RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 PRRX2Q99811 253 aa16.86■□□□□ 0.29
TSPAN4-201ENST00000346501 CRISPLD1Q9H336 500 aa16.86■□□□□ 0.29
TSPAN4-201ENST00000346501 ATXN3LQ9H3M9 355 aa16.86■□□□□ 0.29
TSPAN4-201ENST00000346501 VRTNQ9H8Y1 702 aa16.86■□□□□ 0.29
TSPAN4-201ENST00000346501 EHD2Q9NZN4 543 aa16.86■□□□□ 0.29
TSPAN4-201ENST00000346501 UXTQ9UBK9 157 aaPredicted RBP16.86■□□□□ 0.29
TSPAN4-201ENST00000346501 WNT16Q9UBV4 365 aa16.86■□□□□ 0.29
TSPAN4-201ENST00000346501 TSC2P49815 1807 aa16.85■□□□□ 0.29
TSPAN4-201ENST00000346501 BICDL2A1A5D9 508 aa16.85■□□□□ 0.29
TSPAN4-201ENST00000346501 DPYSL4O14531 572 aa16.85■□□□□ 0.29
TSPAN4-201ENST00000346501 GADD45BO75293 160 aaPredicted RBP16.85■□□□□ 0.29
TSPAN4-201ENST00000346501 ECI2O75521 394 aa16.85■□□□□ 0.29
TSPAN4-201ENST00000346501 SOAT2O75908 522 aa16.85■□□□□ 0.29
TSPAN4-201ENST00000346501 VNN2O95498 520 aa16.85■□□□□ 0.29
TSPAN4-201ENST00000346501 CFHP08603 1231 aa16.85■□□□□ 0.29
TSPAN4-201ENST00000346501 ANXA13P27216 316 aa16.85■□□□□ 0.29
TSPAN4-201ENST00000346501 GABRR2P28476 465 aa16.85■□□□□ 0.29
TSPAN4-201ENST00000346501 GTF2H1P32780 548 aa16.85■□□□□ 0.29
TSPAN4-201ENST00000346501 CYP27A1Q02318 531 aa16.85■□□□□ 0.29
TSPAN4-201ENST00000346501 CFAP221Q4G0U5 840 aa16.85■□□□□ 0.29
TSPAN4-201ENST00000346501 TCERG1LQ5VWI1 586 aa16.85■□□□□ 0.29
TSPAN4-201ENST00000346501 VSTM1Q6UX27 236 aa16.85■□□□□ 0.29
TSPAN4-201ENST00000346501 SV2AQ7L0J3 742 aa16.85■□□□□ 0.29
TSPAN4-201ENST00000346501 SCN4BQ8IWT1 228 aa16.85■□□□□ 0.29
TSPAN4-201ENST00000346501 TTC9BQ8N6N2 239 aa16.85■□□□□ 0.29
TSPAN4-201ENST00000346501 GIPC2Q8TF65 315 aa16.85■□□□□ 0.29
TSPAN4-201ENST00000346501 ERCC4Q92889 916 aaPredicted RBP16.85■□□□□ 0.29
TSPAN4-201ENST00000346501 FGF14Q92915 247 aa16.85■□□□□ 0.29
TSPAN4-201ENST00000346501 TCEAL4Q96EI5 215 aa16.85■□□□□ 0.29
TSPAN4-201ENST00000346501 ASIC4Q96FT7 647 aa16.85■□□□□ 0.29
TSPAN4-201ENST00000346501 SHDQ96IW2 340 aa16.85■□□□□ 0.29
TSPAN4-201ENST00000346501 TNIP3Q96KP6 325 aa16.85■□□□□ 0.29
TSPAN4-201ENST00000346501 KCNH6Q9H252 994 aa16.85■□□□□ 0.29
TSPAN4-201ENST00000346501 MMRN2Q9H8L6 949 aa16.85■□□□□ 0.29
TSPAN4-201ENST00000346501 ATP8B3O60423 1300 aa16.85■□□□□ 0.29
TSPAN4-201ENST00000346501 DOCK8Q8NF50 2099 aa16.84■□□□□ 0.29
TSPAN4-201ENST00000346501 A0A1W2PRU2 124 aa16.84■□□□□ 0.29
TSPAN4-201ENST00000346501 SLC16A3O15427 465 aaKnown RBP16.84■□□□□ 0.29
TSPAN4-201ENST00000346501 CCNE1P24864 410 aa16.84■□□□□ 0.29
TSPAN4-201ENST00000346501 DLG4P78352 724 aa16.84■□□□□ 0.29
TSPAN4-201ENST00000346501 TEAD2Q15562 447 aa16.84■□□□□ 0.29
TSPAN4-201ENST00000346501 ZCWPW2Q504Y3 356 aa16.84■□□□□ 0.29
TSPAN4-201ENST00000346501 LIMS2Q7Z4I7 341 aa16.84■□□□□ 0.29
TSPAN4-201ENST00000346501 OSTM1Q86WC4 334 aa16.84■□□□□ 0.29
TSPAN4-201ENST00000346501 YAF2Q8IY57 180 aa16.84■□□□□ 0.29
TSPAN4-201ENST00000346501 ADSSL1Q8N142 457 aa16.84■□□□□ 0.29
TSPAN4-201ENST00000346501 PLEKHO2Q8TD55 490 aa16.84■□□□□ 0.29
TSPAN4-201ENST00000346501 KBTBD7Q8WVZ9 684 aa16.84■□□□□ 0.29
TSPAN4-201ENST00000346501 SMARCD2Q92925 531 aa16.84■□□□□ 0.29
TSPAN4-201ENST00000346501 ELSPBP1Q96BH3 223 aa16.84■□□□□ 0.29
TSPAN4-201ENST00000346501 KXD1Q9BQD3 176 aa16.84■□□□□ 0.29
TSPAN4-201ENST00000346501 LPIN3Q9BQK8 851 aa16.84■□□□□ 0.29
TSPAN4-201ENST00000346501 DNAJC25Q9H1X3 360 aa16.84■□□□□ 0.29
TSPAN4-201ENST00000346501 SLC2A4RGQ9NR83 387 aa16.84■□□□□ 0.29
TSPAN4-201ENST00000346501 MAGED2Q9UNF1 606 aaPredicted RBP16.84■□□□□ 0.29
TSPAN4-201ENST00000346501 TECTAO75443 2155 aa16.84■□□□□ 0.29
TSPAN4-201ENST00000346501 MYBPHLA2RUH7 354 aa16.83■□□□□ 0.28
TSPAN4-201ENST00000346501 HLA-DRAP01903 254 aa16.83■□□□□ 0.28
TSPAN4-201ENST00000346501 CYP2F1P24903 491 aa16.83■□□□□ 0.28
TSPAN4-201ENST00000346501 LMO2P25791 158 aa16.83■□□□□ 0.28
TSPAN4-201ENST00000346501 GRIK1P39086 918 aa16.83■□□□□ 0.28
TSPAN4-201ENST00000346501 MAGEA11P43364 429 aa16.83■□□□□ 0.28
TSPAN4-201ENST00000346501 GCLMP48507 274 aa16.83■□□□□ 0.28
TSPAN4-201ENST00000346501 CDR1P51861 262 aa16.83■□□□□ 0.28
TSPAN4-201ENST00000346501 PSMC1P62191 440 aaKnown RBP16.83■□□□□ 0.28
TSPAN4-201ENST00000346501 KRT39Q6A163 491 aa16.83■□□□□ 0.28
TSPAN4-201ENST00000346501 SCARA3Q6AZY7 606 aa16.83■□□□□ 0.28
TSPAN4-201ENST00000346501 ISM2Q6H9L7 571 aa16.83■□□□□ 0.28
TSPAN4-201ENST00000346501 FAM171BQ6P995 826 aa16.83■□□□□ 0.28
TSPAN4-201ENST00000346501 SCARA5Q6ZMJ2 495 aa16.83■□□□□ 0.28
TSPAN4-201ENST00000346501 SIX5Q8N196 739 aa16.83■□□□□ 0.28
TSPAN4-201ENST00000346501 FLCNQ8NFG4 579 aa16.83■□□□□ 0.28
TSPAN4-201ENST00000346501 SHKBP1Q8TBC3 707 aa16.83■□□□□ 0.28
TSPAN4-201ENST00000346501 ZSCAN18Q8TBC5 510 aaPredicted RBP16.83■□□□□ 0.28
TSPAN4-201ENST00000346501 MYCBPAPQ8TBZ2 947 aa16.83■□□□□ 0.28
TSPAN4-201ENST00000346501 MRPS31Q92665 395 aaKnown RBP16.83■□□□□ 0.28
TSPAN4-201ENST00000346501 DOCK6Q96HP0 2047 aa16.83■□□□□ 0.28
TSPAN4-201ENST00000346501 CEP295NLQ96MC4 621 aa16.83■□□□□ 0.28
TSPAN4-201ENST00000346501 MRPL45Q9BRJ2 306 aaKnown RBP16.83■□□□□ 0.28
TSPAN4-201ENST00000346501 GZF1Q9H116 711 aaPredicted RBP16.83■□□□□ 0.28
TSPAN4-201ENST00000346501 XYLT2Q9H1B5 865 aa16.83■□□□□ 0.28
TSPAN4-201ENST00000346501 SMOC2Q9H3U7 446 aa16.83■□□□□ 0.28
TSPAN4-201ENST00000346501 METTL14Q9HCE5 456 aaKnown RBP16.83■□□□□ 0.28
TSPAN4-201ENST00000346501 TMEM8AQ9HCN3 771 aa16.83■□□□□ 0.28
TSPAN4-201ENST00000346501 TMLHEQ9NVH6 421 aa16.83■□□□□ 0.28
TSPAN4-201ENST00000346501 MAN1B1Q9UKM7 699 aa16.83■□□□□ 0.28
TSPAN4-201ENST00000346501 ARIH1Q9Y4X5 557 aaPredicted RBP16.83■□□□□ 0.28
TSPAN4-201ENST00000346501 C5orf42Q9H799 3197 aa16.82■□□□□ 0.28
TSPAN4-201ENST00000346501 GOLGA6L22H0YM25 854 aa16.82■□□□□ 0.28
TSPAN4-201ENST00000346501 TRIM66O15016 1216 aa16.82■□□□□ 0.28
TSPAN4-201ENST00000346501 NARSO43776 548 aaKnown RBP16.82■□□□□ 0.28
TSPAN4-201ENST00000346501 FGFR1OPO95684 399 aaKnown RBP16.82■□□□□ 0.28
TSPAN4-201ENST00000346501 TRIM49P0CI25 452 aa16.82■□□□□ 0.28
TSPAN4-201ENST00000346501 TRIM49CP0CI26 452 aa16.82■□□□□ 0.28
TSPAN4-201ENST00000346501 GJA1P17302 382 aa16.82■□□□□ 0.28
TSPAN4-201ENST00000346501 PTPN1P18031 435 aaKnown RBP16.82■□□□□ 0.28
TSPAN4-201ENST00000346501 ATF6P18850 670 aa16.82■□□□□ 0.28
TSPAN4-201ENST00000346501 CCR2P41597 374 aa16.82■□□□□ 0.28
TSPAN4-201ENST00000346501 MXI1P50539 228 aa16.82■□□□□ 0.28
TSPAN4-201ENST00000346501 DDR2Q16832 855 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms