RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 PCYT2Q99447 389 aa14□□□□□ -0.17
CASC4-202ENST00000345795 HOMER3Q9NSC5 361 aa14□□□□□ -0.17
CASC4-202ENST00000345795 RNASELQ05823 741 aaKnown RBP14□□□□□ -0.17
CASC4-202ENST00000345795 CES3Q6UWW8 571 aa14□□□□□ -0.17
CASC4-202ENST00000345795 SIX6OS1Q8N1H7 587 aa14□□□□□ -0.17
CASC4-202ENST00000345795 DNERQ8NFT8 737 aa14□□□□□ -0.17
CASC4-202ENST00000345795 LMO3Q8TAP4 145 aa14□□□□□ -0.17
CASC4-202ENST00000345795 GDF3Q9NR23 364 aa14□□□□□ -0.17
CASC4-202ENST00000345795 IL1RAPL1Q9NZN1 696 aa14□□□□□ -0.17
CASC4-202ENST00000345795 MYH4Q9Y623 1939 aa14□□□□□ -0.17
CASC4-202ENST00000345795 A0A0B4J269 797 aa14□□□□□ -0.17
CASC4-202ENST00000345795 A0A0G2JND7 137 aa14□□□□□ -0.17
CASC4-202ENST00000345795 GMNCA6NCL1 334 aa14□□□□□ -0.17
CASC4-202ENST00000345795 CALB1P05937 261 aa14□□□□□ -0.17
CASC4-202ENST00000345795 HMBSP08397 361 aa14□□□□□ -0.17
CASC4-202ENST00000345795 RPSAP08865 295 aaKnown RBP14□□□□□ -0.17
CASC4-202ENST00000345795 DNAJC3Q13217 504 aa14□□□□□ -0.17
CASC4-202ENST00000345795 SAMD3Q8N6K7 520 aa14□□□□□ -0.17
CASC4-202ENST00000345795 TMC2Q8TDI7 906 aa14□□□□□ -0.17
CASC4-202ENST00000345795 RXFP2Q8WXD0 754 aa14□□□□□ -0.17
CASC4-202ENST00000345795 TRIM11Q96F44 468 aa14□□□□□ -0.17
CASC4-202ENST00000345795 CPXM1Q96SM3 734 aa14□□□□□ -0.17
CASC4-202ENST00000345795 HERPUD2Q9BSE4 406 aa14□□□□□ -0.17
CASC4-202ENST00000345795 EIF2AQ9BY44 585 aaKnown RBP14□□□□□ -0.17
CASC4-202ENST00000345795 TSR3Q9UJK0 312 aaKnown RBP14□□□□□ -0.17
CASC4-202ENST00000345795 HUS1O60921 280 aa13.99□□□□□ -0.17
CASC4-202ENST00000345795 RFC5P40937 340 aa13.99□□□□□ -0.17
CASC4-202ENST00000345795 SRLQ86TD4 932 aa13.99□□□□□ -0.17
CASC4-202ENST00000345795 ACO2Q99798 780 aaKnown RBP13.99□□□□□ -0.17
CASC4-202ENST00000345795 GCOM2Q9BZD3 368 aaPredicted RBP13.99□□□□□ -0.17
CASC4-202ENST00000345795 C2orf40Q9H1Z8 148 aa13.99□□□□□ -0.17
CASC4-202ENST00000345795 TUBGCP4Q9UGJ1 667 aa13.99□□□□□ -0.17
CASC4-202ENST00000345795 KCNG1Q9UIX4 513 aa13.99□□□□□ -0.17
CASC4-202ENST00000345795 MED7O43513 233 aa13.99□□□□□ -0.17
CASC4-202ENST00000345795 USP12O75317 370 aa13.99□□□□□ -0.17
CASC4-202ENST00000345795 PROSCO94903 275 aa13.99□□□□□ -0.17
CASC4-202ENST00000345795 UPP2O95045 317 aa13.99□□□□□ -0.17
CASC4-202ENST00000345795 LCA5LO95447 670 aa13.99□□□□□ -0.17
CASC4-202ENST00000345795 SLC25A27O95847 323 aa13.99□□□□□ -0.17
CASC4-202ENST00000345795 YWHAEP62258 255 aaKnown RBP13.99□□□□□ -0.17
CASC4-202ENST00000345795 PTPN11Q06124 597 aaPredicted RBP13.99□□□□□ -0.17
CASC4-202ENST00000345795 RCN2Q14257 317 aa13.99□□□□□ -0.17
CASC4-202ENST00000345795 ZC3H12AQ5D1E8 599 aaKnown RBP13.99□□□□□ -0.17
CASC4-202ENST00000345795 NIPA1Q7RTP0 329 aa13.99□□□□□ -0.17
CASC4-202ENST00000345795 DEPDC1BQ8WUY9 529 aa13.99□□□□□ -0.17
CASC4-202ENST00000345795 MAGEB5Q9BZ81 275 aa13.99□□□□□ -0.17
CASC4-202ENST00000345795 DHX33Q9H6R0 707 aaKnown RBP13.99□□□□□ -0.17
CASC4-202ENST00000345795 SCN7AQ01118 1682 aa13.99□□□□□ -0.17
CASC4-202ENST00000345795 INHBAP08476 426 aa13.99□□□□□ -0.17
CASC4-202ENST00000345795 GZMAP12544 262 aa13.99□□□□□ -0.17
CASC4-202ENST00000345795 RFX1P22670 979 aa13.99□□□□□ -0.17
CASC4-202ENST00000345795 GAD2Q05329 585 aa13.99□□□□□ -0.17
CASC4-202ENST00000345795 PTPN20Q4JDL3 420 aa13.99□□□□□ -0.17
CASC4-202ENST00000345795 SLC9A9Q8IVB4 645 aa13.99□□□□□ -0.17
CASC4-202ENST00000345795 BRSK2Q8IWQ3 736 aa13.99□□□□□ -0.17
CASC4-202ENST00000345795 MTMR14Q8NCE2 650 aa13.99□□□□□ -0.17
CASC4-202ENST00000345795 CCDC110Q8TBZ0 833 aa13.99□□□□□ -0.17
CASC4-202ENST00000345795 VIPAS39Q9H9C1 493 aa13.99□□□□□ -0.17
CASC4-202ENST00000345795 CDHR5Q9HBB8 845 aa13.99□□□□□ -0.17
CASC4-202ENST00000345795 NMRK2Q9NPI5 230 aa13.99□□□□□ -0.17
CASC4-202ENST00000345795 KIAA0391O15091 583 aaKnown RBP13.98□□□□□ -0.17
CASC4-202ENST00000345795 NOMO3P69849 1222 aa13.98□□□□□ -0.17
CASC4-202ENST00000345795 SMC6Q96SB8 1091 aa13.98□□□□□ -0.17
CASC4-202ENST00000345795 NT5C1AQ9BXI3 368 aa13.98□□□□□ -0.17
CASC4-202ENST00000345795 PABPC3Q9H361 631 aaKnown RBP13.98□□□□□ -0.17
CASC4-202ENST00000345795 C17orf75Q9HAS0 396 aa13.98□□□□□ -0.17
CASC4-202ENST00000345795 H0Y3Z8 333 aa13.98□□□□□ -0.17
CASC4-202ENST00000345795 P4HA2O15460 535 aa13.98□□□□□ -0.17
CASC4-202ENST00000345795 PECAM1P16284 738 aaPredicted RBP13.98□□□□□ -0.17
CASC4-202ENST00000345795 ACO1P21399 889 aaKnown RBP13.98□□□□□ -0.17
CASC4-202ENST00000345795 C3orf62Q6ZUJ4 267 aa13.98□□□□□ -0.17
CASC4-202ENST00000345795 LRRC34Q8IZ02 419 aa13.98□□□□□ -0.17
CASC4-202ENST00000345795 PDIK1LQ8N165 341 aa13.98□□□□□ -0.17
CASC4-202ENST00000345795 FAM136AQ96C01 138 aa13.98□□□□□ -0.17
CASC4-202ENST00000345795 NACA2Q9H009 215 aa13.98□□□□□ -0.17
CASC4-202ENST00000345795 NSRP1Q9H0G5 558 aaKnown RBP13.98□□□□□ -0.17
CASC4-202ENST00000345795 STMN4Q9H169 189 aaPredicted RBP13.98□□□□□ -0.17
CASC4-202ENST00000345795 BCORQ6W2J9 1755 aa13.98□□□□□ -0.17
CASC4-202ENST00000345795 GOLGA8TH3BQL2 631 aa13.98□□□□□ -0.17
CASC4-202ENST00000345795 ACKR2O00590 384 aa13.98□□□□□ -0.17
CASC4-202ENST00000345795 ATP9BO43861 1147 aa13.98□□□□□ -0.17
CASC4-202ENST00000345795 RECQL4O94761 1208 aa13.98□□□□□ -0.17
CASC4-202ENST00000345795 B3GAT3O94766 335 aa13.98□□□□□ -0.17
CASC4-202ENST00000345795 C4BPAP04003 597 aaKnown RBP13.98□□□□□ -0.17
CASC4-202ENST00000345795 CTCFP49711 727 aaPredicted RBP13.98□□□□□ -0.17
CASC4-202ENST00000345795 DHX34Q14147 1143 aaKnown RBP13.98□□□□□ -0.17
CASC4-202ENST00000345795 SLMAPQ14BN4 828 aa13.98□□□□□ -0.17
CASC4-202ENST00000345795 DGKDQ16760 1214 aa13.98□□□□□ -0.17
CASC4-202ENST00000345795 ENOSF1Q7L5Y1 443 aa13.98□□□□□ -0.17
CASC4-202ENST00000345795 C1orf127Q8N9H9 656 aa13.98□□□□□ -0.17
CASC4-202ENST00000345795 MICAL2O94851 1124 aa13.97□□□□□ -0.17
CASC4-202ENST00000345795 GHRP10912 638 aa13.97□□□□□ -0.17
CASC4-202ENST00000345795 MSH2P43246 934 aa13.97□□□□□ -0.17
CASC4-202ENST00000345795 MAGEA4P43358 317 aa13.97□□□□□ -0.17
CASC4-202ENST00000345795 GCNT1Q02742 428 aa13.97□□□□□ -0.17
CASC4-202ENST00000345795 BMPR2Q13873 1038 aa13.97□□□□□ -0.17
CASC4-202ENST00000345795 NFIL3Q16649 462 aa13.97□□□□□ -0.17
CASC4-202ENST00000345795 XRRA1Q6P2D8 792 aa13.97□□□□□ -0.17
CASC4-202ENST00000345795 RBM41Q96IZ5 413 aaKnown RBP13.97□□□□□ -0.17
CASC4-202ENST00000345795 PIWIL1Q96J94 861 aaKnown RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms