RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 MFSD14AQ96MC6 490 aa18.71■□□□□ 0.59
VHL-202ENST00000345392 PAFAH2Q99487 392 aa18.71■□□□□ 0.59
VHL-202ENST00000345392 TSSK1BQ9BXA7 367 aa18.71■□□□□ 0.59
VHL-202ENST00000345392 TMEM120AQ9BXJ8 343 aa18.71■□□□□ 0.59
VHL-202ENST00000345392 TMEM39BQ9GZU3 492 aa18.71■□□□□ 0.59
VHL-202ENST00000345392 KCNK13Q9HB14 408 aa18.71■□□□□ 0.59
VHL-202ENST00000345392 ZBTB12Q9Y330 459 aaPredicted RBP18.71■□□□□ 0.59
VHL-202ENST00000345392 ATP2A1O14983 1001 aa18.7■□□□□ 0.58
VHL-202ENST00000345392 RAD17O75943 681 aa18.7■□□□□ 0.58
VHL-202ENST00000345392 OCRLQ01968 901 aa18.7■□□□□ 0.58
VHL-202ENST00000345392 FNBP1LQ5T0N5 605 aa18.7■□□□□ 0.58
VHL-202ENST00000345392 ANKRD22Q5VYY1 191 aa18.7■□□□□ 0.58
VHL-202ENST00000345392 PYROXD1Q8WU10 500 aa18.7■□□□□ 0.58
VHL-202ENST00000345392 IWS1Q96ST2 819 aa18.7■□□□□ 0.58
VHL-202ENST00000345392 RANBP17Q9H2T7 1088 aaKnown RBP18.7■□□□□ 0.58
VHL-202ENST00000345392 MRPL11Q9Y3B7 192 aaKnown RBP18.7■□□□□ 0.58
VHL-202ENST00000345392 HNRNPCL1O60812 293 aaKnown RBP18.7■□□□□ 0.58
VHL-202ENST00000345392 ESRRAP11474 423 aaPredicted RBP18.7■□□□□ 0.58
VHL-202ENST00000345392 HIF1AQ16665 826 aa18.7■□□□□ 0.58
VHL-202ENST00000345392 ZNF398Q8TD17 642 aa18.7■□□□□ 0.58
VHL-202ENST00000345392 IFT43Q96FT9 208 aa18.7■□□□□ 0.58
VHL-202ENST00000345392 ST6GALNAC4Q9H4F1 302 aa18.7■□□□□ 0.58
VHL-202ENST00000345392 SYNCQ9H7C4 482 aa18.7■□□□□ 0.58
VHL-202ENST00000345392 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.7■□□□□ 0.58
VHL-202ENST00000345392 EXOC7Q9UPT5 735 aa18.7■□□□□ 0.58
VHL-202ENST00000345392 TJP3O95049 919 aa18.69■□□□□ 0.58
VHL-202ENST00000345392 UBTFL6P0CB48 400 aaPredicted RBP18.69■□□□□ 0.58
VHL-202ENST00000345392 AMPD1P23109 780 aa18.69■□□□□ 0.58
VHL-202ENST00000345392 TMEM270Q6UE05 265 aa18.69■□□□□ 0.58
VHL-202ENST00000345392 MAP4K3Q8IVH8 894 aa18.69■□□□□ 0.58
VHL-202ENST00000345392 PDCD7Q8N8D1 485 aaKnown RBP18.69■□□□□ 0.58
VHL-202ENST00000345392 TMC2Q8TDI7 906 aa18.69■□□□□ 0.58
VHL-202ENST00000345392 BSNDQ8WZ55 320 aa18.69■□□□□ 0.58
VHL-202ENST00000345392 MRPL47Q9HD33 250 aaKnown RBP18.69■□□□□ 0.58
VHL-202ENST00000345392 CCPG1Q9ULG6 757 aa18.69■□□□□ 0.58
VHL-202ENST00000345392 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.69■□□□□ 0.58
VHL-202ENST00000345392 ASTN2O75129 1339 aaPredicted RBP18.69■□□□□ 0.58
VHL-202ENST00000345392 A0A1B0GVG6 124 aa18.69■□□□□ 0.58
VHL-202ENST00000345392 F8VP50 259 aa18.69■□□□□ 0.58
VHL-202ENST00000345392 ENTPD3O75355 529 aa18.69■□□□□ 0.58
VHL-202ENST00000345392 DYNLT1P63172 113 aa18.69■□□□□ 0.58
VHL-202ENST00000345392 NOMO3P69849 1222 aa18.69■□□□□ 0.58
VHL-202ENST00000345392 NBPF20Q3BBV1 942 aa18.69■□□□□ 0.58
VHL-202ENST00000345392 FAM182AQ5T1J6 154 aa18.69■□□□□ 0.58
VHL-202ENST00000345392 RHPN2Q8IUC4 686 aa18.69■□□□□ 0.58
VHL-202ENST00000345392 KRT82Q9NSB4 513 aa18.69■□□□□ 0.58
VHL-202ENST00000345392 SNRPFP62306 86 aaKnown RBP18.68■□□□□ 0.58
VHL-202ENST00000345392 RCOR2Q8IZ40 523 aa18.68■□□□□ 0.58
VHL-202ENST00000345392 BANPQ8N9N5 519 aa18.68■□□□□ 0.58
VHL-202ENST00000345392 PPFIBP2Q8ND30 876 aa18.68■□□□□ 0.58
VHL-202ENST00000345392 TTC17Q96AE7 1141 aa18.68■□□□□ 0.58
VHL-202ENST00000345392 FGD4Q96M96 766 aa18.68■□□□□ 0.58
VHL-202ENST00000345392 WDR83Q9BRX9 315 aaKnown RBP18.68■□□□□ 0.58
VHL-202ENST00000345392 TRIM4Q9C037 500 aa18.68■□□□□ 0.58
VHL-202ENST00000345392 KMT5AQ9NQR1 393 aa18.68■□□□□ 0.58
VHL-202ENST00000345392 ZCCHC18P0CG32 403 aa18.68■□□□□ 0.58
VHL-202ENST00000345392 EIF2AK2P19525 551 aaKnown RBP18.68■□□□□ 0.58
VHL-202ENST00000345392 GCLCP48506 637 aaPredicted RBP18.68■□□□□ 0.58
VHL-202ENST00000345392 NEK3P51956 506 aa18.68■□□□□ 0.58
VHL-202ENST00000345392 WNT7BP56706 349 aa18.68■□□□□ 0.58
VHL-202ENST00000345392 CDK16Q00536 496 aa18.68■□□□□ 0.58
VHL-202ENST00000345392 OASLQ15646 514 aaKnown RBP18.68■□□□□ 0.58
VHL-202ENST00000345392 BRDTQ58F21 947 aaPredicted RBP18.68■□□□□ 0.58
VHL-202ENST00000345392 PLEKHA7Q6IQ23 1121 aa18.68■□□□□ 0.58
VHL-202ENST00000345392 ADGRD1Q6QNK2 874 aa18.68■□□□□ 0.58
VHL-202ENST00000345392 ENOSF1Q7L5Y1 443 aa18.68■□□□□ 0.58
VHL-202ENST00000345392 FEZF2Q8TBJ5 459 aa18.68■□□□□ 0.58
VHL-202ENST00000345392 SKA1Q96BD8 255 aa18.68■□□□□ 0.58
VHL-202ENST00000345392 SENP7Q9BQF6 1050 aa18.68■□□□□ 0.58
VHL-202ENST00000345392 MRIQ9BWK5 157 aa18.68■□□□□ 0.58
VHL-202ENST00000345392 STX18Q9P2W9 335 aaKnown RBP18.68■□□□□ 0.58
VHL-202ENST00000345392 HNRNPDLO14979 420 aaKnown RBP18.67■□□□□ 0.58
VHL-202ENST00000345392 BGNP21810 368 aa18.67■□□□□ 0.58
VHL-202ENST00000345392 GNA15P30679 374 aa18.67■□□□□ 0.58
VHL-202ENST00000345392 VCPP55072 806 aaKnown RBP18.67■□□□□ 0.58
VHL-202ENST00000345392 GDF10P55107 478 aa18.67■□□□□ 0.58
VHL-202ENST00000345392 AP1B1Q10567 949 aa18.67■□□□□ 0.58
VHL-202ENST00000345392 DMP1Q13316 513 aaPredicted RBP18.67■□□□□ 0.58
VHL-202ENST00000345392 MDH1BQ5I0G3 518 aa18.67■□□□□ 0.58
VHL-202ENST00000345392 SPOCD1Q6ZMY3 1216 aa18.67■□□□□ 0.58
VHL-202ENST00000345392 ALYREFQ86V81 257 aaKnown RBP18.67■□□□□ 0.58
VHL-202ENST00000345392 ZNF677Q86XU0 584 aa18.67■□□□□ 0.58
VHL-202ENST00000345392 APLFQ8IW19 511 aaPredicted RBP18.67■□□□□ 0.58
VHL-202ENST00000345392 FBXO36Q8NEA4 188 aa18.67■□□□□ 0.58
VHL-202ENST00000345392 FBXO27Q8NI29 283 aa18.67■□□□□ 0.58
VHL-202ENST00000345392 MZB1Q8WU39 189 aa18.67■□□□□ 0.58
VHL-202ENST00000345392 GATA6Q92908 595 aa18.67■□□□□ 0.58
VHL-202ENST00000345392 FAM111AQ96PZ2 611 aa18.67■□□□□ 0.58
VHL-202ENST00000345392 VPS11Q9H270 941 aa18.67■□□□□ 0.58
VHL-202ENST00000345392 PCDHB4Q9Y5E5 795 aa18.67■□□□□ 0.58
VHL-202ENST00000345392 FAM237BA0A1B0GVD1 139 aa18.67■□□□□ 0.58
VHL-202ENST00000345392 MAP3K7O43318 606 aa18.67■□□□□ 0.58
VHL-202ENST00000345392 RTN3O95197 1032 aaPredicted RBP18.67■□□□□ 0.58
VHL-202ENST00000345392 DLDP09622 509 aaKnown RBP18.67■□□□□ 0.58
VHL-202ENST00000345392 MYL2P10916 166 aa18.67■□□□□ 0.58
VHL-202ENST00000345392 TNNI1P19237 187 aa18.67■□□□□ 0.58
VHL-202ENST00000345392 PGM1P36871 562 aa18.67■□□□□ 0.58
VHL-202ENST00000345392 ARL4CP56559 192 aa18.67■□□□□ 0.58
VHL-202ENST00000345392 WDR44Q5JSH3 913 aa18.67■□□□□ 0.58
VHL-202ENST00000345392 CCDC62Q6P9F0 684 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms