RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 ERICH1Q86X53 443 aa11.64□□□□□ -0.55
ECM1-201ENST00000346569 COLGALT2Q8IYK4 626 aa11.64□□□□□ -0.55
ECM1-201ENST00000346569 ADGRF2Q8IZF7 708 aa11.64□□□□□ -0.55
ECM1-201ENST00000346569 ZNF564Q8TBZ8 553 aaPredicted RBP11.64□□□□□ -0.55
ECM1-201ENST00000346569 SPATA18Q8TC71 538 aa11.64□□□□□ -0.55
ECM1-201ENST00000346569 RABGGTAQ92696 567 aa11.64□□□□□ -0.55
ECM1-201ENST00000346569 HES6Q96HZ4 224 aa11.64□□□□□ -0.55
ECM1-201ENST00000346569 OSBPL9Q96SU4 736 aa11.64□□□□□ -0.55
ECM1-201ENST00000346569 LPIN3Q9BQK8 851 aa11.64□□□□□ -0.55
ECM1-201ENST00000346569 C11orf70Q9BRQ4 267 aa11.64□□□□□ -0.55
ECM1-201ENST00000346569 PPP1R12CQ9BZL4 782 aa11.64□□□□□ -0.55
ECM1-201ENST00000346569 SNX25Q9H3E2 840 aa11.64□□□□□ -0.55
ECM1-201ENST00000346569 GOLPH3Q9H4A6 298 aa11.64□□□□□ -0.55
ECM1-201ENST00000346569 DPEP3Q9H4B8 488 aa11.64□□□□□ -0.55
ECM1-201ENST00000346569 TMEM39AQ9NV64 488 aa11.64□□□□□ -0.55
ECM1-201ENST00000346569 TSPAN16Q9UKR8 245 aa11.64□□□□□ -0.55
ECM1-201ENST00000346569 AMFRQ9UKV5 643 aa11.64□□□□□ -0.55
ECM1-201ENST00000346569 INPP5FQ9Y2H2 1132 aa11.64□□□□□ -0.55
ECM1-201ENST00000346569 PCDHB7Q9Y5E2 793 aa11.64□□□□□ -0.55
ECM1-201ENST00000346569 TTC3P53804 2025 aa11.63□□□□□ -0.55
ECM1-201ENST00000346569 TMEM189-UBE2V1I3L0A0 370 aa11.63□□□□□ -0.55
ECM1-201ENST00000346569 B3GAT3O94766 335 aa11.63□□□□□ -0.55
ECM1-201ENST00000346569 KIF4AO95239 1232 aa11.63□□□□□ -0.55
ECM1-201ENST00000346569 TCP1P17987 556 aaKnown RBP11.63□□□□□ -0.55
ECM1-201ENST00000346569 PTPN1P18031 435 aaKnown RBP11.63□□□□□ -0.55
ECM1-201ENST00000346569 IBSPP21815 317 aaPredicted RBP11.63□□□□□ -0.55
ECM1-201ENST00000346569 ITGB8P26012 769 aa11.63□□□□□ -0.55
ECM1-201ENST00000346569 LHX1P48742 406 aa11.63□□□□□ -0.55
ECM1-201ENST00000346569 GSCP56915 257 aaPredicted RBP11.63□□□□□ -0.55
ECM1-201ENST00000346569 ZNF268Q14587 947 aaPredicted RBP11.63□□□□□ -0.55
ECM1-201ENST00000346569 RPS6KA1Q15418 735 aa11.63□□□□□ -0.55
ECM1-201ENST00000346569 WHAMMP3Q1A5X7 153 aa11.63□□□□□ -0.55
ECM1-201ENST00000346569 PTPN20Q4JDL3 420 aa11.63□□□□□ -0.55
ECM1-201ENST00000346569 PPP1R15BQ5SWA1 713 aa11.63□□□□□ -0.55
ECM1-201ENST00000346569 NECAB2Q7Z6G3 386 aa11.63□□□□□ -0.55
ECM1-201ENST00000346569 UBE2Q1Q7Z7E8 422 aa11.63□□□□□ -0.55
ECM1-201ENST00000346569 DAAM2Q86T65 1068 aa11.63□□□□□ -0.55
ECM1-201ENST00000346569 TTC30AQ86WT1 665 aa11.63□□□□□ -0.55
ECM1-201ENST00000346569 CREG2Q8IUH2 290 aa11.63□□□□□ -0.55
ECM1-201ENST00000346569 ANKRD52Q8NB46 1076 aa11.63□□□□□ -0.55
ECM1-201ENST00000346569 UBA3Q8TBC4 463 aa11.63□□□□□ -0.55
ECM1-201ENST00000346569 FEZF2Q8TBJ5 459 aa11.63□□□□□ -0.55
ECM1-201ENST00000346569 SLC35F5Q8WV83 523 aa11.63□□□□□ -0.55
ECM1-201ENST00000346569 TNIP3Q96KP6 325 aa11.63□□□□□ -0.55
ECM1-201ENST00000346569 SUSD3Q96L08 255 aa11.63□□□□□ -0.55
ECM1-201ENST00000346569 CPXM1Q96SM3 734 aa11.63□□□□□ -0.55
ECM1-201ENST00000346569 TMEM106CQ9BVX2 250 aa11.63□□□□□ -0.55
ECM1-201ENST00000346569 CARD6Q9BX69 1037 aa11.63□□□□□ -0.55
ECM1-201ENST00000346569 TBC1D13Q9NVG8 400 aa11.63□□□□□ -0.55
ECM1-201ENST00000346569 HYOU1Q9Y4L1 999 aa11.63□□□□□ -0.55
ECM1-201ENST00000346569 CEP83Q9Y592 693 aa11.63□□□□□ -0.55
ECM1-201ENST00000346569 TRIM43BA6NCK2 446 aa11.62□□□□□ -0.55
ECM1-201ENST00000346569 TMEM191CA6NGB0 347 aa11.62□□□□□ -0.55
ECM1-201ENST00000346569 CES2O00748 559 aa11.62□□□□□ -0.55
ECM1-201ENST00000346569 KIAA0355O15063 1070 aa11.62□□□□□ -0.55
ECM1-201ENST00000346569 ZNF185O15231 689 aa11.62□□□□□ -0.55
ECM1-201ENST00000346569 GABBR2O75899 941 aa11.62□□□□□ -0.55
ECM1-201ENST00000346569 TIMP1P01033 207 aa11.62□□□□□ -0.55
ECM1-201ENST00000346569 SETSIPP0DME0 302 aa11.62□□□□□ -0.55
ECM1-201ENST00000346569 RFC2P35250 354 aa11.62□□□□□ -0.55
ECM1-201ENST00000346569 BRCC3P46736 316 aa11.62□□□□□ -0.55
ECM1-201ENST00000346569 RPL34P49207 117 aaKnown RBP11.62□□□□□ -0.55
ECM1-201ENST00000346569 KIAA0319Q5VV43 1072 aa11.62□□□□□ -0.55
ECM1-201ENST00000346569 CNKSR3Q6P9H4 555 aa11.62□□□□□ -0.55
ECM1-201ENST00000346569 DSTYKQ6XUX3 929 aa11.62□□□□□ -0.55
ECM1-201ENST00000346569 PAQR9Q6ZVX9 377 aa11.62□□□□□ -0.55
ECM1-201ENST00000346569 PEX26Q7Z412 305 aa11.62□□□□□ -0.55
ECM1-201ENST00000346569 PHLDB2Q86SQ0 1253 aa11.62□□□□□ -0.55
ECM1-201ENST00000346569 TMEM110Q86TL2 294 aa11.62□□□□□ -0.55
ECM1-201ENST00000346569 B3GALNT2Q8NCR0 500 aa11.62□□□□□ -0.55
ECM1-201ENST00000346569 LRRN4CLQ8ND94 238 aa11.62□□□□□ -0.55
ECM1-201ENST00000346569 URGCPQ8TCY9 931 aa11.62□□□□□ -0.55
ECM1-201ENST00000346569 COG1Q8WTW3 980 aa11.62□□□□□ -0.55
ECM1-201ENST00000346569 STK32AQ8WU08 396 aa11.62□□□□□ -0.55
ECM1-201ENST00000346569 RSPH1Q8WYR4 309 aa11.62□□□□□ -0.55
ECM1-201ENST00000346569 CD101Q93033 1021 aa11.62□□□□□ -0.55
ECM1-201ENST00000346569 TRIM43Q96BQ3 446 aaPredicted RBP11.62□□□□□ -0.55
ECM1-201ENST00000346569 C18orf8Q96DM3 657 aa11.62□□□□□ -0.55
ECM1-201ENST00000346569 MCRS1Q96EZ8 462 aa11.62□□□□□ -0.55
ECM1-201ENST00000346569 BTBD6Q96KE9 485 aa11.62□□□□□ -0.55
ECM1-201ENST00000346569 HNRNPABQ99729 332 aaKnown RBP11.62□□□□□ -0.55
ECM1-201ENST00000346569 SLC4A5Q9BY07 1137 aa11.62□□□□□ -0.55
ECM1-201ENST00000346569 TRIM7Q9C029 511 aa11.62□□□□□ -0.55
ECM1-201ENST00000346569 NRDE2Q9H7Z3 1164 aa11.62□□□□□ -0.55
ECM1-201ENST00000346569 MRPL47Q9HD33 250 aaKnown RBP11.62□□□□□ -0.55
ECM1-201ENST00000346569 PARVAQ9NVD7 372 aa11.62□□□□□ -0.55
ECM1-201ENST00000346569 TJP2Q9UDY2 1190 aa11.62□□□□□ -0.55
ECM1-201ENST00000346569 PACSIN2Q9UNF0 486 aaPredicted RBP11.62□□□□□ -0.55
ECM1-201ENST00000346569 TIMM13Q9Y5L4 95 aaPredicted RBP11.62□□□□□ -0.55
ECM1-201ENST00000346569 SIGLEC16A6NMB1 481 aa11.61□□□□□ -0.55
ECM1-201ENST00000346569 PDE2AO00408 941 aaPredicted RBP11.61□□□□□ -0.55
ECM1-201ENST00000346569 DDX3YO15523 660 aaKnown RBP11.61□□□□□ -0.55
ECM1-201ENST00000346569 ATP2C2O75185 946 aa11.61□□□□□ -0.55
ECM1-201ENST00000346569 ITGB1P05556 798 aa11.61□□□□□ -0.55
ECM1-201ENST00000346569 TYMPP19971 482 aa11.61□□□□□ -0.55
ECM1-201ENST00000346569 PEX5P50542 639 aa11.61□□□□□ -0.55
ECM1-201ENST00000346569 PDCLQ13371 301 aa11.61□□□□□ -0.55
ECM1-201ENST00000346569 MESDQ14696 234 aa11.61□□□□□ -0.55
ECM1-201ENST00000346569 PMF1Q6P1K2 205 aa11.61□□□□□ -0.55
ECM1-201ENST00000346569 ZNF572Q7Z3I7 529 aaPredicted RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms