RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 FAM129AQ9BZQ8 928 aa11.39□□□□□ -0.59
CLCN6-202ENST00000346436 SELENONQ9NZV5 590 aa11.39□□□□□ -0.59
CLCN6-202ENST00000346436 STK39Q9UEW8 545 aa11.39□□□□□ -0.59
CLCN6-202ENST00000346436 PCDHB9Q9Y5E1 797 aa11.39□□□□□ -0.59
CLCN6-202ENST00000346436 MT-ND3P03897 115 aa11.39□□□□□ -0.59
CLCN6-202ENST00000346436 FAM200BP0CF97 657 aa11.39□□□□□ -0.59
CLCN6-202ENST00000346436 ADORA2AP29274 412 aa11.39□□□□□ -0.59
CLCN6-202ENST00000346436 DSG3P32926 999 aa11.39□□□□□ -0.59
CLCN6-202ENST00000346436 CASP2P42575 452 aa11.39□□□□□ -0.59
CLCN6-202ENST00000346436 SULT1E1P49888 294 aa11.39□□□□□ -0.59
CLCN6-202ENST00000346436 SLC12A1Q13621 1099 aa11.39□□□□□ -0.59
CLCN6-202ENST00000346436 IMPG1Q17R60 797 aa11.39□□□□□ -0.59
CLCN6-202ENST00000346436 HEATR6Q6AI08 1181 aaKnown RBP11.39□□□□□ -0.59
CLCN6-202ENST00000346436 ANKMY2Q8IV38 441 aa11.39□□□□□ -0.59
CLCN6-202ENST00000346436 MFN1Q8IWA4 741 aa11.39□□□□□ -0.59
CLCN6-202ENST00000346436 KIF2BQ8N4N8 673 aa11.39□□□□□ -0.59
CLCN6-202ENST00000346436 RUBCNQ92622 972 aa11.39□□□□□ -0.59
CLCN6-202ENST00000346436 FAM167BQ9BTA0 163 aa11.39□□□□□ -0.59
CLCN6-202ENST00000346436 KIAA1683Q9H0B3 1180 aa11.39□□□□□ -0.59
CLCN6-202ENST00000346436 WNT8AQ9H1J5 351 aa11.39□□□□□ -0.59
CLCN6-202ENST00000346436 C17orf75Q9HAS0 396 aa11.39□□□□□ -0.59
CLCN6-202ENST00000346436 FBXO28Q9NVF7 368 aa11.39□□□□□ -0.59
CLCN6-202ENST00000346436 PHF2O75151 1096 aa11.39□□□□□ -0.59
CLCN6-202ENST00000346436 RTN2O75298 545 aa11.39□□□□□ -0.59
CLCN6-202ENST00000346436 THP07101 528 aa11.39□□□□□ -0.59
CLCN6-202ENST00000346436 ACOT2P49753 483 aa11.39□□□□□ -0.59
CLCN6-202ENST00000346436 NPEPPSP55786 919 aa11.39□□□□□ -0.59
CLCN6-202ENST00000346436 NSUN2Q08J23 767 aaKnown RBP eCLIP11.39□□□□□ -0.59
CLCN6-202ENST00000346436 KCNA1Q09470 495 aa11.39□□□□□ -0.59
CLCN6-202ENST00000346436 DHX34Q14147 1143 aaKnown RBP11.39□□□□□ -0.59
CLCN6-202ENST00000346436 IZUMO3Q5VZ72 239 aa11.39□□□□□ -0.59
CLCN6-202ENST00000346436 ZBED8Q8IZ13 594 aa11.39□□□□□ -0.59
CLCN6-202ENST00000346436 FBXL13Q8NEE6 735 aa11.39□□□□□ -0.59
CLCN6-202ENST00000346436 MYCBPAPQ8TBZ2 947 aa11.39□□□□□ -0.59
CLCN6-202ENST00000346436 MAML1Q92585 1016 aa11.39□□□□□ -0.59
CLCN6-202ENST00000346436 TMEM117Q9H0C3 514 aa11.39□□□□□ -0.59
CLCN6-202ENST00000346436 ARHGAP10A1A4S6 786 aa11.38□□□□□ -0.59
CLCN6-202ENST00000346436 GOLGA8RI6L899 631 aa11.38□□□□□ -0.59
CLCN6-202ENST00000346436 CASQ2O14958 399 aaPredicted RBP11.38□□□□□ -0.59
CLCN6-202ENST00000346436 VCAM1P19320 739 aa11.38□□□□□ -0.59
CLCN6-202ENST00000346436 GARTP22102 1010 aa11.38□□□□□ -0.59
CLCN6-202ENST00000346436 PAX3P23760 479 aa11.38□□□□□ -0.59
CLCN6-202ENST00000346436 DBN1Q16643 649 aa11.38□□□□□ -0.59
CLCN6-202ENST00000346436 FBXO16Q8IX29 292 aaPredicted RBP11.38□□□□□ -0.59
CLCN6-202ENST00000346436 EPS8L3Q8TE67 593 aaKnown RBP11.38□□□□□ -0.59
CLCN6-202ENST00000346436 AENQ8WTP8 325 aaKnown RBP11.38□□□□□ -0.59
CLCN6-202ENST00000346436 SLC20A1Q8WUM9 679 aa11.38□□□□□ -0.59
CLCN6-202ENST00000346436 SYN2Q92777 582 aaPredicted RBP11.38□□□□□ -0.59
CLCN6-202ENST00000346436 DEFB118Q96PH6 123 aa11.38□□□□□ -0.59
CLCN6-202ENST00000346436 GPRC5CQ9NQ84 441 aa11.38□□□□□ -0.59
CLCN6-202ENST00000346436 DDX56Q9NY93 547 aaKnown RBP11.38□□□□□ -0.59
CLCN6-202ENST00000346436 CACNA1FO60840 1977 aa11.38□□□□□ -0.59
CLCN6-202ENST00000346436 PRPF4O43172 522 aaKnown RBP eCLIP11.38□□□□□ -0.59
CLCN6-202ENST00000346436 DNAJB2P25686 324 aa11.38□□□□□ -0.59
CLCN6-202ENST00000346436 MFSD10Q14728 455 aa11.38□□□□□ -0.59
CLCN6-202ENST00000346436 KYNUQ16719 465 aa11.38□□□□□ -0.59
CLCN6-202ENST00000346436 PTF1AQ7RTS3 328 aa11.38□□□□□ -0.59
CLCN6-202ENST00000346436 AGBL1Q96MI9 1066 aa11.38□□□□□ -0.59
CLCN6-202ENST00000346436 ERP44Q9BS26 406 aa11.38□□□□□ -0.59
CLCN6-202ENST00000346436 NT5C1AQ9BXI3 368 aa11.38□□□□□ -0.59
CLCN6-202ENST00000346436 ASCC2Q9H1I8 757 aaPredicted RBP11.38□□□□□ -0.59
CLCN6-202ENST00000346436 RIOX1Q9H6W3 641 aa11.38□□□□□ -0.59
CLCN6-202ENST00000346436 SIK3Q9Y2K2 1263 aa11.38□□□□□ -0.59
CLCN6-202ENST00000346436 GSTA4O15217 222 aa11.38□□□□□ -0.59
CLCN6-202ENST00000346436 PYGLP06737 847 aa11.38□□□□□ -0.59
CLCN6-202ENST00000346436 MAP2K5Q13163 448 aa11.38□□□□□ -0.59
CLCN6-202ENST00000346436 LRIG3Q6UXM1 1119 aa11.38□□□□□ -0.59
CLCN6-202ENST00000346436 RFX8Q6ZV50 586 aa11.38□□□□□ -0.59
CLCN6-202ENST00000346436 DEPDC1BQ8WUY9 529 aa11.38□□□□□ -0.59
CLCN6-202ENST00000346436 ATG4AQ8WYN0 398 aa11.38□□□□□ -0.59
CLCN6-202ENST00000346436 SNF8Q96H20 258 aa11.38□□□□□ -0.59
CLCN6-202ENST00000346436 DDX4Q9NQI0 724 aaKnown RBP11.38□□□□□ -0.59
CLCN6-202ENST00000346436 BFARQ9NZS9 450 aa11.38□□□□□ -0.59
CLCN6-202ENST00000346436 IP6K2Q9UHH9 426 aa11.38□□□□□ -0.59
CLCN6-202ENST00000346436 TRPV2Q9Y5S1 764 aa11.38□□□□□ -0.59
CLCN6-202ENST00000346436 IGSF9BQ9UPX0 1349 aa11.38□□□□□ -0.59
CLCN6-202ENST00000346436 LOC102724159A0A0B4J2E5 919 aa11.38□□□□□ -0.59
CLCN6-202ENST00000346436 DFFAO00273 331 aa11.38□□□□□ -0.59
CLCN6-202ENST00000346436 PIK3R2O00459 728 aa11.38□□□□□ -0.59
CLCN6-202ENST00000346436 PGK2P07205 417 aa11.38□□□□□ -0.59
CLCN6-202ENST00000346436 CASP5P51878 434 aa11.38□□□□□ -0.59
CLCN6-202ENST00000346436 GEMIN4P57678 1058 aaKnown RBP11.38□□□□□ -0.59
CLCN6-202ENST00000346436 ACVR2BQ13705 512 aa11.38□□□□□ -0.59
CLCN6-202ENST00000346436 PWP2Q15269 919 aaKnown RBP11.38□□□□□ -0.59
CLCN6-202ENST00000346436 TRADDQ15628 312 aa11.38□□□□□ -0.59
CLCN6-202ENST00000346436 KDM7AQ6ZMT4 941 aa11.38□□□□□ -0.59
CLCN6-202ENST00000346436 RPAINQ86UA6 219 aa11.38□□□□□ -0.59
CLCN6-202ENST00000346436 PACS2Q86VP3 889 aa11.38□□□□□ -0.59
CLCN6-202ENST00000346436 TNFRSF25Q93038 417 aa11.38□□□□□ -0.59
CLCN6-202ENST00000346436 FBXO32Q969P5 355 aa11.38□□□□□ -0.59
CLCN6-202ENST00000346436 CCDC124Q96CT7 223 aaKnown RBP11.38□□□□□ -0.59
CLCN6-202ENST00000346436 SARS2Q9NP81 518 aaKnown RBP11.38□□□□□ -0.59
CLCN6-202ENST00000346436 MRPL17Q9NRX2 175 aaKnown RBP11.38□□□□□ -0.59
CLCN6-202ENST00000346436 TMEM51Q9NW97 253 aa11.38□□□□□ -0.59
CLCN6-202ENST00000346436 SUN2Q9UH99 717 aa11.38□□□□□ -0.59
CLCN6-202ENST00000346436 FAM107AO95990 144 aa11.38□□□□□ -0.59
CLCN6-202ENST00000346436 TTMPQ5BVD1 217 aa11.38□□□□□ -0.59
CLCN6-202ENST00000346436 ANGPTL8Q6UXH0 198 aa11.38□□□□□ -0.59
CLCN6-202ENST00000346436 COG4Q9H9E3 785 aa11.38□□□□□ -0.59
CLCN6-202ENST00000346436 CYP4F11Q9HBI6 524 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms