 LY6KQ17RY6 165 aa16.28■□□□□ 0.2
TNFSF13-202ENST00000349228 RNF43Q68DV7 783 aa16.28■□□□□ 0.2
TNFSF13-202ENST00000349228 PPIL6Q8IXY8 311 aa16.28■□□□□ 0.2
TNFSF13-202ENST00000349228 CYP3A43Q9HB55 503 aa16.28■□□□□ 0.2
TNFSF13-202ENST00000349228 KLHL11Q9NVR0 708 aa16.28■□□□□ 0.2
TNFSF13-202ENST00000349228 KLHL14Q9P2G3 628 aa16.28■□□□□ 0.2
TNFSF13-202ENST00000349228 TBK1Q9UHD2 729 aa16.28■□□□□ 0.2
TNFSF13-202ENST00000349228 ZBTB42B2RXF5 422 aa16.27■□□□□ 0.2
TNFSF13-202ENST00000349228 SGK1O00141 431 aa16.27■□□□□ 0.2
TNFSF13-202ENST00000349228 ZBTB7AO95365 584 aa16.27■□□□□ 0.2
TNFSF13-202ENST00000349228 TCF4P15884 667 aa16.27■□□□□ 0.2
TNFSF13-202ENST00000349228 SLC25A11Q02978 314 aaKnown RBP16.27■□□□□ 0.2
TNFSF13-202ENST00000349228 CCDC15Q0P6D6 951 aa16.27■□□□□ 0.2
TNFSF13-202ENST00000349228 TMED2Q15363 201 aa16.27■□□□□ 0.2
TNFSF13-202ENST00000349228 WDR72Q3MJ13 1102 aa16.27■□□□□ 0.2
TNFSF13-202ENST00000349228 ZNF394Q53GI3 561 aa16.27■□□□□ 0.2
TNFSF13-202ENST00000349228 DENND1BQ6P3S1 775 aa16.27■□□□□ 0.2
TNFSF13-202ENST00000349228 GPC2Q8N158 579 aa16.27■□□□□ 0.2
TNFSF13-202ENST00000349228 TTC39CQ8N584 583 aa16.27■□□□□ 0.2
TNFSF13-202ENST00000349228 MIS12Q9H081 205 aa16.27■□□□□ 0.2
TNFSF13-202ENST00000349228 RXFP1Q9HBX9 757 aa16.27■□□□□ 0.2
TNFSF13-202ENST00000349228 RGS17Q9UGC6 210 aaPredicted RBP16.27■□□□□ 0.2
TNFSF13-202ENST00000349228 A0A0G2JMZ2 1700 aa16.27■□□□□ 0.19
TNFSF13-202ENST00000349228 P4HA1P13674 534 aa16.26■□□□□ 0.19
TNFSF13-202ENST00000349228 RFC1P35251 1148 aaPredicted RBP16.26■□□□□ 0.19
TNFSF13-202ENST00000349228 ARL4CP56559 192 aa16.26■□□□□ 0.19
TNFSF13-202ENST00000349228 PSMC1P62191 440 aaKnown RBP16.26■□□□□ 0.19
TNFSF13-202ENST00000349228 SPARCL1Q14515 664 aa16.26■□□□□ 0.19
TNFSF13-202ENST00000349228 FAM187BQ17R55 369 aa16.26■□□□□ 0.19
TNFSF13-202ENST00000349228 WDR78Q5VTH9 848 aa16.26■□□□□ 0.19
TNFSF13-202ENST00000349228 CHADLQ6NUI6 762 aa16.26■□□□□ 0.19
TNFSF13-202ENST00000349228 RHPN2Q8IUC4 686 aa16.26■□□□□ 0.19
TNFSF13-202ENST00000349228 GDAP1Q8TB36 358 aa16.26■□□□□ 0.19
TNFSF13-202ENST00000349228 PRCCQ92733 491 aaPredicted RBP16.26■□□□□ 0.19
TNFSF13-202ENST00000349228 SMC6Q96SB8 1091 aa16.26■□□□□ 0.19
TNFSF13-202ENST00000349228 VRTNQ9H8Y1 702 aa16.26■□□□□ 0.19
TNFSF13-202ENST00000349228 PRMT7Q9NVM4 692 aaPredicted RBP16.26■□□□□ 0.19
TNFSF13-202ENST00000349228 FARP1Q9Y4F1 1045 aaPredicted RBP16.26■□□□□ 0.19
TNFSF13-202ENST00000349228 ZSCAN5DPP0CG00 497 aa16.26■□□□□ 0.19
TNFSF13-202ENST00000349228 CD19P15391 556 aa16.26■□□□□ 0.19
TNFSF13-202ENST00000349228 TAC1P20366 129 aa16.26■□□□□ 0.19
TNFSF13-202ENST00000349228 KDELR1P24390 212 aa16.26■□□□□ 0.19
TNFSF13-202ENST00000349228 NF2P35240 595 aa16.26■□□□□ 0.19
TNFSF13-202ENST00000349228 SKIV2L2P42285 1042 aaKnown RBP16.26■□□□□ 0.19
TNFSF13-202ENST00000349228 GABRB2P47870 512 aa16.26■□□□□ 0.19
TNFSF13-202ENST00000349228 ELF3P78545 371 aaPredicted RBP16.26■□□□□ 0.19
TNFSF13-202ENST00000349228 MYO1EQ12965 1108 aa16.26■□□□□ 0.19
TNFSF13-202ENST00000349228 BNIP1Q12981 228 aa16.26■□□□□ 0.19
TNFSF13-202ENST00000349228 PTPN20Q4JDL3 420 aa16.26■□□□□ 0.19
TNFSF13-202ENST00000349228 TMEM63BQ5T3F8 832 aa16.26■□□□□ 0.19
TNFSF13-202ENST00000349228 CCDC91Q7Z6B0 441 aa16.26■□□□□ 0.19
TNFSF13-202ENST00000349228 RPAINQ86UA6 219 aa16.26■□□□□ 0.19
TNFSF13-202ENST00000349228 GLIS1Q8NBF1 620 aa16.26■□□□□ 0.19
TNFSF13-202ENST00000349228 DENND1AQ8TEH3 1009 aa16.26■□□□□ 0.19
TNFSF13-202ENST00000349228 TRABDQ9H4I3 376 aa16.26■□□□□ 0.19
TNFSF13-202ENST00000349228 VPS37BQ9H9H4 285 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms