RNA–Protein interactions for RNA: ENST00000348259.9

MRPL55-204, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-204ENST00000348259 PRKCBP05771 671 aa10.49□□□□□ -0.73
MRPL55-204ENST00000348259 PRKCSHP14314 528 aaPredicted RBP10.49□□□□□ -0.73
MRPL55-204ENST00000348259 PSMC3P17980 439 aa10.49□□□□□ -0.73
MRPL55-204ENST00000348259 CNR2P34972 360 aa10.49□□□□□ -0.73
MRPL55-204ENST00000348259 PBX1P40424 430 aa10.49□□□□□ -0.73
MRPL55-204ENST00000348259 FCHO2Q0JRZ9 810 aa10.49□□□□□ -0.73
MRPL55-204ENST00000348259 TBX2Q13207 712 aaPredicted RBP10.49□□□□□ -0.73
MRPL55-204ENST00000348259 SRSF5Q13243 272 aaKnown RBP10.49□□□□□ -0.73
MRPL55-204ENST00000348259 PRPF4BQ13523 1007 aaKnown RBP10.49□□□□□ -0.73
MRPL55-204ENST00000348259 KCNJ12Q14500 433 aa10.49□□□□□ -0.73
MRPL55-204ENST00000348259 KRT31Q15323 416 aa10.49□□□□□ -0.73
MRPL55-204ENST00000348259 EDRF1Q3B7T1 1238 aa10.49□□□□□ -0.73
MRPL55-204ENST00000348259 DCAF4L1Q3SXM0 396 aa10.49□□□□□ -0.73
MRPL55-204ENST00000348259 GLRA4Q5JXX5 417 aa10.49□□□□□ -0.73
MRPL55-204ENST00000348259 SPECC1LQ69YQ0 1117 aa10.49□□□□□ -0.73
MRPL55-204ENST00000348259 TXNDC11Q6PKC3 985 aa10.49□□□□□ -0.73
MRPL55-204ENST00000348259 MFSD6LQ8IWD5 586 aa10.49□□□□□ -0.73
MRPL55-204ENST00000348259 HS6ST3Q8IZP7 471 aa10.49□□□□□ -0.73
MRPL55-204ENST00000348259 CEP120Q8N960 986 aa10.49□□□□□ -0.73
MRPL55-204ENST00000348259 CCDC150Q8NCX0 1101 aa10.49□□□□□ -0.73
MRPL55-204ENST00000348259 ZNF507Q8TCN5 953 aa10.49□□□□□ -0.73
MRPL55-204ENST00000348259 TMEM174Q8WUU8 243 aa10.49□□□□□ -0.73
MRPL55-204ENST00000348259 DEPDC1BQ8WUY9 529 aa10.49□□□□□ -0.73
MRPL55-204ENST00000348259 SCFD1Q8WVM8 642 aa10.49□□□□□ -0.73
MRPL55-204ENST00000348259 FAM3CQ92520 227 aa10.49□□□□□ -0.73
MRPL55-204ENST00000348259 CEP63Q96MT8 703 aa10.49□□□□□ -0.73
MRPL55-204ENST00000348259 TSG101Q99816 390 aa10.49□□□□□ -0.73
MRPL55-204ENST00000348259 MKNK1Q9BUB5 465 aa10.49□□□□□ -0.73
MRPL55-204ENST00000348259 C2orf40Q9H1Z8 148 aa10.49□□□□□ -0.73
MRPL55-204ENST00000348259 KCTD10Q9H3F6 313 aa10.49□□□□□ -0.73
MRPL55-204ENST00000348259 BRD9Q9H8M2 597 aa10.49□□□□□ -0.73
MRPL55-204ENST00000348259 PARVGQ9HBI0 331 aa10.49□□□□□ -0.73
MRPL55-204ENST00000348259 PTPRHQ9HD43 1115 aa10.49□□□□□ -0.73
MRPL55-204ENST00000348259 CEP72Q9P209 647 aa10.49□□□□□ -0.73
MRPL55-204ENST00000348259 TRAF3IP3Q9Y228 551 aa10.49□□□□□ -0.73
MRPL55-204ENST00000348259 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.49□□□□□ -0.73
MRPL55-204ENST00000348259 UBE4BO95155 1302 aa10.49□□□□□ -0.73
MRPL55-204ENST00000348259 ITIH6Q6UXX5 1313 aa10.49□□□□□ -0.73
MRPL55-204ENST00000348259 FASNP49327 2511 aaKnown RBP10.49□□□□□ -0.73
MRPL55-204ENST00000348259 TRIM49BA6NDI0 452 aa10.48□□□□□ -0.73
MRPL55-204ENST00000348259 CHURC1-FNTBB4DL54 471 aa10.48□□□□□ -0.73
MRPL55-204ENST00000348259 PDXKO00764 312 aa10.48□□□□□ -0.73
MRPL55-204ENST00000348259 ZNF197O14709 1029 aa10.48□□□□□ -0.73
MRPL55-204ENST00000348259 SYN3O14994 580 aa10.48□□□□□ -0.73
MRPL55-204ENST00000348259 GNA14O95837 355 aa10.48□□□□□ -0.73
MRPL55-204ENST00000348259 MSNP26038 577 aaKnown RBP10.48□□□□□ -0.73
MRPL55-204ENST00000348259 GDI1P31150 447 aa10.48□□□□□ -0.73
MRPL55-204ENST00000348259 VIPR2P41587 438 aa10.48□□□□□ -0.73
MRPL55-204ENST00000348259 NAMPTP43490 491 aa10.48□□□□□ -0.73
MRPL55-204ENST00000348259 CXCL12P48061 93 aa10.48□□□□□ -0.73
MRPL55-204ENST00000348259 FNTBP49356 437 aa10.48□□□□□ -0.73
MRPL55-204ENST00000348259 COPB1P53618 953 aaKnown RBP10.48□□□□□ -0.73
MRPL55-204ENST00000348259 MARSP56192 900 aaKnown RBP10.48□□□□□ -0.73
MRPL55-204ENST00000348259 FKBP3Q00688 224 aaKnown RBP10.48□□□□□ -0.73
MRPL55-204ENST00000348259 ALCAMQ13740 583 aa10.48□□□□□ -0.73
MRPL55-204ENST00000348259 CCINQ13939 588 aa10.48□□□□□ -0.73
MRPL55-204ENST00000348259 SIM2Q14190 667 aaPredicted RBP10.48□□□□□ -0.73
MRPL55-204ENST00000348259 NFIL3Q16649 462 aa10.48□□□□□ -0.73
MRPL55-204ENST00000348259 MAPK6Q16659 721 aa10.48□□□□□ -0.73
MRPL55-204ENST00000348259 TPGS2Q68CL5 300 aa10.48□□□□□ -0.73
MRPL55-204ENST00000348259 PADI6Q6TGC4 694 aa10.48□□□□□ -0.73
MRPL55-204ENST00000348259 Q6ZS52 159 aa10.48□□□□□ -0.73
MRPL55-204ENST00000348259 STXBP4Q6ZWJ1 553 aa10.48□□□□□ -0.73
MRPL55-204ENST00000348259 FILIP1Q7Z7B0 1213 aa10.48□□□□□ -0.73
MRPL55-204ENST00000348259 LONP2Q86WA8 852 aa10.48□□□□□ -0.73
MRPL55-204ENST00000348259 TMC8Q8IU68 726 aa10.48□□□□□ -0.73
MRPL55-204ENST00000348259 ZBTB8OSQ8IWT0 167 aa10.48□□□□□ -0.73
MRPL55-204ENST00000348259 LRRC8AQ8IWT6 810 aa10.48□□□□□ -0.73
MRPL55-204ENST00000348259 SHKBP1Q8TBC3 707 aa10.48□□□□□ -0.73
MRPL55-204ENST00000348259 HPS3Q969F9 1004 aa10.48□□□□□ -0.73
MRPL55-204ENST00000348259 MSANTD3Q96H12 275 aa10.48□□□□□ -0.73
MRPL55-204ENST00000348259 LRRC3BQ96PB8 259 aa10.48□□□□□ -0.73
MRPL55-204ENST00000348259 CORO1BQ9BR76 489 aa10.48□□□□□ -0.73
MRPL55-204ENST00000348259 STRA6Q9BX79 667 aa10.48□□□□□ -0.73
MRPL55-204ENST00000348259 ST6GALNAC4Q9H4F1 302 aa10.48□□□□□ -0.73
MRPL55-204ENST00000348259 MAGEC2Q9UBF1 373 aaPredicted RBP10.48□□□□□ -0.73
MRPL55-204ENST00000348259 KCNG1Q9UIX4 513 aa10.48□□□□□ -0.73
MRPL55-204ENST00000348259 FBXL5Q9UKA1 691 aa10.48□□□□□ -0.73
MRPL55-204ENST00000348259 SMG1Q96Q15 3661 aaKnown RBP10.48□□□□□ -0.73
MRPL55-204ENST00000348259 FREM2Q5SZK8 3169 aa10.47□□□□□ -0.73
MRPL55-204ENST00000348259 A0A1W2PQC6 194 aa10.47□□□□□ -0.73
MRPL55-204ENST00000348259 MYBPHLA2RUH7 354 aa10.47□□□□□ -0.73
MRPL55-204ENST00000348259 CHADO15335 359 aa10.47□□□□□ -0.73
MRPL55-204ENST00000348259 FOXD2O60548 495 aaPredicted RBP10.47□□□□□ -0.73
MRPL55-204ENST00000348259 FAM13AO94988 1023 aa10.47□□□□□ -0.73
MRPL55-204ENST00000348259 LRG1P02750 347 aa10.47□□□□□ -0.73
MRPL55-204ENST00000348259 KCNE1P15382 129 aa10.47□□□□□ -0.73
MRPL55-204ENST00000348259 SCP2P22307 547 aa10.47□□□□□ -0.73
MRPL55-204ENST00000348259 PROZP22891 400 aa10.47□□□□□ -0.73
MRPL55-204ENST00000348259 GRM5P41594 1212 aa10.47□□□□□ -0.73
MRPL55-204ENST00000348259 MAPK7Q13164 816 aa10.47□□□□□ -0.73
MRPL55-204ENST00000348259 PPP2R5DQ14738 602 aa10.47□□□□□ -0.73
MRPL55-204ENST00000348259 KNOP1Q1ED39 458 aaKnown RBP10.47□□□□□ -0.73
MRPL55-204ENST00000348259 PLA2G2CQ5R387 149 aa10.47□□□□□ -0.73
MRPL55-204ENST00000348259 N4BP2L1Q5TBK1 243 aaPredicted RBP10.47□□□□□ -0.73
MRPL55-204ENST00000348259 MAEAQ7L5Y9 396 aa10.47□□□□□ -0.73
MRPL55-204ENST00000348259 TAS1R3Q7RTX0 852 aa10.47□□□□□ -0.73
MRPL55-204ENST00000348259 ZNF720Q7Z2F6 126 aa10.47□□□□□ -0.73
MRPL55-204ENST00000348259 TMC6Q7Z403 805 aa10.47□□□□□ -0.73
MRPL55-204ENST00000348259 WDR5BQ86VZ2 330 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms